Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 322, 360 |
| AciI | CCGC | 1 cut(s) | 188 |
| AfaI | GTAC | 1 cut(s) | 63 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 400 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 50 |
| AluBI | AGCT | 1 cut(s) | 230 |
| AluI | AGCT | 1 cut(s) | 230 |
| Alw21I | GWGCWC | 1 cut(s) | 386 |
| Alw26I | GTCTC | 2 cut(s) | 37, 340 |
| Ama87I | CYCGRG | 1 cut(s) | 385 |
| AoxI | GGCC | 1 cut(s) | 26 |
| ApeKI | GCWGC | 3 cut(s) | 116, 185, 242 |
| AspLEI | GCGC | 2 cut(s) | 36, 213 |
| AsuHPI | GGTGA | 3 cut(s) | 212, 263, 301 |
| AvaI | CYCGRG | 1 cut(s) | 385 |
| BaeGI | GKGCMC | 2 cut(s) | 327, 365 |
| BanI | GGYRCC | 2 cut(s) | 322, 360 |
| Bbv12I | GWGCWC | 1 cut(s) | 386 |
| BbvI | GCAGC | 3 cut(s) | 103, 197, 254 |
| BccI | CCATC | 1 cut(s) | 312 |
| BcoDI | GTCTC | 2 cut(s) | 37, 340 |
| BisI | GCNGC | 3 cut(s) | 117, 186, 243 |
| BlsI | GCNGC | 3 cut(s) | 118, 187, 244 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 50 |
| BmeT110I | CYCGRG | 1 cut(s) | 385 |
| BmiI | GGNNCC | 2 cut(s) | 324, 362 |
| BmrI | ACTGGG | 1 cut(s) | 366 |
| BmuI | ACTGGG | 1 cut(s) | 366 |
| BsaAI | YACGTR | 1 cut(s) | 40 |
| BsaJI | CCNNGG | 2 cut(s) | 120, 147 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bse1I | ACTGG | 1 cut(s) | 361 |
| Bse3DI | GCAATG | 1 cut(s) | 29 |
| BseDI | CCNNGG | 2 cut(s) | 120, 147 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseMI | GCAATG | 1 cut(s) | 29 |
| BseNI | ACTGG | 1 cut(s) | 361 |
| BseSI | GKGCMC | 2 cut(s) | 327, 365 |
| BseXI | GCAGC | 3 cut(s) | 103, 197, 254 |
| BshFI | GGCC | 1 cut(s) | 28 |
| BshNI | GGYRCC | 2 cut(s) | 322, 360 |
| BsiHKAI | GWGCWC | 1 cut(s) | 386 |
| BsiHKCI | CYCGRG | 1 cut(s) | 385 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BsmAI | GTCTC | 2 cut(s) | 37, 340 |
| BsnI | GGCC | 1 cut(s) | 28 |
| BsoBI | CYCGRG | 1 cut(s) | 385 |
| Bsp1286I | GDGCHC | 3 cut(s) | 327, 365, 386 |
| Bsp143I | GATC | 2 cut(s) | 268, 291 |
| Bsp19I | CCATGG | 1 cut(s) | 120 |
| BspACI | CCGC | 1 cut(s) | 188 |
| BspANI | GGCC | 1 cut(s) | 28 |
| BspLI | GGNNCC | 2 cut(s) | 324, 362 |
| BspT107I | GGYRCC | 2 cut(s) | 322, 360 |
| BsrDI | GCAATG | 1 cut(s) | 29 |
| BsrI | ACTGG | 1 cut(s) | 361 |
| BssECI | CCNNGG | 2 cut(s) | 120, 147 |
| BssMI | GATC | 2 cut(s) | 268, 291 |
| BssT1I | CCWWGG | 1 cut(s) | 120 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| Bst6I | CTCTTC | 1 cut(s) | 306 |
| BstBAI | YACGTR | 1 cut(s) | 40 |
| BstDEI | CTNAG | 1 cut(s) | 55 |
| BstDSI | CCRYGG | 1 cut(s) | 120 |
| BstHHI | GCGC | 2 cut(s) | 36, 213 |
| BstKTI | GATC | 2 cut(s) | 271, 294 |
| BstMAI | GTCTC | 2 cut(s) | 37, 340 |
| BstMBI | GATC | 2 cut(s) | 268, 291 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 185 |
| BstSLI | GKGCMC | 2 cut(s) | 327, 365 |
| BstV1I | GCAGC | 3 cut(s) | 103, 197, 254 |
| BsuRI | GGCC | 1 cut(s) | 28 |
| BtgI | CCRYGG | 1 cut(s) | 120 |
| CfoI | GCGC | 2 cut(s) | 36, 213 |
| Csp6I | GTAC | 1 cut(s) | 62 |
| CviAII | CATG | 4 cut(s) | 5, 121, 197, 224 |
| CviJI | RGCY | 4 cut(s) | 13, 28, 179, 230 |
| CviKI_1 | RGCY | 4 cut(s) | 13, 28, 179, 230 |
| CviQI | GTAC | 1 cut(s) | 62 |
| DdeI | CTNAG | 1 cut(s) | 55 |
| DpnI | GATC | 2 cut(s) | 270, 293 |
| DpnII | GATC | 2 cut(s) | 268, 291 |
| DriI | GACNNNNNGTC | 1 cut(s) | 50 |
| Eam1104I | CTCTTC | 1 cut(s) | 306 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 50 |
| EarI | CTCTTC | 1 cut(s) | 306 |
| Eco130I | CCWWGG | 1 cut(s) | 120 |
| Eco88I | CYCGRG | 1 cut(s) | 385 |
| EcoT14I | CCWWGG | 1 cut(s) | 120 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 120 |
| FaeI | CATG | 4 cut(s) | 8, 124, 200, 227 |
| FaiI | YATR | 9 cut(s) | 6, 122, 198, 203, 216, 225, 329, 354, 409 |
| FatI | CATG | 4 cut(s) | 4, 120, 196, 223 |
| Fnu4HI | GCNGC | 3 cut(s) | 117, 186, 243 |
| Fsp4HI | GCNGC | 3 cut(s) | 117, 186, 243 |
| GlaI | GCGC | 2 cut(s) | 35, 212 |
| GluI | GCNGC | 3 cut(s) | 117, 186, 243 |
| HaeIII | GGCC | 1 cut(s) | 28 |
| HhaI | GCGC | 2 cut(s) | 36, 213 |
| Hin1II | CATG | 4 cut(s) | 8, 124, 200, 227 |
| Hin6I | GCGC | 2 cut(s) | 34, 211 |
| HinP1I | GCGC | 2 cut(s) | 34, 211 |
| HphI | GGTGA | 3 cut(s) | 212, 263, 301 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 2 cut(s) | 91, 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 174, 185, 284, 352 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 185 |
| HpyF3I | CTNAG | 1 cut(s) | 55 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Hsp92II | CATG | 4 cut(s) | 8, 124, 200, 227 |
| HspAI | GCGC | 2 cut(s) | 34, 211 |
| Kzo9I | GATC | 2 cut(s) | 268, 291 |
| LpnPI | CCDG | 2 cut(s) | 342, 378 |
| Lsp1109I | GCAGC | 3 cut(s) | 103, 197, 254 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MaeIII | GTNAC | 1 cut(s) | 95 |
| MalI | GATC | 2 cut(s) | 270, 293 |
| MboI | GATC | 2 cut(s) | 268, 291 |
| MboII | GAAGA | 2 cut(s) | 146, 323 |
| MhlI | GDGCHC | 3 cut(s) | 327, 365, 386 |
| MluCI | AATT | 2 cut(s) | 279, 395 |
| MmeI | TCCRAC | 1 cut(s) | 256 |
| MnlI | CCTC | 6 cut(s) | 18, 142, 242, 280, 297, 301 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 185 |
| NcoI | CCATGG | 1 cut(s) | 120 |
| NdeII | GATC | 2 cut(s) | 268, 291 |
| NlaIII | CATG | 4 cut(s) | 8, 124, 200, 227 |
| NlaIV | GGNNCC | 2 cut(s) | 324, 362 |
| NmuCI | GTSAC | 1 cut(s) | 95 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PaeR7I | CTCGAG | 1 cut(s) | 385 |
| PkrI | GCNGC | 3 cut(s) | 118, 187, 244 |
| Ppu21I | YACGTR | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 2 cut(s) | 324, 362 |
| PspXI | VCTCGAGB | 1 cut(s) | 385 |
| RsaI | GTAC | 1 cut(s) | 63 |
| RsaNI | GTAC | 1 cut(s) | 62 |
| SatI | GCNGC | 3 cut(s) | 117, 186, 243 |
| Sau3AI | GATC | 2 cut(s) | 268, 291 |
| SduI | GDGCHC | 3 cut(s) | 327, 365, 386 |
| SetI | ASST | 5 cut(s) | 42, 153, 232, 253, 291 |
| Sfr274I | CTCGAG | 1 cut(s) | 385 |
| SlaI | CTCGAG | 1 cut(s) | 385 |
| SmlI | CTYRAG | 1 cut(s) | 385 |
| SmoI | CTYRAG | 1 cut(s) | 385 |
| Sse9I | AATT | 2 cut(s) | 279, 395 |
| SsiI | CCGC | 1 cut(s) | 188 |
| StyI | CCWWGG | 1 cut(s) | 120 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TaqI | TCGA | 3 cut(s) | 90, 161, 386 |
| TasI | AATT | 2 cut(s) | 279, 395 |
| TatI | WGTACW | 1 cut(s) | 61 |
| TseFI | GTSAC | 1 cut(s) | 95 |
| TseI | GCWGC | 3 cut(s) | 116, 185, 242 |
| Tsp45I | GTSAC | 1 cut(s) | 95 |
| TspDTI | ATGAA | 2 cut(s) | 185, 240 |
| XhoI | CTCGAG | 1 cut(s) | 385 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |