MADS-box transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2106 |
| Acc16I | TGCGCA | 1 cut(s) | 1725 |
| Acc36I | ACCTGC | 1 cut(s) | 1729 |
| AccI | GTMKAC | 1 cut(s) | 870 |
| AciI | CCGC | 2 cut(s) | 1188, 2342 |
| AclI | AACGTT | 1 cut(s) | 1705 |
| AclWI | GGATC | 2 cut(s) | 629, 1495 |
| AcsI | RAATTY | 5 cut(s) | 419, 691, 934, 2011, 2333 |
| AcuI | CTGAAG | 6 cut(s) | 390, 798, 1476, 1713, 1943, 2199 |
| AfaI | GTAC | 2 cut(s) | 774, 1464 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 17, 386, 1025, 1265, 1535, 2030 |
| AflIII | ACRYGT | 3 cut(s) | 249, 309, 1740 |
| AgeI | ACCGGT | 1 cut(s) | 1390 |
| AhlI | ACTAGT | 1 cut(s) | 1352 |
| AjnI | CCWGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1143, 1175 |
| AleI | CACNNNNGTG | 1 cut(s) | 1498 |
| Alw26I | GTCTC | 4 cut(s) | 526, 590, 674, 1069 |
| AlwI | GGATC | 2 cut(s) | 629, 1495 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 96, 677 |
| Ama87I | CYCGRG | 1 cut(s) | 1066 |
| AoxI | GGCC | 2 cut(s) | 153, 1143 |
| ApeKI | GCWGC | 6 cut(s) | 347, 507, 1193, 1796, 1849, 2339 |
| ApoI | RAATTY | 5 cut(s) | 419, 691, 934, 2011, 2333 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 504, 536 |
| AseI | ATTAAT | 1 cut(s) | 1262 |
| AsiGI | ACCGGT | 1 cut(s) | 1390 |
| AspLEI | GCGC | 1 cut(s) | 1726 |
| AspS9I | GGNCC | 5 cut(s) | 153, 710, 905, 1238, 1473 |
| AsuHPI | GGTGA | 7 cut(s) | 89, 227, 915, 983, 1351, 1986, 2131 |
| AvaI | CYCGRG | 1 cut(s) | 1066 |
| AvaII | GGWCC | 4 cut(s) | 710, 905, 1238, 1473 |
| BanII | GRGCYC | 1 cut(s) | 2090 |
| BauI | CACGAG | 1 cut(s) | 2231 |
| BbsI | GAAGAC | 3 cut(s) | 924, 1079, 1610 |
| BbvCI | CCTCAGC | 1 cut(s) | 89 |
| BbvI | GCAGC | 6 cut(s) | 334, 519, 1180, 1783, 1836, 2326 |
| BceAI | ACGGC | 1 cut(s) | 378 |
| BciT130I | CCWGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| BclI | TGATCA | 1 cut(s) | 37 |
| BcoDI | GTCTC | 4 cut(s) | 526, 590, 674, 1069 |
| BcuI | ACTAGT | 1 cut(s) | 1352 |
| BfaI | CTAG | 6 cut(s) | 62, 560, 1176, 1353, 1875, 2097 |
| BfmI | CTRYAG | 2 cut(s) | 1194, 1530 |
| BfuAI | ACCTGC | 1 cut(s) | 1729 |
| BglII | AGATCT | 2 cut(s) | 365, 1564 |
| BisI | GCNGC | 6 cut(s) | 348, 508, 1194, 1797, 1850, 2340 |
| BlsI | GCNGC | 6 cut(s) | 349, 509, 1195, 1798, 1851, 2341 |
| Bme1390I | CCNGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| Bme18I | GGWCC | 4 cut(s) | 710, 905, 1238, 1473 |
| BmeT110I | CYCGRG | 1 cut(s) | 1066 |
| BmgT120I | GGNCC | 5 cut(s) | 153, 710, 905, 1238, 1473 |
| BmiI | GGNNCC | 4 cut(s) | 154, 1306, 1474, 1527 |
| BmrFI | CCNGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| BmrI | ACTGGG | 1 cut(s) | 1611 |
| BmsI | GCATC | 7 cut(s) | 277, 677, 850, 1348, 1970, 2277, 2360 |
| BmuI | ACTGGG | 1 cut(s) | 1611 |
| BpiI | GAAGAC | 3 cut(s) | 924, 1079, 1610 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 506, 538 |
| Bpu10I | CCTNAGC | 1 cut(s) | 89 |
| BpuEI | CTTGAG | 1 cut(s) | 253 |
| BsaBI | GATNNNNATC | 1 cut(s) | 204 |
| BsaI | GGTCTC | 2 cut(s) | 674, 1069 |
| BsaJI | CCNNGG | 8 cut(s) | 297, 357, 638, 1241, 1821, 1822, 2190, 2355 |
| BsaWI | WCCGGW | 1 cut(s) | 1390 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 17, 386, 1025, 1265, 1535, 2030 |
| Bse118I | RCCGGY | 1 cut(s) | 1390 |
| Bse1I | ACTGG | 4 cut(s) | 1146, 1240, 1617, 2352 |
| Bse3DI | GCAATG | 2 cut(s) | 792, 1864 |
| Bse8I | GATNNNNATC | 1 cut(s) | 204 |
| BseBI | CCWGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| BseDI | CCNNGG | 8 cut(s) | 297, 357, 638, 1241, 1821, 1822, 2190, 2355 |
| BseGI | GGATG | 6 cut(s) | 26, 135, 865, 1961, 2296, 2351 |
| BseJI | GATNNNNATC | 1 cut(s) | 204 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 17, 386, 1025, 1265, 1535, 2030 |
| BseMI | GCAATG | 2 cut(s) | 792, 1864 |
| BseMII | CTCAG | 5 cut(s) | 103, 585, 669, 1582, 1590 |
| BseNI | ACTGG | 4 cut(s) | 1146, 1240, 1617, 2352 |
| BseXI | GCAGC | 6 cut(s) | 334, 519, 1180, 1783, 1836, 2326 |
| BseYI | CCCAGC | 1 cut(s) | 533 |
| BsgI | GTGCAG | 1 cut(s) | 1782 |
| BshFI | GGCC | 2 cut(s) | 155, 1145 |
| BshTI | ACCGGT | 1 cut(s) | 1390 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1066 |
| BsiSI | CCGG | 1 cut(s) | 1391 |
| BslFI | GGGAC | 1 cut(s) | 1486 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 17, 386, 1025, 1265, 1535, 2030 |
| BsmAI | GTCTC | 4 cut(s) | 526, 590, 674, 1069 |
| BsmFI | GGGAC | 1 cut(s) | 1486 |
| BsmI | GAATGC | 1 cut(s) | 1798 |
| BsnI | GGCC | 2 cut(s) | 155, 1145 |
| Bso31I | GGTCTC | 2 cut(s) | 674, 1069 |
| BsoBI | CYCGRG | 1 cut(s) | 1066 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2090 |
| BspACI | CCGC | 2 cut(s) | 1188, 2342 |
| BspANI | GGCC | 2 cut(s) | 155, 1145 |
| BspCNI | CTCAG | 5 cut(s) | 102, 586, 670, 1581, 1591 |
| BspHI | TCATGA | 2 cut(s) | 913, 2056 |
| BspLI | GGNNCC | 4 cut(s) | 154, 1306, 1474, 1527 |
| BspMAI | CTGCAG | 1 cut(s) | 1198 |
| BspMI | ACCTGC | 1 cut(s) | 1729 |
| BspPI | GGATC | 2 cut(s) | 629, 1495 |
| BspTNI | GGTCTC | 2 cut(s) | 674, 1069 |
| BsrDI | GCAATG | 2 cut(s) | 792, 1864 |
| BsrFI | RCCGGY | 1 cut(s) | 1390 |
| BsrI | ACTGG | 4 cut(s) | 1146, 1240, 1617, 2352 |
| BssAI | RCCGGY | 1 cut(s) | 1390 |
| BssECI | CCNNGG | 8 cut(s) | 297, 357, 638, 1241, 1821, 1822, 2190, 2355 |
| BssSI | CACGAG | 1 cut(s) | 2231 |
| BssT1I | CCWWGG | 4 cut(s) | 297, 357, 2190, 2355 |
| Bst2BI | CACGAG | 1 cut(s) | 2231 |
| Bst2UI | CCWGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| Bst4CI | ACNGT | 6 cut(s) | 215, 601, 625, 665, 1159, 2038 |
| Bst6I | CTCTTC | 3 cut(s) | 472, 744, 774 |
| BstC8I | GCNNGC | 1 cut(s) | 831 |
| BstDEI | CTNAG | 9 cut(s) | 89, 492, 594, 678, 1218, 1568, 1599, 1667, 2082 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 384, 1533, 2028 |
| BstF5I | GGATG | 6 cut(s) | 26, 135, 865, 1961, 2296, 2351 |
| BstHHI | GCGC | 1 cut(s) | 1726 |
| BstMAI | GTCTC | 4 cut(s) | 526, 590, 674, 1069 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2348 |
| BstNI | CCWGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| BstNSI | RCATGY | 4 cut(s) | 253, 313, 1744, 2373 |
| BstSCI | CCNGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| BstSFI | CTRYAG | 2 cut(s) | 1194, 1530 |
| BstV1I | GCAGC | 6 cut(s) | 334, 519, 1180, 1783, 1836, 2326 |
| BstV2I | GAAGAC | 3 cut(s) | 924, 1079, 1610 |
| BstX2I | RGATCY | 3 cut(s) | 365, 1487, 1564 |
| BstYI | RGATCY | 3 cut(s) | 365, 1487, 1564 |
| BsuRI | GGCC | 2 cut(s) | 155, 1145 |
| BtsCI | GGATG | 6 cut(s) | 26, 135, 865, 1961, 2296, 2351 |
| BtsI | GCAGTG | 2 cut(s) | 997, 1900 |
| BtsIMutI | CAGTG | 4 cut(s) | 997, 1153, 1233, 1900 |
| BveI | ACCTGC | 1 cut(s) | 1729 |
| Cac8I | GCNNGC | 1 cut(s) | 831 |
| CaiI | CAGNNNCTG | 2 cut(s) | 96, 677 |
| CciI | TCATGA | 2 cut(s) | 913, 2056 |
| CfoI | GCGC | 1 cut(s) | 1726 |
| Cfr10I | RCCGGY | 1 cut(s) | 1390 |
| Cfr13I | GGNCC | 5 cut(s) | 153, 710, 905, 1238, 1473 |
| CsiI | ACCWGGT | 1 cut(s) | 706 |
| Csp6I | GTAC | 2 cut(s) | 773, 1463 |
| CspAI | ACCGGT | 1 cut(s) | 1390 |
| CviQI | GTAC | 2 cut(s) | 773, 1463 |
| DdeI | CTNAG | 9 cut(s) | 89, 492, 594, 678, 1218, 1568, 1599, 1667, 2082 |
| DraI | TTTAAA | 3 cut(s) | 418, 930, 1122 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2106 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2106 |
| Eam1104I | CTCTTC | 3 cut(s) | 472, 744, 774 |
| EarI | CTCTTC | 3 cut(s) | 472, 744, 774 |
| Eco130I | CCWWGG | 4 cut(s) | 297, 357, 2190, 2355 |
| Eco24I | GRGCYC | 1 cut(s) | 2090 |
| Eco31I | GGTCTC | 2 cut(s) | 674, 1069 |
| Eco32I | GATATC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 4 cut(s) | 710, 905, 1238, 1473 |
| Eco57I | CTGAAG | 6 cut(s) | 390, 798, 1476, 1713, 1943, 2199 |
| Eco88I | CYCGRG | 1 cut(s) | 1066 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 384, 1533, 2028 |
| EcoRII | CCWGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| EcoRV | GATATC | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 4 cut(s) | 297, 357, 2190, 2355 |
| EcoT38I | GRGCYC | 1 cut(s) | 2090 |
| ErhI | CCWWGG | 4 cut(s) | 297, 357, 2190, 2355 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2235, 2267 |
| FaqI | GGGAC | 1 cut(s) | 1486 |
| FauNDI | CATATG | 1 cut(s) | 802 |
| FbaI | TGATCA | 1 cut(s) | 37 |
| FblI | GTMKAC | 1 cut(s) | 870 |
| Fnu4HI | GCNGC | 6 cut(s) | 348, 508, 1194, 1797, 1850, 2340 |
| FokI | GGATG | 6 cut(s) | 13, 142, 872, 1948, 2283, 2338 |
| FriOI | GRGCYC | 1 cut(s) | 2090 |
| Fsp4HI | GCNGC | 6 cut(s) | 348, 508, 1194, 1797, 1850, 2340 |
| FspBI | CTAG | 6 cut(s) | 62, 560, 1176, 1353, 1875, 2097 |
| FspI | TGCGCA | 1 cut(s) | 1725 |
| GlaI | GCGC | 1 cut(s) | 1725 |
| GluI | GCNGC | 6 cut(s) | 348, 508, 1194, 1797, 1850, 2340 |
| GsaI | CCCAGC | 1 cut(s) | 537 |
| HaeIII | GGCC | 2 cut(s) | 155, 1145 |
| HapII | CCGG | 1 cut(s) | 1391 |
| HhaI | GCGC | 1 cut(s) | 1726 |
| Hin6I | GCGC | 1 cut(s) | 1724 |
| HinP1I | GCGC | 1 cut(s) | 1724 |
| HincII | GTYRAC | 1 cut(s) | 307 |
| HindII | GTYRAC | 1 cut(s) | 307 |
| HindIII | AAGCTT | 1 cut(s) | 1124 |
| HpaII | CCGG | 1 cut(s) | 1391 |
| HphI | GGTGA | 7 cut(s) | 89, 227, 915, 983, 1351, 1986, 2131 |
| Hpy166II | GTNNAC | 6 cut(s) | 307, 578, 871, 1137, 1463, 2269 |
| Hpy8I | GTNNAC | 6 cut(s) | 307, 578, 871, 1137, 1463, 2269 |
| Hpy99I | CGWCG | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 6 cut(s) | 215, 601, 625, 665, 1159, 2038 |
| HpyCH4IV | ACGT | 2 cut(s) | 771, 1705 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2348 |
| HpyF3I | CTNAG | 9 cut(s) | 89, 492, 594, 678, 1218, 1568, 1599, 1667, 2082 |
| HpySE526I | ACGT | 2 cut(s) | 771, 1705 |
| HspAI | GCGC | 1 cut(s) | 1724 |
| Ksp22I | TGATCA | 1 cut(s) | 37 |
| LmnI | GCTCC | 9 cut(s) | 98, 530, 1190, 1268, 1525, 1653, 1846, 2194, 2359 |
| Lsp1109I | GCAGC | 6 cut(s) | 334, 519, 1180, 1783, 1836, 2326 |
| LweI | GCATC | 7 cut(s) | 277, 677, 850, 1348, 1970, 2277, 2360 |
| MabI | ACCWGGT | 1 cut(s) | 706 |
| MaeI | CTAG | 6 cut(s) | 62, 560, 1176, 1353, 1875, 2097 |
| MaeII | ACGT | 2 cut(s) | 771, 1705 |
| MaeIII | GTNAC | 7 cut(s) | 77, 215, 767, 1168, 1502, 1513, 1992 |
| MflI | RGATCY | 3 cut(s) | 365, 1487, 1564 |
| MhlI | GDGCHC | 1 cut(s) | 2090 |
| MlyI | GAGTC | 5 cut(s) | 683, 761, 914, 1439, 1591 |
| MmeI | TCCRAC | 1 cut(s) | 1465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1498 |
| MspA1I | CMGCKG | 1 cut(s) | 1498 |
| MspI | CCGG | 1 cut(s) | 1391 |
| MspR9I | CCNGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| Mva1269I | GAATGC | 1 cut(s) | 1798 |
| MvaI | CCWGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2348 |
| NdeI | CATATG | 1 cut(s) | 802 |
| NlaIV | GGNNCC | 4 cut(s) | 154, 1306, 1474, 1527 |
| NmuCI | GTSAC | 5 cut(s) | 77, 215, 767, 1502, 1992 |
| NsbI | TGCGCA | 1 cut(s) | 1725 |
| NspI | RCATGY | 4 cut(s) | 253, 313, 1744, 2373 |
| OliI | CACNNNNGTG | 1 cut(s) | 1498 |
| PaeR7I | CTCGAG | 1 cut(s) | 1066 |
| PagI | TCATGA | 2 cut(s) | 913, 2056 |
| PasI | CCCWGGG | 1 cut(s) | 1822 |
| PciI | ACATGT | 3 cut(s) | 249, 309, 1740 |
| PctI | GAATGC | 1 cut(s) | 1798 |
| PfeI | GAWTC | 7 cut(s) | 461, 797, 848, 1151, 1451, 2122, 2317 |
| PfoI | TCCNGGA | 1 cut(s) | 95 |
| PinAI | ACCGGT | 1 cut(s) | 1390 |
| PkrI | GCNGC | 6 cut(s) | 349, 509, 1195, 1798, 1851, 2341 |
| PleI | GAGTC | 5 cut(s) | 682, 760, 914, 1439, 1590 |
| PpsI | GAGTC | 5 cut(s) | 682, 760, 914, 1439, 1590 |
| PscI | ACATGT | 3 cut(s) | 249, 309, 1740 |
| PshBI | ATTAAT | 1 cut(s) | 1262 |
| Psp1406I | AACGTT | 1 cut(s) | 1705 |
| Psp6I | CCWGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| PspFI | CCCAGC | 1 cut(s) | 533 |
| PspGI | CCWGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| PspN4I | GGNNCC | 4 cut(s) | 154, 1306, 1474, 1527 |
| PspPI | GGNCC | 5 cut(s) | 153, 710, 905, 1238, 1473 |
| PstI | CTGCAG | 1 cut(s) | 1198 |
| PstNI | CAGNNNCTG | 2 cut(s) | 96, 677 |
| PsuI | RGATCY | 3 cut(s) | 365, 1487, 1564 |
| PvuII | CAGCTG | 1 cut(s) | 1498 |
| RsaI | GTAC | 2 cut(s) | 774, 1464 |
| RsaNI | GTAC | 2 cut(s) | 773, 1463 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1498 |
| SatI | GCNGC | 6 cut(s) | 348, 508, 1194, 1797, 1850, 2340 |
| Sau96I | GGNCC | 5 cut(s) | 153, 710, 905, 1238, 1473 |
| SchI | GAGTC | 5 cut(s) | 683, 761, 914, 1439, 1591 |
| ScrFI | CCNGG | 5 cut(s) | 97, 639, 708, 1823, 1953 |
| SduI | GDGCHC | 1 cut(s) | 2090 |
| SexAI | ACCWGGT | 1 cut(s) | 706 |
| SfaNI | GCATC | 7 cut(s) | 277, 677, 850, 1348, 1970, 2277, 2360 |
| SfcI | CTRYAG | 2 cut(s) | 1194, 1530 |
| Sfr274I | CTCGAG | 1 cut(s) | 1066 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1390 |
| SinI | GGWCC | 4 cut(s) | 710, 905, 1238, 1473 |
| SlaI | CTCGAG | 1 cut(s) | 1066 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1498 |
| SmlI | CTYRAG | 2 cut(s) | 268, 1066 |
| SmoI | CTYRAG | 2 cut(s) | 268, 1066 |
| SpeI | ACTAGT | 1 cut(s) | 1352 |
| SsiI | CCGC | 2 cut(s) | 1188, 2342 |
| SspI | AATATT | 1 cut(s) | 1768 |
| SspMI | CTAG | 6 cut(s) | 62, 560, 1176, 1353, 1875, 2097 |
| StyD4I | CCNGG | 5 cut(s) | 95, 637, 706, 1821, 1951 |
| StyI | CCWWGG | 4 cut(s) | 297, 357, 2190, 2355 |
| TaaI | ACNGT | 6 cut(s) | 215, 601, 625, 665, 1159, 2038 |
| TaiI | ACGT | 2 cut(s) | 774, 1708 |
| TaqI | TCGA | 6 cut(s) | 210, 261, 459, 473, 555, 1067 |
| TfiI | GAWTC | 7 cut(s) | 461, 797, 848, 1151, 1451, 2122, 2317 |
| TscAI | CASTG | 4 cut(s) | 997, 1153, 1240, 1900 |
| TseFI | GTSAC | 5 cut(s) | 77, 215, 767, 1502, 1992 |
| TseI | GCWGC | 6 cut(s) | 347, 507, 1193, 1796, 1849, 2339 |
| Tsp45I | GTSAC | 5 cut(s) | 77, 215, 767, 1502, 1992 |
| TspDTI | ATGAA | 8 cut(s) | 131, 671, 927, 930, 1029, 2073, 2309, 2322 |
| TspGWI | ACGGA | 2 cut(s) | 888, 1883 |
| TspRI | CASTG | 4 cut(s) | 997, 1153, 1240, 1900 |
| VpaK11BI | GGWCC | 4 cut(s) | 710, 905, 1238, 1473 |
| VspI | ATTAAT | 1 cut(s) | 1262 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 384, 1533, 2028 |
| XapI | RAATTY | 5 cut(s) | 419, 691, 934, 2011, 2333 |
| XbaI | TCTAGA | 2 cut(s) | 61, 2096 |
| XceI | RCATGY | 4 cut(s) | 253, 313, 1744, 2373 |
| XhoI | CTCGAG | 1 cut(s) | 1066 |
| XmiI | GTMKAC | 1 cut(s) | 870 |
| XspI | CTAG | 6 cut(s) | 62, 560, 1176, 1353, 1875, 2097 |