Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 168 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 289 |
| AcsI | RAATTY | 1 cut(s) | 198 |
| AcuI | CTGAAG | 1 cut(s) | 170 |
| AfaI | GTAC | 1 cut(s) | 357 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 289 |
| AflIII | ACRYGT | 1 cut(s) | 58 |
| AgsI | TTSAA | 3 cut(s) | 17, 65, 329 |
| AluBI | AGCT | 5 cut(s) | 20, 31, 86, 229, 296 |
| AluI | AGCT | 5 cut(s) | 20, 31, 86, 229, 296 |
| Alw21I | GWGCWC | 1 cut(s) | 231 |
| Alw26I | GTCTC | 1 cut(s) | 125 |
| ApeKI | GCWGC | 6 cut(s) | 83, 115, 163, 293, 341, 349 |
| ApoI | RAATTY | 1 cut(s) | 198 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 124, 156 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BanII | GRGCYC | 1 cut(s) | 231 |
| Bbv12I | GWGCWC | 1 cut(s) | 231 |
| BbvI | GCAGC | 5 cut(s) | 95, 127, 150, 305, 328 |
| BcoDI | GTCTC | 1 cut(s) | 125 |
| BfaI | CTAG | 1 cut(s) | 32 |
| BfuAI | ACCTGC | 1 cut(s) | 168 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 275 |
| BglII | AGATCT | 1 cut(s) | 220 |
| BisI | GCNGC | 6 cut(s) | 84, 116, 164, 294, 342, 350 |
| BlpI | GCTNAGC | 1 cut(s) | 345 |
| BlsI | GCNGC | 6 cut(s) | 85, 117, 165, 295, 343, 351 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BpmI | CTGGAG | 1 cut(s) | 245 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 345 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 95, 125 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 289 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BseRI | GAGGAG | 1 cut(s) | 172 |
| BseXI | GCAGC | 5 cut(s) | 95, 127, 150, 305, 328 |
| BsiHKAI | GWGCWC | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 289 |
| BsmAI | GTCTC | 1 cut(s) | 125 |
| BsmBI | CGTCTC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 231 |
| Bsp143I | GATC | 3 cut(s) | 37, 208, 220 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 345 |
| BspMI | ACCTGC | 1 cut(s) | 168 |
| BssMI | GATC | 3 cut(s) | 37, 208, 220 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 160, 299 |
| BstDEI | CTNAG | 1 cut(s) | 345 |
| BstKTI | GATC | 3 cut(s) | 40, 211, 223 |
| BstMAI | GTCTC | 1 cut(s) | 125 |
| BstMBI | GATC | 3 cut(s) | 37, 208, 220 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 80, 89, 160, 250, 275, 299 |
| BstNSI | RCATGY | 2 cut(s) | 62, 257 |
| BstV1I | GCAGC | 5 cut(s) | 95, 127, 150, 305, 328 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| BveI | ACCTGC | 1 cut(s) | 168 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| Csp6I | GTAC | 1 cut(s) | 356 |
| CviAII | CATG | 3 cut(s) | 59, 254, 299 |
| CviJI | RGCY | 9 cut(s) | 20, 31, 74, 86, 118, 229, 269, 296, 352 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 31, 74, 86, 118, 229, 269, 296, 352 |
| CviQI | GTAC | 1 cut(s) | 356 |
| DdeI | CTNAG | 1 cut(s) | 345 |
| DpnI | GATC | 3 cut(s) | 39, 210, 222 |
| DpnII | GATC | 3 cut(s) | 37, 208, 220 |
| Ecl136II | GAGCTC | 1 cut(s) | 229 |
| Eco24I | GRGCYC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco53kI | GAGCTC | 1 cut(s) | 229 |
| Eco57I | CTGAAG | 1 cut(s) | 170 |
| EcoICRI | GAGCTC | 1 cut(s) | 229 |
| EcoT22I | ATGCAT | 1 cut(s) | 255 |
| EcoT38I | GRGCYC | 1 cut(s) | 231 |
| Esp3I | CGTCTC | 1 cut(s) | 125 |
| FaeI | CATG | 3 cut(s) | 62, 257, 302 |
| FaiI | YATR | 9 cut(s) | 42, 44, 60, 125, 204, 242, 251, 255, 300 |
| FatI | CATG | 3 cut(s) | 58, 253, 298 |
| FauNDI | CATATG | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 6 cut(s) | 84, 116, 164, 294, 342, 350 |
| FriOI | GRGCYC | 1 cut(s) | 231 |
| Fsp4HI | GCNGC | 6 cut(s) | 84, 116, 164, 294, 342, 350 |
| FspBI | CTAG | 1 cut(s) | 32 |
| GluI | GCNGC | 6 cut(s) | 84, 116, 164, 294, 342, 350 |
| GsuI | CTGGAG | 1 cut(s) | 245 |
| Hin1II | CATG | 3 cut(s) | 62, 257, 302 |
| Hpy188I | TCNGA | 1 cut(s) | 362 |
| Hpy188III | TCNNGA | 2 cut(s) | 148, 224 |
| HpyCH4V | TGCA | 4 cut(s) | 46, 115, 166, 253 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 80, 89, 160, 250, 275, 299 |
| HpyF3I | CTNAG | 1 cut(s) | 345 |
| Hsp92II | CATG | 3 cut(s) | 62, 257, 302 |
| Kzo9I | GATC | 3 cut(s) | 37, 208, 220 |
| LmnI | GCTCC | 1 cut(s) | 226 |
| LpnPI | CCDG | 3 cut(s) | 161, 173, 209 |
| Lsp1109I | GCAGC | 5 cut(s) | 95, 127, 150, 305, 328 |
| MaeI | CTAG | 1 cut(s) | 32 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MalI | GATC | 3 cut(s) | 39, 210, 222 |
| MboI | GATC | 3 cut(s) | 37, 208, 220 |
| MboII | GAAGA | 2 cut(s) | 207, 230 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MhlI | GDGCHC | 1 cut(s) | 231 |
| MluCI | AATT | 4 cut(s) | 198, 246, 271, 336 |
| MnlI | CCTC | 2 cut(s) | 193, 328 |
| Mph1103I | ATGCAT | 1 cut(s) | 255 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 80, 89, 160, 250, 275, 299 |
| NdeI | CATATG | 1 cut(s) | 42 |
| NdeII | GATC | 3 cut(s) | 37, 208, 220 |
| NlaIII | CATG | 3 cut(s) | 62, 257, 302 |
| NsiI | ATGCAT | 1 cut(s) | 255 |
| NspI | RCATGY | 2 cut(s) | 62, 257 |
| PciI | ACATGT | 1 cut(s) | 58 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 289 |
| PkrI | GCNGC | 6 cut(s) | 85, 117, 165, 295, 343, 351 |
| PscI | ACATGT | 1 cut(s) | 58 |
| Psp124BI | GAGCTC | 1 cut(s) | 231 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| PvuII | CAGCTG | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 357 |
| RsaNI | GTAC | 1 cut(s) | 356 |
| SacI | GAGCTC | 1 cut(s) | 231 |
| SatI | GCNGC | 6 cut(s) | 84, 116, 164, 294, 342, 350 |
| Sau3AI | GATC | 3 cut(s) | 37, 208, 220 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SduI | GDGCHC | 1 cut(s) | 231 |
| SetI | ASST | 8 cut(s) | 22, 33, 88, 113, 162, 231, 288, 298 |
| SinI | GGWCC | 1 cut(s) | 145 |
| Sse9I | AATT | 4 cut(s) | 198, 246, 271, 336 |
| SspMI | CTAG | 1 cut(s) | 32 |
| SstI | GAGCTC | 1 cut(s) | 231 |
| TasI | AATT | 4 cut(s) | 198, 246, 271, 336 |
| TatI | WGTACW | 1 cut(s) | 355 |
| TseI | GCWGC | 6 cut(s) | 83, 115, 163, 293, 341, 349 |
| TspDTI | ATGAA | 1 cut(s) | 231 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 289 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XapI | RAATTY | 1 cut(s) | 198 |
| XceI | RCATGY | 2 cut(s) | 62, 257 |
| XspI | CTAG | 1 cut(s) | 32 |
| Zsp2I | ATGCAT | 1 cut(s) | 255 |