Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 541 |
| AcuI | CTGAAG | 1 cut(s) | 388 |
| AfaI | GTAC | 4 cut(s) | 67, 118, 189, 569 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 244 |
| AflII | CTTAAG | 1 cut(s) | 253 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AgsI | TTSAA | 3 cut(s) | 311, 383, 412 |
| AjnI | CCWGG | 2 cut(s) | 44, 190 |
| AluBI | AGCT | 2 cut(s) | 182, 511 |
| AluI | AGCT | 2 cut(s) | 182, 511 |
| Alw21I | GWGCWC | 1 cut(s) | 301 |
| Alw44I | GTGCAC | 1 cut(s) | 297 |
| AoxI | GGCC | 1 cut(s) | 484 |
| ApaLI | GTGCAC | 1 cut(s) | 297 |
| AspS9I | GGNCC | 2 cut(s) | 145, 484 |
| AsuHPI | GGTGA | 2 cut(s) | 34, 287 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BaeGI | GKGCMC | 1 cut(s) | 301 |
| BauI | CACGAG | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 1 cut(s) | 301 |
| BccI | CCATC | 1 cut(s) | 165 |
| BciT130I | CCWGG | 2 cut(s) | 46, 192 |
| BfaI | CTAG | 1 cut(s) | 528 |
| BfrI | CTTAAG | 1 cut(s) | 253 |
| BfuAI | ACCTGC | 1 cut(s) | 541 |
| Bme1390I | CCNGG | 2 cut(s) | 46, 192 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 2 cut(s) | 145, 484 |
| BmiI | GGNNCC | 3 cut(s) | 146, 147, 485 |
| BmrFI | CCNGG | 2 cut(s) | 46, 192 |
| BmrI | ACTGGG | 1 cut(s) | 150 |
| BmsI | GCATC | 2 cut(s) | 137, 462 |
| BmuI | ACTGGG | 1 cut(s) | 150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 419, 451 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 352, 382 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 244 |
| Bse1I | ACTGG | 3 cut(s) | 95, 145, 277 |
| BseBI | CCWGG | 2 cut(s) | 46, 192 |
| BseGI | GGATG | 1 cut(s) | 128 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 244 |
| BseNI | ACTGG | 3 cut(s) | 95, 145, 277 |
| BseSI | GKGCMC | 1 cut(s) | 301 |
| BshFI | GGCC | 1 cut(s) | 486 |
| BsiHKAI | GWGCWC | 1 cut(s) | 301 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 244 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| BsmI | GAATGC | 1 cut(s) | 341 |
| BsnI | GGCC | 1 cut(s) | 486 |
| Bsp1286I | GDGCHC | 1 cut(s) | 301 |
| Bsp143I | GATC | 1 cut(s) | 34 |
| BspANI | GGCC | 1 cut(s) | 486 |
| BspLI | GGNNCC | 3 cut(s) | 146, 147, 485 |
| BspMI | ACCTGC | 1 cut(s) | 541 |
| BspTI | CTTAAG | 1 cut(s) | 253 |
| BsrI | ACTGG | 3 cut(s) | 95, 145, 277 |
| BssMI | GATC | 1 cut(s) | 34 |
| BssSI | CACGAG | 1 cut(s) | 99 |
| Bst2BI | CACGAG | 1 cut(s) | 99 |
| Bst2UI | CCWGG | 2 cut(s) | 46, 192 |
| Bst4CI | ACNGT | 1 cut(s) | 121 |
| BstAFI | CTTAAG | 1 cut(s) | 253 |
| BstC8I | GCNNGC | 3 cut(s) | 126, 219, 432 |
| BstF5I | GGATG | 1 cut(s) | 128 |
| BstKTI | GATC | 1 cut(s) | 37 |
| BstMBI | GATC | 1 cut(s) | 34 |
| BstNI | CCWGG | 2 cut(s) | 46, 192 |
| BstNSI | RCATGY | 1 cut(s) | 326 |
| BstSCI | CCNGG | 2 cut(s) | 44, 190 |
| BstSLI | GKGCMC | 1 cut(s) | 301 |
| BsuRI | GGCC | 1 cut(s) | 486 |
| BtsCI | GGATG | 1 cut(s) | 128 |
| BtsI | GCAGTG | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 3 cut(s) | 270, 360, 464 |
| BveI | ACCTGC | 1 cut(s) | 541 |
| Cac8I | GCNNGC | 3 cut(s) | 126, 219, 432 |
| Cfr13I | GGNCC | 2 cut(s) | 145, 484 |
| Csp6I | GTAC | 4 cut(s) | 66, 117, 188, 568 |
| CviAII | CATG | 1 cut(s) | 323 |
| CviJI | RGCY | 9 cut(s) | 40, 52, 156, 182, 252, 353, 434, 486, 511 |
| CviKI_1 | RGCY | 9 cut(s) | 40, 52, 156, 182, 252, 353, 434, 486, 511 |
| CviQI | GTAC | 4 cut(s) | 66, 117, 188, 568 |
| DpnI | GATC | 1 cut(s) | 36 |
| DpnII | GATC | 1 cut(s) | 34 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 388 |
| EcoO109I | RGGNCCY | 2 cut(s) | 145, 484 |
| EcoRII | CCWGG | 2 cut(s) | 44, 190 |
| FaeI | CATG | 1 cut(s) | 326 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| FatI | CATG | 1 cut(s) | 322 |
| FauNDI | CATATG | 1 cut(s) | 206 |
| FokI | GGATG | 1 cut(s) | 115 |
| FspBI | CTAG | 1 cut(s) | 528 |
| HaeIII | GGCC | 1 cut(s) | 486 |
| Hin1II | CATG | 1 cut(s) | 326 |
| HinfI | GANTC | 1 cut(s) | 311 |
| HphI | GGTGA | 2 cut(s) | 34, 287 |
| Hpy166II | GTNNAC | 1 cut(s) | 299 |
| Hpy188III | TCNNGA | 3 cut(s) | 101, 514, 528 |
| Hpy8I | GTNNAC | 1 cut(s) | 299 |
| HpyAV | CCTTC | 2 cut(s) | 242, 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 121 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 299 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| Hsp92II | CATG | 1 cut(s) | 326 |
| KflI | GGGWCCC | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 34 |
| LmnI | GCTCC | 2 cut(s) | 240, 427 |
| LweI | GCATC | 2 cut(s) | 137, 462 |
| MaeI | CTAG | 1 cut(s) | 528 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MaeIII | GTNAC | 2 cut(s) | 266, 391 |
| MalI | GATC | 1 cut(s) | 36 |
| MboI | GATC | 1 cut(s) | 34 |
| MhlI | GDGCHC | 1 cut(s) | 301 |
| MluCI | AATT | 2 cut(s) | 384, 543 |
| MmeI | TCCRAC | 1 cut(s) | 405 |
| MnlI | CCTC | 3 cut(s) | 142, 378, 445 |
| MseI | TTAA | 1 cut(s) | 254 |
| MspCI | CTTAAG | 1 cut(s) | 253 |
| MspR9I | CCNGG | 2 cut(s) | 46, 192 |
| Mva1269I | GAATGC | 1 cut(s) | 341 |
| MvaI | CCWGG | 2 cut(s) | 46, 192 |
| NdeI | CATATG | 1 cut(s) | 206 |
| NdeII | GATC | 1 cut(s) | 34 |
| NlaIII | CATG | 1 cut(s) | 326 |
| NlaIV | GGNNCC | 3 cut(s) | 146, 147, 485 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| NspI | RCATGY | 1 cut(s) | 326 |
| PciI | ACATGT | 1 cut(s) | 322 |
| PctI | GAATGC | 1 cut(s) | 341 |
| PfeI | GAWTC | 1 cut(s) | 311 |
| PpuMI | RGGWCCY | 1 cut(s) | 145 |
| PscI | ACATGT | 1 cut(s) | 322 |
| Psp5II | RGGWCCY | 1 cut(s) | 145 |
| Psp6I | CCWGG | 2 cut(s) | 44, 190 |
| PspGI | CCWGG | 2 cut(s) | 44, 190 |
| PspN4I | GGNNCC | 3 cut(s) | 146, 147, 485 |
| PspPI | GGNCC | 2 cut(s) | 145, 484 |
| PspPPI | RGGWCCY | 1 cut(s) | 145 |
| RsaI | GTAC | 4 cut(s) | 67, 118, 189, 569 |
| RsaNI | GTAC | 4 cut(s) | 66, 117, 188, 568 |
| SaqAI | TTAA | 1 cut(s) | 254 |
| Sau3AI | GATC | 1 cut(s) | 34 |
| Sau96I | GGNCC | 2 cut(s) | 145, 484 |
| ScrFI | CCNGG | 2 cut(s) | 46, 192 |
| SduI | GDGCHC | 1 cut(s) | 301 |
| SetI | ASST | 9 cut(s) | 47, 67, 71, 184, 193, 268, 309, 513, 535 |
| SfaNI | GCATC | 2 cut(s) | 137, 462 |
| SinI | GGWCC | 1 cut(s) | 145 |
| SmlI | CTYRAG | 1 cut(s) | 253 |
| SmoI | CTYRAG | 1 cut(s) | 253 |
| Sse9I | AATT | 2 cut(s) | 384, 543 |
| SspMI | CTAG | 1 cut(s) | 528 |
| StyD4I | CCNGG | 2 cut(s) | 44, 190 |
| TaaI | ACNGT | 1 cut(s) | 121 |
| TaiI | ACGT | 1 cut(s) | 71 |
| TasI | AATT | 2 cut(s) | 384, 543 |
| TfiI | GAWTC | 1 cut(s) | 311 |
| Tru1I | TTAA | 1 cut(s) | 254 |
| Tru9I | TTAA | 1 cut(s) | 254 |
| TscAI | CASTG | 3 cut(s) | 277, 367, 471 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspRI | CASTG | 3 cut(s) | 277, 367, 471 |
| Vha464I | CTTAAG | 1 cut(s) | 253 |
| VneI | GTGCAC | 1 cut(s) | 297 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XbaI | TCTAGA | 1 cut(s) | 527 |
| XceI | RCATGY | 1 cut(s) | 326 |
| XspI | CTAG | 1 cut(s) | 528 |