Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1916 |
| Acc36I | ACCTGC | 5 cut(s) | 991, 1711, 1789, 1817, 1916 |
| AccB1I | GGYRCC | 2 cut(s) | 1546, 1853 |
| AccII | CGCG | 1 cut(s) | 1528 |
| AccIII | TCCGGA | 1 cut(s) | 1213 |
| AciI | CCGC | 3 cut(s) | 1163, 1193, 1935 |
| AclWI | GGATC | 2 cut(s) | 233, 1031 |
| AcoI | YGGCCR | 2 cut(s) | 88, 450 |
| AcsI | RAATTY | 5 cut(s) | 231, 732, 1057, 1153, 2014 |
| AdeI | CACNNNGTG | 1 cut(s) | 1631 |
| AfaI | GTAC | 5 cut(s) | 8, 71, 1015, 1386, 1899 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 119, 133, 1370, 1375, 1456, 1790, 1826, 2056 |
| AflII | CTTAAG | 1 cut(s) | 1835 |
| AflIII | ACRYGT | 3 cut(s) | 1387, 1526, 1871 |
| AgsI | TTSAA | 6 cut(s) | 337, 458, 1071, 1151, 2039, 2063 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 142 |
| AhlI | ACTAGT | 2 cut(s) | 1307, 1963 |
| AjiI | CACGTC | 1 cut(s) | 1874 |
| AjnI | CCWGG | 2 cut(s) | 1369, 2254 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 721, 753 |
| AleI | CACNNNNGTG | 2 cut(s) | 62, 1919 |
| Alw21I | GWGCWC | 3 cut(s) | 247, 695, 1305 |
| Alw26I | GTCTC | 2 cut(s) | 835, 1484 |
| AlwI | GGATC | 2 cut(s) | 233, 1031 |
| Aor13HI | TCCGGA | 1 cut(s) | 1213 |
| AoxI | GGCC | 5 cut(s) | 88, 297, 450, 1052, 1974 |
| ApeKI | GCWGC | 4 cut(s) | 711, 1358, 1717, 1957 |
| ApoI | RAATTY | 5 cut(s) | 231, 732, 1057, 1153, 2014 |
| AseI | ATTAAT | 1 cut(s) | 84 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1155 |
| AspLEI | GCGC | 1 cut(s) | 619 |
| AspS9I | GGNCC | 2 cut(s) | 136, 1082 |
| AsuC2I | CCSGG | 1 cut(s) | 858 |
| AsuHPI | GGTGA | 5 cut(s) | 138, 224, 248, 880, 1852 |
| AsuNHI | GCTAGC | 2 cut(s) | 2185, 2197 |
| AvaII | GGWCC | 2 cut(s) | 136, 1082 |
| AxyI | CCTNAGG | 1 cut(s) | 411 |
| BalI | TGGCCA | 2 cut(s) | 90, 452 |
| BanI | GGYRCC | 2 cut(s) | 1546, 1853 |
| BauI | CACGAG | 1 cut(s) | 1629 |
| Bbv12I | GWGCWC | 3 cut(s) | 247, 695, 1305 |
| BbvCI | CCTCAGC | 1 cut(s) | 171 |
| BbvI | GCAGC | 4 cut(s) | 723, 1370, 1729, 1969 |
| BccI | CCATC | 9 cut(s) | 267, 637, 831, 990, 1108, 1115, 1454, 1844, 2072 |
| BceAI | ACGGC | 1 cut(s) | 1792 |
| BciT130I | CCWGG | 2 cut(s) | 1371, 2256 |
| BciVI | GTATCC | 1 cut(s) | 864 |
| BclI | TGATCA | 1 cut(s) | 1861 |
| BcnI | CCSGG | 1 cut(s) | 858 |
| BcoDI | GTCTC | 2 cut(s) | 835, 1484 |
| BcuI | ACTAGT | 2 cut(s) | 1307, 1963 |
| BfmI | CTRYAG | 3 cut(s) | 218, 1824, 2051 |
| BfrI | CTTAAG | 1 cut(s) | 1835 |
| BfuAI | ACCTGC | 5 cut(s) | 991, 1711, 1789, 1817, 1916 |
| BfuI | GTATCC | 1 cut(s) | 864 |
| BisI | GCNGC | 4 cut(s) | 712, 1359, 1718, 1958 |
| BlsI | GCNGC | 4 cut(s) | 713, 1360, 1719, 1959 |
| Bme1390I | CCNGG | 3 cut(s) | 858, 1371, 2256 |
| Bme18I | GGWCC | 2 cut(s) | 136, 1082 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 142 |
| BmgBI | CACGTC | 1 cut(s) | 1874 |
| BmgT120I | GGNCC | 2 cut(s) | 136, 1082 |
| BmiI | GGNNCC | 5 cut(s) | 137, 138, 1084, 1548, 1855 |
| BmrFI | CCNGG | 3 cut(s) | 858, 1371, 2256 |
| BmrI | ACTGGG | 1 cut(s) | 1445 |
| BmsI | GCATC | 2 cut(s) | 362, 1894 |
| BmtI | GCTAGC | 2 cut(s) | 2189, 2201 |
| BmuI | ACTGGG | 1 cut(s) | 1445 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 164, 196, 1804, 1836 |
| BpmI | CTGGAG | 3 cut(s) | 970, 2010, 2277 |
| Bpu10I | CCTNAGC | 1 cut(s) | 171 |
| BpuEI | CTTGAG | 2 cut(s) | 562, 598 |
| BpuMI | CCSGG | 1 cut(s) | 858 |
| Bsa29I | ATCGAT | 1 cut(s) | 1848 |
| BsaAI | YACGTR | 1 cut(s) | 197 |
| BsaBI | GATNNNNATC | 1 cut(s) | 681 |
| BsaI | GGTCTC | 1 cut(s) | 1484 |
| BsaJI | CCNNGG | 5 cut(s) | 1040, 1049, 1369, 1808, 1977 |
| BsaWI | WCCGGW | 4 cut(s) | 247, 1213, 1297, 1561 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 119, 133, 1370, 1375, 1456, 1790, 1826, 2056 |
| Bse118I | RCCGGY | 1 cut(s) | 986 |
| Bse1I | ACTGG | 3 cut(s) | 195, 1451, 2027 |
| Bse21I | CCTNAGG | 1 cut(s) | 411 |
| Bse8I | GATNNNNATC | 1 cut(s) | 681 |
| BseAI | TCCGGA | 1 cut(s) | 1213 |
| BseBI | CCWGG | 2 cut(s) | 1371, 2256 |
| BseCI | ATCGAT | 1 cut(s) | 1848 |
| BseDI | CCNNGG | 5 cut(s) | 1040, 1049, 1369, 1808, 1977 |
| BseGI | GGATG | 8 cut(s) | 629, 747, 842, 1039, 1126, 1171, 1294, 1465 |
| BseJI | GATNNNNATC | 1 cut(s) | 681 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 119, 133, 1370, 1375, 1456, 1790, 1826, 2056 |
| BseMII | CTCAG | 3 cut(s) | 162, 402, 1447 |
| BseNI | ACTGG | 3 cut(s) | 195, 1451, 2027 |
| BseRI | GAGGAG | 5 cut(s) | 788, 1080, 1502, 1809, 2024 |
| BseXI | GCAGC | 4 cut(s) | 723, 1370, 1729, 1969 |
| BsgI | GTGCAG | 1 cut(s) | 1736 |
| Bsh1236I | CGCG | 1 cut(s) | 1528 |
| BshFI | GGCC | 5 cut(s) | 90, 299, 452, 1054, 1976 |
| BshNI | GGYRCC | 2 cut(s) | 1546, 1853 |
| BshVI | ATCGAT | 1 cut(s) | 1848 |
| BsiHKAI | GWGCWC | 3 cut(s) | 247, 695, 1305 |
| BsiSI | CCGG | 7 cut(s) | 127, 248, 857, 987, 1214, 1298, 1562 |
| BslFI | GGGAC | 5 cut(s) | 149, 495, 1068, 1433, 2234 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 119, 133, 1370, 1375, 1456, 1790, 1826, 2056 |
| BsmAI | GTCTC | 2 cut(s) | 835, 1484 |
| BsmFI | GGGAC | 5 cut(s) | 149, 495, 1068, 1433, 2234 |
| BsmI | GAATGC | 2 cut(s) | 343, 1750 |
| BsnI | GGCC | 5 cut(s) | 90, 299, 452, 1054, 1976 |
| Bso31I | GGTCTC | 1 cut(s) | 1484 |
| Bsp1286I | GDGCHC | 3 cut(s) | 247, 695, 1305 |
| Bsp13I | TCCGGA | 1 cut(s) | 1213 |
| Bsp1407I | TGTACA | 1 cut(s) | 6 |
| Bsp143I | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| BspACI | CCGC | 3 cut(s) | 1163, 1193, 1935 |
| BspANI | GGCC | 5 cut(s) | 90, 299, 452, 1054, 1976 |
| BspCNI | CTCAG | 3 cut(s) | 163, 403, 1446 |
| BspDI | ATCGAT | 1 cut(s) | 1848 |
| BspEI | TCCGGA | 1 cut(s) | 1213 |
| BspFNI | CGCG | 1 cut(s) | 1528 |
| BspHI | TCATGA | 1 cut(s) | 45 |
| BspLI | GGNNCC | 5 cut(s) | 137, 138, 1084, 1548, 1855 |
| BspMAI | CTGCAG | 2 cut(s) | 1828, 2055 |
| BspMI | ACCTGC | 5 cut(s) | 991, 1711, 1789, 1817, 1916 |
| BspOI | GCTAGC | 2 cut(s) | 2189, 2201 |
| BspPI | GGATC | 2 cut(s) | 233, 1031 |
| BspQI | GCTCTTC | 1 cut(s) | 1321 |
| BspT107I | GGYRCC | 2 cut(s) | 1546, 1853 |
| BspTI | CTTAAG | 1 cut(s) | 1835 |
| BspTNI | GGTCTC | 1 cut(s) | 1484 |
| BsrFI | RCCGGY | 1 cut(s) | 986 |
| BsrGI | TGTACA | 1 cut(s) | 6 |
| BsrI | ACTGG | 3 cut(s) | 195, 1451, 2027 |
| BssAI | RCCGGY | 1 cut(s) | 986 |
| BssECI | CCNNGG | 5 cut(s) | 1040, 1049, 1369, 1808, 1977 |
| BssMI | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| BssSI | CACGAG | 1 cut(s) | 1629 |
| BssT1I | CCWWGG | 3 cut(s) | 1040, 1049, 1977 |
| Bst2BI | CACGAG | 1 cut(s) | 1629 |
| Bst2UI | CCWGG | 2 cut(s) | 1371, 2256 |
| Bst4CI | ACNGT | 5 cut(s) | 64, 852, 1013, 1714, 1918 |
| Bst6I | CTCTTC | 4 cut(s) | 910, 1321, 1438, 1479 |
| BstAFI | CTTAAG | 1 cut(s) | 1835 |
| BstAUI | TGTACA | 1 cut(s) | 6 |
| BstBAI | YACGTR | 1 cut(s) | 197 |
| BstDEI | CTNAG | 9 cut(s) | 171, 305, 378, 411, 696, 992, 1196, 1433, 2202 |
| BstDSI | CCRYGG | 1 cut(s) | 1808 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 117, 1824 |
| BstF5I | GGATG | 8 cut(s) | 629, 747, 842, 1039, 1126, 1171, 1294, 1465 |
| BstFNI | CGCG | 1 cut(s) | 1528 |
| BstHHI | GCGC | 1 cut(s) | 619 |
| BstKTI | GATC | 5 cut(s) | 228, 679, 1039, 1111, 1864 |
| BstMAI | GTCTC | 2 cut(s) | 835, 1484 |
| BstMBI | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 191, 571, 824, 829, 1169, 1597, 1804, 2207 |
| BstNI | CCWGG | 2 cut(s) | 1371, 2256 |
| BstNSI | RCATGY | 3 cut(s) | 806, 1391, 2249 |
| BstSCI | CCNGG | 3 cut(s) | 856, 1369, 2254 |
| BstSFI | CTRYAG | 3 cut(s) | 218, 1824, 2051 |
| BstUI | CGCG | 1 cut(s) | 1528 |
| BstV1I | GCAGC | 4 cut(s) | 723, 1370, 1729, 1969 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2078 |
| Bsu15I | ATCGAT | 1 cut(s) | 1848 |
| Bsu36I | CCTNAGG | 1 cut(s) | 411 |
| BsuI | GTATCC | 1 cut(s) | 864 |
| BsuRI | GGCC | 5 cut(s) | 90, 299, 452, 1054, 1976 |
| BsuTUI | ATCGAT | 1 cut(s) | 1848 |
| BtgI | CCRYGG | 1 cut(s) | 1808 |
| BtrI | CACGTC | 1 cut(s) | 1874 |
| BtsCI | GGATG | 8 cut(s) | 629, 747, 842, 1039, 1126, 1171, 1294, 1465 |
| BtsIMutI | CAGTG | 2 cut(s) | 981, 1946 |
| BveI | ACCTGC | 5 cut(s) | 991, 1711, 1789, 1817, 1916 |
| CciI | TCATGA | 1 cut(s) | 45 |
| CfoI | GCGC | 1 cut(s) | 619 |
| Cfr10I | RCCGGY | 1 cut(s) | 986 |
| Cfr13I | GGNCC | 2 cut(s) | 136, 1082 |
| ClaI | ATCGAT | 1 cut(s) | 1848 |
| CseI | GACGC | 1 cut(s) | 743 |
| Csp6I | GTAC | 5 cut(s) | 7, 70, 1014, 1385, 1898 |
| CviQI | GTAC | 5 cut(s) | 7, 70, 1014, 1385, 1898 |
| DdeI | CTNAG | 9 cut(s) | 171, 305, 378, 411, 696, 992, 1196, 1433, 2202 |
| DpnI | GATC | 5 cut(s) | 227, 678, 1038, 1110, 1863 |
| DpnII | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| DraI | TTTAAA | 2 cut(s) | 883, 915 |
| DraIII | CACNNNGTG | 1 cut(s) | 1631 |
| DriI | GACNNNNNGTC | 1 cut(s) | 142 |
| EaeI | YGGCCR | 2 cut(s) | 88, 450 |
| Eam1104I | CTCTTC | 4 cut(s) | 910, 1321, 1438, 1479 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 142 |
| EarI | CTCTTC | 4 cut(s) | 910, 1321, 1438, 1479 |
| Eco130I | CCWWGG | 3 cut(s) | 1040, 1049, 1977 |
| Eco147I | AGGCCT | 1 cut(s) | 1976 |
| Eco31I | GGTCTC | 1 cut(s) | 1484 |
| Eco47I | GGWCC | 2 cut(s) | 136, 1082 |
| Eco81I | CCTNAGG | 1 cut(s) | 411 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 117, 1824 |
| EcoO109I | RGGNCCY | 1 cut(s) | 136 |
| EcoRI | GAATTC | 1 cut(s) | 2014 |
| EcoRII | CCWGG | 2 cut(s) | 1369, 2254 |
| EcoT14I | CCWWGG | 3 cut(s) | 1040, 1049, 1977 |
| ErhI | CCWWGG | 3 cut(s) | 1040, 1049, 1977 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 975, 1007 |
| FaqI | GGGAC | 5 cut(s) | 149, 495, 1068, 1433, 2234 |
| FauNDI | CATATG | 1 cut(s) | 1756 |
| FbaI | TGATCA | 1 cut(s) | 1861 |
| Fnu4HI | GCNGC | 4 cut(s) | 712, 1359, 1718, 1958 |
| FokI | GGATG | 8 cut(s) | 616, 754, 849, 1046, 1133, 1178, 1281, 1472 |
| Fsp4HI | GCNGC | 4 cut(s) | 712, 1359, 1718, 1958 |
| GlaI | GCGC | 1 cut(s) | 618 |
| GluI | GCNGC | 4 cut(s) | 712, 1359, 1718, 1958 |
| GsuI | CTGGAG | 3 cut(s) | 970, 2010, 2277 |
| HaeIII | GGCC | 5 cut(s) | 90, 299, 452, 1054, 1976 |
| HapII | CCGG | 7 cut(s) | 127, 248, 857, 987, 1214, 1298, 1562 |
| HgaI | GACGC | 1 cut(s) | 743 |
| HhaI | GCGC | 1 cut(s) | 619 |
| Hin6I | GCGC | 1 cut(s) | 617 |
| HinP1I | GCGC | 1 cut(s) | 617 |
| HincII | GTYRAC | 1 cut(s) | 362 |
| HindII | GTYRAC | 1 cut(s) | 362 |
| HindIII | AAGCTT | 2 cut(s) | 422, 1170 |
| HinfI | GANTC | 9 cut(s) | 123, 505, 871, 1045, 1336, 1446, 1813, 2039, 2174 |
| HpaII | CCGG | 7 cut(s) | 127, 248, 857, 987, 1214, 1298, 1562 |
| HphI | GGTGA | 5 cut(s) | 138, 224, 248, 880, 1852 |
| Hpy166II | GTNNAC | 2 cut(s) | 362, 1254 |
| Hpy188I | TCNGA | 9 cut(s) | 510, 794, 1026, 1113, 1335, 1436, 1483, 1948, 2044 |
| Hpy188III | TCNNGA | 5 cut(s) | 46, 410, 577, 1214, 2220 |
| Hpy8I | GTNNAC | 2 cut(s) | 362, 1254 |
| Hpy99I | CGWCG | 1 cut(s) | 1878 |
| HpyAV | CCTTC | 3 cut(s) | 289, 1696, 1701 |
| HpyCH4III | ACNGT | 5 cut(s) | 64, 852, 1013, 1714, 1918 |
| HpyCH4IV | ACGT | 2 cut(s) | 196, 1873 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 191, 571, 824, 829, 1169, 1597, 1804, 2207 |
| HpyF3I | CTNAG | 9 cut(s) | 171, 305, 378, 411, 696, 992, 1196, 1433, 2202 |
| HpySE526I | ACGT | 2 cut(s) | 196, 1873 |
| HspAI | GCGC | 1 cut(s) | 617 |
| KflI | GGGWCCC | 1 cut(s) | 136 |
| Kpn2I | TCCGGA | 1 cut(s) | 1213 |
| Ksp22I | TGATCA | 1 cut(s) | 1861 |
| Kzo9I | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| LguI | GCTCTTC | 1 cut(s) | 1321 |
| LmnI | GCTCC | 7 cut(s) | 250, 584, 751, 770, 1190, 1366, 2029 |
| Lsp1109I | GCAGC | 4 cut(s) | 723, 1370, 1729, 1969 |
| LweI | GCATC | 2 cut(s) | 362, 1894 |
| MaeII | ACGT | 2 cut(s) | 196, 1873 |
| MaeIII | GTNAC | 8 cut(s) | 55, 144, 202, 978, 1475, 1621, 1777, 2276 |
| MalI | GATC | 5 cut(s) | 227, 678, 1038, 1110, 1863 |
| MboI | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| MboII | GAAGA | 7 cut(s) | 254, 897, 930, 933, 1308, 1455, 1496 |
| MhlI | GDGCHC | 3 cut(s) | 247, 695, 1305 |
| MlsI | TGGCCA | 2 cut(s) | 90, 452 |
| MluI | ACGCGT | 1 cut(s) | 1526 |
| MluNI | TGGCCA | 2 cut(s) | 90, 452 |
| MlyI | GAGTC | 5 cut(s) | 117, 880, 1345, 1455, 1822 |
| MmeI | TCCRAC | 1 cut(s) | 985 |
| Mox20I | TGGCCA | 2 cut(s) | 90, 452 |
| MroI | TCCGGA | 1 cut(s) | 1213 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1155 |
| MscI | TGGCCA | 2 cut(s) | 90, 452 |
| MseI | TTAA | 7 cut(s) | 84, 369, 882, 914, 1380, 1803, 1836 |
| MslI | CAYNNNNRTG | 4 cut(s) | 62, 1164, 1755, 1919 |
| Msp20I | TGGCCA | 2 cut(s) | 90, 452 |
| MspCI | CTTAAG | 1 cut(s) | 1835 |
| MspI | CCGG | 7 cut(s) | 127, 248, 857, 987, 1214, 1298, 1562 |
| MspR9I | CCNGG | 3 cut(s) | 858, 1371, 2256 |
| Mva1269I | GAATGC | 2 cut(s) | 343, 1750 |
| MvaI | CCWGG | 2 cut(s) | 1371, 2256 |
| MvnI | CGCG | 1 cut(s) | 1528 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 191, 571, 824, 829, 1169, 1597, 1804, 2207 |
| NciI | CCSGG | 1 cut(s) | 858 |
| NdeI | CATATG | 1 cut(s) | 1756 |
| NdeII | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| NheI | GCTAGC | 2 cut(s) | 2185, 2197 |
| NlaIV | GGNNCC | 5 cut(s) | 137, 138, 1084, 1548, 1855 |
| NmuCI | GTSAC | 4 cut(s) | 55, 144, 1621, 1777 |
| NspI | RCATGY | 3 cut(s) | 806, 1391, 2249 |
| OliI | CACNNNNGTG | 2 cut(s) | 62, 1919 |
| PaeI | GCATGC | 1 cut(s) | 806 |
| PagI | TCATGA | 1 cut(s) | 45 |
| PaqCI | CACCTGC | 1 cut(s) | 1916 |
| PceI | AGGCCT | 1 cut(s) | 1976 |
| PciI | ACATGT | 1 cut(s) | 1387 |
| PciSI | GCTCTTC | 1 cut(s) | 1321 |
| PctI | GAATGC | 2 cut(s) | 343, 1750 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1155 |
| PfeI | GAWTC | 4 cut(s) | 505, 1045, 2039, 2174 |
| PfoI | TCCNGGA | 1 cut(s) | 2254 |
| PkrI | GCNGC | 4 cut(s) | 713, 1360, 1719, 1959 |
| PleI | GAGTC | 5 cut(s) | 117, 879, 1344, 1454, 1821 |
| PpsI | GAGTC | 5 cut(s) | 117, 879, 1344, 1454, 1821 |
| Ppu21I | YACGTR | 1 cut(s) | 197 |
| PpuMI | RGGWCCY | 1 cut(s) | 136 |
| PscI | ACATGT | 1 cut(s) | 1387 |
| PshBI | ATTAAT | 1 cut(s) | 84 |
| Psp5II | RGGWCCY | 1 cut(s) | 136 |
| Psp6I | CCWGG | 2 cut(s) | 1369, 2254 |
| PspGI | CCWGG | 2 cut(s) | 1369, 2254 |
| PspN4I | GGNNCC | 5 cut(s) | 137, 138, 1084, 1548, 1855 |
| PspPI | GGNCC | 2 cut(s) | 136, 1082 |
| PspPPI | RGGWCCY | 1 cut(s) | 136 |
| PstI | CTGCAG | 2 cut(s) | 1828, 2055 |
| RsaI | GTAC | 5 cut(s) | 8, 71, 1015, 1386, 1899 |
| RsaNI | GTAC | 5 cut(s) | 7, 70, 1014, 1385, 1898 |
| RseI | CAYNNNNRTG | 4 cut(s) | 62, 1164, 1755, 1919 |
| SapI | GCTCTTC | 1 cut(s) | 1321 |
| SaqAI | TTAA | 7 cut(s) | 84, 369, 882, 914, 1380, 1803, 1836 |
| SatI | GCNGC | 4 cut(s) | 712, 1359, 1718, 1958 |
| Sau3AI | GATC | 5 cut(s) | 225, 676, 1036, 1108, 1861 |
| Sau96I | GGNCC | 2 cut(s) | 136, 1082 |
| SbfI | CCTGCAGG | 1 cut(s) | 1828 |
| SchI | GAGTC | 5 cut(s) | 117, 880, 1345, 1455, 1822 |
| ScrFI | CCNGG | 3 cut(s) | 858, 1371, 2256 |
| SdaI | CCTGCAGG | 1 cut(s) | 1828 |
| SduI | GDGCHC | 3 cut(s) | 247, 695, 1305 |
| SfaNI | GCATC | 2 cut(s) | 362, 1894 |
| SfcI | CTRYAG | 3 cut(s) | 218, 1824, 2051 |
| SinI | GGWCC | 2 cut(s) | 136, 1082 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 62, 1164, 1755, 1919 |
| SmlI | CTYRAG | 3 cut(s) | 541, 577, 1835 |
| SmoI | CTYRAG | 3 cut(s) | 541, 577, 1835 |
| SpeI | ACTAGT | 2 cut(s) | 1307, 1963 |
| SphI | GCATGC | 1 cut(s) | 806 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1828 |
| SseBI | AGGCCT | 1 cut(s) | 1976 |
| SsiI | CCGC | 3 cut(s) | 1163, 1193, 1935 |
| SspI | AATATT | 1 cut(s) | 960 |
| StuI | AGGCCT | 1 cut(s) | 1976 |
| StyD4I | CCNGG | 3 cut(s) | 856, 1369, 2254 |
| StyI | CCWWGG | 3 cut(s) | 1040, 1049, 1977 |
| TaaI | ACNGT | 5 cut(s) | 64, 852, 1013, 1714, 1918 |
| TaiI | ACGT | 2 cut(s) | 199, 1876 |
| TaqI | TCGA | 1 cut(s) | 1848 |
| TatI | WGTACW | 1 cut(s) | 6 |
| TfiI | GAWTC | 4 cut(s) | 505, 1045, 2039, 2174 |
| Tru1I | TTAA | 7 cut(s) | 84, 369, 882, 914, 1380, 1803, 1836 |
| Tru9I | TTAA | 7 cut(s) | 84, 369, 882, 914, 1380, 1803, 1836 |
| TscAI | CASTG | 2 cut(s) | 981, 1946 |
| TseFI | GTSAC | 4 cut(s) | 55, 144, 1621, 1777 |
| TseI | GCWGC | 4 cut(s) | 711, 1358, 1717, 1957 |
| Tsp45I | GTSAC | 4 cut(s) | 55, 144, 1621, 1777 |
| TspDTI | ATGAA | 7 cut(s) | 62, 725, 738, 1148, 1182, 1256, 1743 |
| TspRI | CASTG | 2 cut(s) | 981, 1946 |
| Vha464I | CTTAAG | 1 cut(s) | 1835 |
| VpaK11BI | GGWCC | 2 cut(s) | 136, 1082 |
| VspI | ATTAAT | 1 cut(s) | 84 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 117, 1824 |
| XapI | RAATTY | 5 cut(s) | 231, 732, 1057, 1153, 2014 |
| XceI | RCATGY | 3 cut(s) | 806, 1391, 2249 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1155 |