zinc-binding in reverse transcriptase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 787, 829 |
| AccI | GTMKAC | 1 cut(s) | 175 |
| AciI | CCGC | 3 cut(s) | 74, 466, 792 |
| AclWI | GGATC | 1 cut(s) | 528 |
| AcoI | YGGCCR | 1 cut(s) | 42 |
| AcsI | RAATTY | 1 cut(s) | 355 |
| AcuI | CTGAAG | 3 cut(s) | 647, 654, 854 |
| AfaI | GTAC | 4 cut(s) | 110, 281, 321, 373 |
| AflIII | ACRYGT | 1 cut(s) | 964 |
| AgeI | ACCGGT | 1 cut(s) | 190 |
| AgsI | TTSAA | 8 cut(s) | 10, 100, 182, 199, 314, 382, 644, 934 |
| AjnI | CCWGG | 1 cut(s) | 594 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 259, 291, 500, 532 |
| AluBI | AGCT | 6 cut(s) | 137, 445, 456, 694, 954, 973 |
| AluI | AGCT | 6 cut(s) | 137, 445, 456, 694, 954, 973 |
| AlwI | GGATC | 1 cut(s) | 528 |
| AoxI | GGCC | 4 cut(s) | 42, 293, 524, 910 |
| ApeKI | GCWGC | 1 cut(s) | 499 |
| ApoI | RAATTY | 1 cut(s) | 355 |
| AsiGI | ACCGGT | 1 cut(s) | 190 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 512 |
| AspS9I | GGNCC | 1 cut(s) | 910 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 329 |
| BalI | TGGCCA | 1 cut(s) | 44 |
| BbvI | GCAGC | 1 cut(s) | 486 |
| BccI | CCATC | 5 cut(s) | 48, 163, 221, 842, 989 |
| BciT130I | CCWGG | 1 cut(s) | 596 |
| BclI | TGATCA | 2 cut(s) | 63, 334 |
| BfaI | CTAG | 2 cut(s) | 143, 771 |
| BfuAI | ACCTGC | 2 cut(s) | 787, 829 |
| BglII | AGATCT | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 500 |
| BlsI | GCNGC | 1 cut(s) | 501 |
| BmcAI | AGTACT | 1 cut(s) | 373 |
| Bme1390I | CCNGG | 1 cut(s) | 596 |
| BmgT120I | GGNCC | 1 cut(s) | 910 |
| BmiI | GGNNCC | 1 cut(s) | 153 |
| BmrFI | CCNGG | 1 cut(s) | 596 |
| BmrI | ACTGGG | 1 cut(s) | 504 |
| BmsI | GCATC | 1 cut(s) | 244 |
| BmuI | ACTGGG | 1 cut(s) | 504 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 400, 432, 879, 911 |
| BsaAI | YACGTR | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 1 cut(s) | 527 |
| BsaWI | WCCGGW | 1 cut(s) | 190 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 208, 238 |
| Bse118I | RCCGGY | 1 cut(s) | 190 |
| Bse1I | ACTGG | 2 cut(s) | 499, 938 |
| Bse3DI | GCAATG | 2 cut(s) | 42, 801 |
| BseBI | CCWGG | 1 cut(s) | 596 |
| BseDI | CCNNGG | 1 cut(s) | 527 |
| BseGI | GGATG | 3 cut(s) | 59, 66, 609 |
| BseMI | GCAATG | 2 cut(s) | 42, 801 |
| BseMII | CTCAG | 3 cut(s) | 104, 288, 398 |
| BseNI | ACTGG | 2 cut(s) | 499, 938 |
| BseRI | GAGGAG | 1 cut(s) | 184 |
| BseXI | GCAGC | 1 cut(s) | 486 |
| BshFI | GGCC | 4 cut(s) | 44, 295, 526, 912 |
| BshTI | ACCGGT | 1 cut(s) | 190 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| BslFI | GGGAC | 1 cut(s) | 770 |
| BsmFI | GGGAC | 1 cut(s) | 770 |
| BsmI | GAATGC | 1 cut(s) | 411 |
| BsnI | GGCC | 4 cut(s) | 44, 295, 526, 912 |
| Bsp143I | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| BspACI | CCGC | 3 cut(s) | 74, 466, 792 |
| BspANI | GGCC | 4 cut(s) | 44, 295, 526, 912 |
| BspCNI | CTCAG | 3 cut(s) | 103, 289, 399 |
| BspLI | GGNNCC | 1 cut(s) | 153 |
| BspMI | ACCTGC | 2 cut(s) | 787, 829 |
| BspPI | GGATC | 1 cut(s) | 528 |
| BsrDI | GCAATG | 2 cut(s) | 42, 801 |
| BsrFI | RCCGGY | 1 cut(s) | 190 |
| BsrI | ACTGG | 2 cut(s) | 499, 938 |
| BssAI | RCCGGY | 1 cut(s) | 190 |
| BssECI | CCNNGG | 1 cut(s) | 527 |
| BssMI | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| BssNAI | GTATAC | 1 cut(s) | 176 |
| BssT1I | CCWWGG | 1 cut(s) | 527 |
| Bst1107I | GTATAC | 1 cut(s) | 176 |
| Bst2UI | CCWGG | 1 cut(s) | 596 |
| Bst4CI | ACNGT | 1 cut(s) | 480 |
| Bst6I | CTCTTC | 1 cut(s) | 624 |
| BstBAI | YACGTR | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 1 cut(s) | 792 |
| BstDEI | CTNAG | 3 cut(s) | 90, 297, 407 |
| BstEII | GGTNACC | 1 cut(s) | 547 |
| BstF5I | GGATG | 3 cut(s) | 59, 66, 609 |
| BstKTI | GATC | 5 cut(s) | 66, 96, 328, 337, 523 |
| BstMBI | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 442, 496, 796 |
| BstNI | CCWGG | 1 cut(s) | 596 |
| BstNSI | RCATGY | 1 cut(s) | 968 |
| BstPI | GGTNACC | 1 cut(s) | 547 |
| BstSCI | CCNGG | 1 cut(s) | 594 |
| BstV1I | GCAGC | 1 cut(s) | 486 |
| BstX2I | RGATCY | 1 cut(s) | 93 |
| BstYI | RGATCY | 1 cut(s) | 93 |
| BstZ17I | GTATAC | 1 cut(s) | 176 |
| BsuRI | GGCC | 4 cut(s) | 44, 295, 526, 912 |
| BtsCI | GGATG | 3 cut(s) | 59, 66, 609 |
| BtsIMutI | CAGTG | 1 cut(s) | 476 |
| BveI | ACCTGC | 2 cut(s) | 787, 829 |
| Cac8I | GCNNGC | 1 cut(s) | 792 |
| Cfr10I | RCCGGY | 1 cut(s) | 190 |
| Cfr13I | GGNCC | 1 cut(s) | 910 |
| CseI | GACGC | 1 cut(s) | 351 |
| Csp6I | GTAC | 4 cut(s) | 109, 280, 320, 372 |
| CspAI | ACCGGT | 1 cut(s) | 190 |
| CviAII | CATG | 3 cut(s) | 258, 351, 965 |
| CviQI | GTAC | 4 cut(s) | 109, 280, 320, 372 |
| DdeI | CTNAG | 3 cut(s) | 90, 297, 407 |
| DpnI | GATC | 5 cut(s) | 65, 95, 327, 336, 522 |
| DpnII | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| DraI | TTTAAA | 1 cut(s) | 558 |
| EaeI | YGGCCR | 1 cut(s) | 42 |
| Eam1104I | CTCTTC | 1 cut(s) | 624 |
| EarI | CTCTTC | 1 cut(s) | 624 |
| Eco130I | CCWWGG | 1 cut(s) | 527 |
| Eco147I | AGGCCT | 1 cut(s) | 295 |
| Eco32I | GATATC | 1 cut(s) | 727 |
| Eco57I | CTGAAG | 3 cut(s) | 647, 654, 854 |
| Eco91I | GGTNACC | 1 cut(s) | 547 |
| EcoO65I | GGTNACC | 1 cut(s) | 547 |
| EcoRII | CCWGG | 1 cut(s) | 594 |
| EcoRV | GATATC | 1 cut(s) | 727 |
| EcoT14I | CCWWGG | 1 cut(s) | 527 |
| EcoT22I | ATGCAT | 1 cut(s) | 259 |
| ErhI | CCWWGG | 1 cut(s) | 527 |
| FaeI | CATG | 3 cut(s) | 261, 354, 968 |
| FaqI | GGGAC | 1 cut(s) | 770 |
| FatI | CATG | 3 cut(s) | 257, 350, 964 |
| FauI | CCCGC | 2 cut(s) | 459, 799 |
| FbaI | TGATCA | 2 cut(s) | 63, 334 |
| FblI | GTMKAC | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 1 cut(s) | 500 |
| FokI | GGATG | 3 cut(s) | 66, 73, 616 |
| Fsp4HI | GCNGC | 1 cut(s) | 500 |
| FspBI | CTAG | 2 cut(s) | 143, 771 |
| GluI | GCNGC | 1 cut(s) | 500 |
| HaeIII | GGCC | 4 cut(s) | 44, 295, 526, 912 |
| HapII | CCGG | 1 cut(s) | 191 |
| HgaI | GACGC | 1 cut(s) | 351 |
| Hin1II | CATG | 3 cut(s) | 261, 354, 968 |
| HincII | GTYRAC | 1 cut(s) | 943 |
| HindII | GTYRAC | 1 cut(s) | 943 |
| HinfI | GANTC | 2 cut(s) | 13, 262 |
| HpaI | GTTAAC | 1 cut(s) | 943 |
| HpaII | CCGG | 1 cut(s) | 191 |
| HphI | GGTGA | 2 cut(s) | 236, 329 |
| Hpy166II | GTNNAC | 4 cut(s) | 176, 241, 776, 943 |
| Hpy188I | TCNGA | 6 cut(s) | 93, 408, 627, 765, 834, 899 |
| Hpy188III | TCNNGA | 2 cut(s) | 10, 814 |
| Hpy8I | GTNNAC | 4 cut(s) | 176, 241, 776, 943 |
| HpyAV | CCTTC | 5 cut(s) | 176, 285, 566, 622, 760 |
| HpyCH4III | ACNGT | 1 cut(s) | 480 |
| HpyCH4IV | ACGT | 2 cut(s) | 308, 322 |
| HpyCH4V | TGCA | 7 cut(s) | 257, 436, 490, 502, 689, 712, 799 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 442, 496, 796 |
| HpyF3I | CTNAG | 3 cut(s) | 90, 297, 407 |
| HpySE526I | ACGT | 2 cut(s) | 308, 322 |
| Hsp92II | CATG | 3 cut(s) | 261, 354, 968 |
| Ksp22I | TGATCA | 2 cut(s) | 63, 334 |
| KspAI | GTTAAC | 1 cut(s) | 943 |
| Kzo9I | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| LmnI | GCTCC | 4 cut(s) | 157, 453, 610, 851 |
| Lsp1109I | GCAGC | 1 cut(s) | 486 |
| LweI | GCATC | 1 cut(s) | 244 |
| MaeI | CTAG | 2 cut(s) | 143, 771 |
| MaeII | ACGT | 2 cut(s) | 308, 322 |
| MaeIII | GTNAC | 3 cut(s) | 391, 425, 547 |
| MalI | GATC | 5 cut(s) | 65, 95, 327, 336, 522 |
| MboI | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| MboII | GAAGA | 3 cut(s) | 88, 533, 611 |
| MflI | RGATCY | 1 cut(s) | 93 |
| MlsI | TGGCCA | 1 cut(s) | 44 |
| MluCI | AATT | 4 cut(s) | 28, 219, 268, 355 |
| MluNI | TGGCCA | 1 cut(s) | 44 |
| MmeI | TCCRAC | 2 cut(s) | 588, 865 |
| MnlI | CCTC | 7 cut(s) | 51, 142, 162, 426, 575, 872, 881 |
| Mox20I | TGGCCA | 1 cut(s) | 44 |
| Mph1103I | ATGCAT | 1 cut(s) | 259 |
| MroXI | GAANNNNTTC | 1 cut(s) | 512 |
| MscI | TGGCCA | 1 cut(s) | 44 |
| MseI | TTAA | 3 cut(s) | 557, 839, 942 |
| Msp20I | TGGCCA | 1 cut(s) | 44 |
| MspI | CCGG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 1 cut(s) | 596 |
| Mva1269I | GAATGC | 1 cut(s) | 411 |
| MvaI | CCWGG | 1 cut(s) | 596 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 442, 496, 796 |
| NdeII | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| NlaIII | CATG | 3 cut(s) | 261, 354, 968 |
| NlaIV | GGNNCC | 1 cut(s) | 153 |
| NsiI | ATGCAT | 1 cut(s) | 259 |
| NspI | RCATGY | 1 cut(s) | 968 |
| PceI | AGGCCT | 1 cut(s) | 295 |
| PciI | ACATGT | 1 cut(s) | 964 |
| PctI | GAATGC | 1 cut(s) | 411 |
| PdmI | GAANNNNTTC | 1 cut(s) | 512 |
| PfeI | GAWTC | 2 cut(s) | 13, 262 |
| PfoI | TCCNGGA | 1 cut(s) | 594 |
| PinAI | ACCGGT | 1 cut(s) | 190 |
| PkrI | GCNGC | 1 cut(s) | 501 |
| Ppu21I | YACGTR | 1 cut(s) | 323 |
| PscI | ACATGT | 1 cut(s) | 964 |
| Psp6I | CCWGG | 1 cut(s) | 594 |
| PspEI | GGTNACC | 1 cut(s) | 547 |
| PspGI | CCWGG | 1 cut(s) | 594 |
| PspN4I | GGNNCC | 1 cut(s) | 153 |
| PspPI | GGNCC | 1 cut(s) | 910 |
| PsuI | RGATCY | 1 cut(s) | 93 |
| RsaI | GTAC | 4 cut(s) | 110, 281, 321, 373 |
| RsaNI | GTAC | 4 cut(s) | 109, 280, 320, 372 |
| SaqAI | TTAA | 3 cut(s) | 557, 839, 942 |
| SatI | GCNGC | 1 cut(s) | 500 |
| Sau3AI | GATC | 5 cut(s) | 63, 93, 325, 334, 520 |
| Sau96I | GGNCC | 1 cut(s) | 910 |
| ScaI | AGTACT | 1 cut(s) | 373 |
| ScrFI | CCNGG | 1 cut(s) | 596 |
| SfaNI | GCATC | 1 cut(s) | 244 |
| Sse9I | AATT | 4 cut(s) | 28, 219, 268, 355 |
| SseBI | AGGCCT | 1 cut(s) | 295 |
| SsiI | CCGC | 3 cut(s) | 74, 466, 792 |
| SspMI | CTAG | 2 cut(s) | 143, 771 |
| StuI | AGGCCT | 1 cut(s) | 295 |
| StyD4I | CCNGG | 1 cut(s) | 594 |
| StyI | CCWWGG | 1 cut(s) | 527 |
| TaaI | ACNGT | 1 cut(s) | 480 |
| TaiI | ACGT | 2 cut(s) | 311, 325 |
| TaqI | TCGA | 2 cut(s) | 682, 846 |
| TasI | AATT | 4 cut(s) | 28, 219, 268, 355 |
| TatI | WGTACW | 1 cut(s) | 371 |
| TfiI | GAWTC | 2 cut(s) | 13, 262 |
| Tru1I | TTAA | 3 cut(s) | 557, 839, 942 |
| Tru9I | TTAA | 3 cut(s) | 557, 839, 942 |
| TscAI | CASTG | 1 cut(s) | 483 |
| TseI | GCWGC | 1 cut(s) | 499 |
| TspDTI | ATGAA | 2 cut(s) | 474, 611 |
| TspRI | CASTG | 1 cut(s) | 483 |
| XapI | RAATTY | 1 cut(s) | 355 |
| XceI | RCATGY | 1 cut(s) | 968 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 162 |
| XmiI | GTMKAC | 1 cut(s) | 175 |
| XmnI | GAANNNNTTC | 1 cut(s) | 512 |
| XspI | CTAG | 2 cut(s) | 143, 771 |
| ZrmI | AGTACT | 1 cut(s) | 373 |
| Zsp2I | ATGCAT | 1 cut(s) | 259 |