zinc-binding in reverse transcriptase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 993 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 819 |
| AccI | GTMKAC | 1 cut(s) | 533 |
| AccII | CGCG | 1 cut(s) | 849 |
| AciI | CCGC | 3 cut(s) | 245, 512, 521 |
| AcoI | YGGCCR | 1 cut(s) | 379 |
| AcsI | RAATTY | 2 cut(s) | 707, 1156 |
| AcuI | CTGAAG | 1 cut(s) | 1146 |
| AfaI | GTAC | 4 cut(s) | 833, 970, 1146, 1222 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 474, 527, 819, 867, 965 |
| AgsI | TTSAA | 1 cut(s) | 1102 |
| AhlI | ACTAGT | 1 cut(s) | 49 |
| AjiI | CACGTC | 1 cut(s) | 210 |
| AjnI | CCWGG | 3 cut(s) | 23, 57, 793 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 575, 607 |
| Alw21I | GWGCWC | 2 cut(s) | 1062, 1192 |
| Alw26I | GTCTC | 2 cut(s) | 136, 560 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 105, 265 |
| Ama87I | CYCGRG | 2 cut(s) | 363, 612 |
| AoxI | GGCC | 5 cut(s) | 348, 379, 418, 444, 997 |
| ApeKI | GCWGC | 1 cut(s) | 1010 |
| ApoI | RAATTY | 2 cut(s) | 707, 1156 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1160, 1192 |
| AspLEI | GCGC | 1 cut(s) | 994 |
| AspS9I | GGNCC | 5 cut(s) | 109, 409, 419, 791, 997 |
| AsuHPI | GGTGA | 1 cut(s) | 352 |
| AsuII | TTCGAA | 1 cut(s) | 240 |
| AvaI | CYCGRG | 2 cut(s) | 363, 612 |
| AvaII | GGWCC | 3 cut(s) | 109, 409, 791 |
| BalI | TGGCCA | 1 cut(s) | 381 |
| BanII | GRGCYC | 2 cut(s) | 1062, 1192 |
| BauI | CACGAG | 1 cut(s) | 507 |
| Bbv12I | GWGCWC | 2 cut(s) | 1062, 1192 |
| BbvI | GCAGC | 1 cut(s) | 997 |
| BccI | CCATC | 5 cut(s) | 133, 144, 476, 860, 929 |
| BciT130I | CCWGG | 3 cut(s) | 25, 59, 795 |
| BciVI | GTATCC | 2 cut(s) | 114, 154 |
| BclI | TGATCA | 1 cut(s) | 189 |
| BcoDI | GTCTC | 2 cut(s) | 136, 560 |
| BcuI | ACTAGT | 1 cut(s) | 49 |
| BfaI | CTAG | 4 cut(s) | 50, 837, 1064, 1082 |
| BfmI | CTRYAG | 1 cut(s) | 357 |
| BfuI | GTATCC | 2 cut(s) | 114, 154 |
| BglII | AGATCT | 1 cut(s) | 541 |
| BisI | GCNGC | 2 cut(s) | 513, 1011 |
| BlsI | GCNGC | 2 cut(s) | 514, 1012 |
| BmcAI | AGTACT | 1 cut(s) | 833 |
| Bme1390I | CCNGG | 3 cut(s) | 25, 59, 795 |
| Bme18I | GGWCC | 3 cut(s) | 109, 409, 791 |
| BmeT110I | CYCGRG | 2 cut(s) | 363, 612 |
| BmgBI | CACGTC | 1 cut(s) | 210 |
| BmgT120I | GGNCC | 5 cut(s) | 109, 409, 419, 791, 997 |
| BmiI | GGNNCC | 3 cut(s) | 110, 410, 411 |
| BmrFI | CCNGG | 3 cut(s) | 25, 59, 795 |
| BmrI | ACTGGG | 1 cut(s) | 414 |
| BmsI | GCATC | 1 cut(s) | 42 |
| BmuI | ACTGGG | 1 cut(s) | 414 |
| BplI | GAGNNNNNCTC | 5 cut(s) | 31, 474, 506, 818, 850 |
| BpmI | CTGGAG | 4 cut(s) | 41, 46, 448, 558 |
| Bpu14I | TTCGAA | 1 cut(s) | 240 |
| BsaJI | CCNNGG | 2 cut(s) | 813, 861 |
| BsaWI | WCCGGW | 1 cut(s) | 885 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 39, 67, 69, 97 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 474, 527, 819, 867, 965 |
| Bse1I | ACTGG | 8 cut(s) | 122, 409, 541, 677, 729, 793, 804, 976 |
| BseBI | CCWGG | 3 cut(s) | 25, 59, 795 |
| BseDI | CCNNGG | 2 cut(s) | 813, 861 |
| BseGI | GGATG | 3 cut(s) | 96, 220, 871 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 474, 527, 819, 867, 965 |
| BseMII | CTCAG | 1 cut(s) | 555 |
| BseNI | ACTGG | 8 cut(s) | 122, 409, 541, 677, 729, 793, 804, 976 |
| BseRI | GAGGAG | 2 cut(s) | 43, 842 |
| BseXI | GCAGC | 1 cut(s) | 997 |
| Bsh1236I | CGCG | 1 cut(s) | 849 |
| BshFI | GGCC | 5 cut(s) | 350, 381, 420, 446, 999 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1062, 1192 |
| BsiHKCI | CYCGRG | 2 cut(s) | 363, 612 |
| BsiSI | CCGG | 1 cut(s) | 886 |
| BslFI | GGGAC | 2 cut(s) | 122, 422 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 474, 527, 819, 867, 965 |
| BsmAI | GTCTC | 2 cut(s) | 136, 560 |
| BsmBI | CGTCTC | 1 cut(s) | 560 |
| BsmFI | GGGAC | 2 cut(s) | 122, 422 |
| BsmI | GAATGC | 1 cut(s) | 994 |
| BsnI | GGCC | 5 cut(s) | 350, 381, 420, 446, 999 |
| BsoBI | CYCGRG | 2 cut(s) | 363, 612 |
| Bsp119I | TTCGAA | 1 cut(s) | 240 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1062, 1192 |
| Bsp143I | GATC | 4 cut(s) | 184, 189, 541, 618 |
| Bsp19I | CCATGG | 1 cut(s) | 813 |
| BspACI | CCGC | 3 cut(s) | 245, 512, 521 |
| BspANI | GGCC | 5 cut(s) | 350, 381, 420, 446, 999 |
| BspCNI | CTCAG | 1 cut(s) | 556 |
| BspFNI | CGCG | 1 cut(s) | 849 |
| BspLI | GGNNCC | 3 cut(s) | 110, 410, 411 |
| BspT104I | TTCGAA | 1 cut(s) | 240 |
| BsrI | ACTGG | 8 cut(s) | 122, 409, 541, 677, 729, 793, 804, 976 |
| BssECI | CCNNGG | 2 cut(s) | 813, 861 |
| BssMI | GATC | 4 cut(s) | 184, 189, 541, 618 |
| BssNAI | GTATAC | 1 cut(s) | 534 |
| BssSI | CACGAG | 1 cut(s) | 507 |
| BssT1I | CCWWGG | 1 cut(s) | 813 |
| Bst1107I | GTATAC | 1 cut(s) | 534 |
| Bst2BI | CACGAG | 1 cut(s) | 507 |
| Bst2UI | CCWGG | 3 cut(s) | 25, 59, 795 |
| Bst4CI | ACNGT | 4 cut(s) | 166, 571, 894, 1144 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 230 |
| BstBI | TTCGAA | 1 cut(s) | 240 |
| BstC8I | GCNNGC | 2 cut(s) | 444, 900 |
| BstDEI | CTNAG | 4 cut(s) | 145, 278, 564, 1110 |
| BstDSI | CCRYGG | 2 cut(s) | 813, 861 |
| BstEII | GGTNACC | 2 cut(s) | 802, 1027 |
| BstF5I | GGATG | 3 cut(s) | 96, 220, 871 |
| BstFNI | CGCG | 1 cut(s) | 849 |
| BstHHI | GCGC | 1 cut(s) | 994 |
| BstKTI | GATC | 4 cut(s) | 187, 192, 544, 621 |
| BstMAI | GTCTC | 2 cut(s) | 136, 560 |
| BstMBI | GATC | 4 cut(s) | 184, 189, 541, 618 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 230, 1057 |
| BstNI | CCWGG | 3 cut(s) | 25, 59, 795 |
| BstNSI | RCATGY | 1 cut(s) | 251 |
| BstPI | GGTNACC | 2 cut(s) | 802, 1027 |
| BstSCI | CCNGG | 3 cut(s) | 23, 57, 793 |
| BstSFI | CTRYAG | 1 cut(s) | 357 |
| BstUI | CGCG | 1 cut(s) | 849 |
| BstV1I | GCAGC | 1 cut(s) | 997 |
| BstX2I | RGATCY | 1 cut(s) | 541 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 814 |
| BstYI | RGATCY | 1 cut(s) | 541 |
| BstZ17I | GTATAC | 1 cut(s) | 534 |
| BsuI | GTATCC | 2 cut(s) | 114, 154 |
| BsuRI | GGCC | 5 cut(s) | 350, 381, 420, 446, 999 |
| BtgI | CCRYGG | 2 cut(s) | 813, 861 |
| BtgZI | GCGATG | 1 cut(s) | 830 |
| BtrI | CACGTC | 1 cut(s) | 210 |
| BtsCI | GGATG | 3 cut(s) | 96, 220, 871 |
| BtsI | GCAGTG | 2 cut(s) | 807, 1122 |
| BtsIMutI | CAGTG | 4 cut(s) | 402, 807, 899, 1122 |
| Cac8I | GCNNGC | 2 cut(s) | 444, 900 |
| CaiI | CAGNNNCTG | 2 cut(s) | 105, 265 |
| CfoI | GCGC | 1 cut(s) | 994 |
| Cfr13I | GGNCC | 5 cut(s) | 109, 409, 419, 791, 997 |
| Csp6I | GTAC | 4 cut(s) | 832, 969, 1145, 1221 |
| CviAII | CATG | 6 cut(s) | 37, 140, 230, 248, 663, 814 |
| CviQI | GTAC | 4 cut(s) | 832, 969, 1145, 1221 |
| DdeI | CTNAG | 4 cut(s) | 145, 278, 564, 1110 |
| DpnI | GATC | 4 cut(s) | 186, 191, 543, 620 |
| DpnII | GATC | 4 cut(s) | 184, 189, 541, 618 |
| EaeI | YGGCCR | 1 cut(s) | 379 |
| Ecl136II | GAGCTC | 2 cut(s) | 1060, 1190 |
| Eco130I | CCWWGG | 1 cut(s) | 813 |
| Eco24I | GRGCYC | 2 cut(s) | 1062, 1192 |
| Eco32I | GATATC | 1 cut(s) | 776 |
| Eco47I | GGWCC | 3 cut(s) | 109, 409, 791 |
| Eco53kI | GAGCTC | 2 cut(s) | 1060, 1190 |
| Eco57I | CTGAAG | 1 cut(s) | 1146 |
| Eco88I | CYCGRG | 2 cut(s) | 363, 612 |
| Eco91I | GGTNACC | 2 cut(s) | 802, 1027 |
| EcoICRI | GAGCTC | 2 cut(s) | 1060, 1190 |
| EcoO109I | RGGNCCY | 2 cut(s) | 409, 997 |
| EcoO65I | GGTNACC | 2 cut(s) | 802, 1027 |
| EcoRII | CCWGG | 3 cut(s) | 23, 57, 793 |
| EcoRV | GATATC | 1 cut(s) | 776 |
| EcoT14I | CCWWGG | 1 cut(s) | 813 |
| EcoT38I | GRGCYC | 2 cut(s) | 1062, 1192 |
| ErhI | CCWWGG | 1 cut(s) | 813 |
| Esp3I | CGTCTC | 1 cut(s) | 560 |
| FaeI | CATG | 6 cut(s) | 40, 143, 233, 251, 666, 817 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1016, 1048 |
| FaqI | GGGAC | 2 cut(s) | 122, 422 |
| FatI | CATG | 6 cut(s) | 36, 139, 229, 247, 662, 813 |
| FbaI | TGATCA | 1 cut(s) | 189 |
| FblI | GTMKAC | 1 cut(s) | 533 |
| Fnu4HI | GCNGC | 2 cut(s) | 513, 1011 |
| FokI | GGATG | 3 cut(s) | 103, 227, 878 |
| FriOI | GRGCYC | 2 cut(s) | 1062, 1192 |
| Fsp4HI | GCNGC | 2 cut(s) | 513, 1011 |
| FspBI | CTAG | 4 cut(s) | 50, 837, 1064, 1082 |
| FspI | TGCGCA | 1 cut(s) | 993 |
| GlaI | GCGC | 1 cut(s) | 993 |
| GluI | GCNGC | 2 cut(s) | 513, 1011 |
| GsuI | CTGGAG | 4 cut(s) | 41, 46, 448, 558 |
| HaeIII | GGCC | 5 cut(s) | 350, 381, 420, 446, 999 |
| HapII | CCGG | 1 cut(s) | 886 |
| HhaI | GCGC | 1 cut(s) | 994 |
| Hin1II | CATG | 6 cut(s) | 40, 143, 233, 251, 666, 817 |
| Hin6I | GCGC | 1 cut(s) | 992 |
| HinP1I | GCGC | 1 cut(s) | 992 |
| HincII | GTYRAC | 2 cut(s) | 875, 883 |
| HindII | GTYRAC | 2 cut(s) | 875, 883 |
| HinfI | GANTC | 1 cut(s) | 687 |
| HpaII | CCGG | 1 cut(s) | 886 |
| HphI | GGTGA | 1 cut(s) | 352 |
| Hpy166II | GTNNAC | 4 cut(s) | 534, 875, 883, 1043 |
| Hpy188I | TCNGA | 7 cut(s) | 160, 189, 565, 706, 987, 1194, 1201 |
| Hpy188III | TCNNGA | 6 cut(s) | 365, 427, 614, 680, 745, 1123 |
| Hpy8I | GTNNAC | 4 cut(s) | 534, 875, 883, 1043 |
| HpyAV | CCTTC | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 4 cut(s) | 166, 571, 894, 1144 |
| HpyCH4IV | ACGT | 1 cut(s) | 209 |
| HpyCH4V | TGCA | 2 cut(s) | 224, 1051 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 230, 1057 |
| HpyF3I | CTNAG | 4 cut(s) | 145, 278, 564, 1110 |
| HpySE526I | ACGT | 1 cut(s) | 209 |
| Hsp92II | CATG | 6 cut(s) | 40, 143, 233, 251, 666, 817 |
| HspAI | GCGC | 1 cut(s) | 992 |
| KflI | GGGWCCC | 1 cut(s) | 409 |
| Ksp22I | TGATCA | 1 cut(s) | 189 |
| Kzo9I | GATC | 4 cut(s) | 184, 189, 541, 618 |
| LmnI | GCTCC | 4 cut(s) | 30, 938, 1065, 1187 |
| Lsp1109I | GCAGC | 1 cut(s) | 997 |
| LweI | GCATC | 1 cut(s) | 42 |
| MaeI | CTAG | 4 cut(s) | 50, 837, 1064, 1082 |
| MaeII | ACGT | 1 cut(s) | 209 |
| MaeIII | GTNAC | 4 cut(s) | 688, 802, 850, 1027 |
| MalI | GATC | 4 cut(s) | 186, 191, 543, 620 |
| MboI | GATC | 4 cut(s) | 184, 189, 541, 618 |
| MboII | GAAGA | 5 cut(s) | 390, 536, 760, 1084, 1152 |
| MflI | RGATCY | 1 cut(s) | 541 |
| MhlI | GDGCHC | 2 cut(s) | 1062, 1192 |
| MlsI | TGGCCA | 1 cut(s) | 381 |
| MluCI | AATT | 3 cut(s) | 707, 1085, 1156 |
| MluNI | TGGCCA | 1 cut(s) | 381 |
| MlyI | GAGTC | 1 cut(s) | 696 |
| MnlI | CCTC | 8 cut(s) | 21, 25, 69, 320, 500, 820, 1010, 1195 |
| Mox20I | TGGCCA | 1 cut(s) | 381 |
| MscI | TGGCCA | 1 cut(s) | 381 |
| MseI | TTAA | 4 cut(s) | 317, 1091, 1137, 1206 |
| MslI | CAYNNNNRTG | 2 cut(s) | 695, 812 |
| Msp20I | TGGCCA | 1 cut(s) | 381 |
| MspI | CCGG | 1 cut(s) | 886 |
| MspR9I | CCNGG | 3 cut(s) | 25, 59, 795 |
| Mva1269I | GAATGC | 1 cut(s) | 994 |
| MvaI | CCWGG | 3 cut(s) | 25, 59, 795 |
| MvnI | CGCG | 1 cut(s) | 849 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 230, 1057 |
| NcoI | CCATGG | 1 cut(s) | 813 |
| NdeII | GATC | 4 cut(s) | 184, 189, 541, 618 |
| NlaIII | CATG | 6 cut(s) | 40, 143, 233, 251, 666, 817 |
| NlaIV | GGNNCC | 3 cut(s) | 110, 410, 411 |
| NmuCI | GTSAC | 1 cut(s) | 688 |
| NsbI | TGCGCA | 1 cut(s) | 993 |
| NspI | RCATGY | 1 cut(s) | 251 |
| NspV | TTCGAA | 1 cut(s) | 240 |
| PctI | GAATGC | 1 cut(s) | 994 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 819 |
| PfoI | TCCNGGA | 1 cut(s) | 23 |
| PkrI | GCNGC | 2 cut(s) | 514, 1012 |
| PleI | GAGTC | 1 cut(s) | 695 |
| PpsI | GAGTC | 1 cut(s) | 695 |
| PpuMI | RGGWCCY | 1 cut(s) | 409 |
| Psp124BI | GAGCTC | 2 cut(s) | 1062, 1192 |
| Psp5II | RGGWCCY | 1 cut(s) | 409 |
| Psp6I | CCWGG | 3 cut(s) | 23, 57, 793 |
| PspEI | GGTNACC | 2 cut(s) | 802, 1027 |
| PspGI | CCWGG | 3 cut(s) | 23, 57, 793 |
| PspN4I | GGNNCC | 3 cut(s) | 110, 410, 411 |
| PspPI | GGNCC | 5 cut(s) | 109, 409, 419, 791, 997 |
| PspPPI | RGGWCCY | 1 cut(s) | 409 |
| PstNI | CAGNNNCTG | 2 cut(s) | 105, 265 |
| PsuI | RGATCY | 1 cut(s) | 541 |
| RsaI | GTAC | 4 cut(s) | 833, 970, 1146, 1222 |
| RsaNI | GTAC | 4 cut(s) | 832, 969, 1145, 1221 |
| RseI | CAYNNNNRTG | 2 cut(s) | 695, 812 |
| SacI | GAGCTC | 2 cut(s) | 1062, 1192 |
| SaqAI | TTAA | 4 cut(s) | 317, 1091, 1137, 1206 |
| SatI | GCNGC | 2 cut(s) | 513, 1011 |
| Sau3AI | GATC | 4 cut(s) | 184, 189, 541, 618 |
| Sau96I | GGNCC | 5 cut(s) | 109, 409, 419, 791, 997 |
| ScaI | AGTACT | 1 cut(s) | 833 |
| SchI | GAGTC | 1 cut(s) | 696 |
| ScrFI | CCNGG | 3 cut(s) | 25, 59, 795 |
| SduI | GDGCHC | 2 cut(s) | 1062, 1192 |
| SfaNI | GCATC | 1 cut(s) | 42 |
| SfcI | CTRYAG | 1 cut(s) | 357 |
| SfuI | TTCGAA | 1 cut(s) | 240 |
| SinI | GGWCC | 3 cut(s) | 109, 409, 791 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 695, 812 |
| SpeI | ACTAGT | 1 cut(s) | 49 |
| Sse9I | AATT | 3 cut(s) | 707, 1085, 1156 |
| SsiI | CCGC | 3 cut(s) | 245, 512, 521 |
| SspMI | CTAG | 4 cut(s) | 50, 837, 1064, 1082 |
| SstI | GAGCTC | 2 cut(s) | 1062, 1192 |
| StyD4I | CCNGG | 3 cut(s) | 23, 57, 793 |
| StyI | CCWWGG | 1 cut(s) | 813 |
| TaaI | ACNGT | 4 cut(s) | 166, 571, 894, 1144 |
| TaiI | ACGT | 1 cut(s) | 212 |
| TaqI | TCGA | 4 cut(s) | 46, 240, 547, 1122 |
| TaqII | GACCGA | 1 cut(s) | 85 |
| TasI | AATT | 3 cut(s) | 707, 1085, 1156 |
| TatI | WGTACW | 1 cut(s) | 831 |
| TauI | GCSGC | 1 cut(s) | 515 |
| Tru1I | TTAA | 4 cut(s) | 317, 1091, 1137, 1206 |
| Tru9I | TTAA | 4 cut(s) | 317, 1091, 1137, 1206 |
| TscAI | CASTG | 4 cut(s) | 409, 814, 899, 1122 |
| TseFI | GTSAC | 1 cut(s) | 688 |
| TseI | GCWGC | 1 cut(s) | 1010 |
| Tsp45I | GTSAC | 1 cut(s) | 688 |
| TspDTI | ATGAA | 6 cut(s) | 218, 231, 384, 631, 833, 1085 |
| TspGWI | ACGGA | 2 cut(s) | 212, 878 |
| TspRI | CASTG | 4 cut(s) | 409, 814, 899, 1122 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 819 |
| VpaK11BI | GGWCC | 3 cut(s) | 109, 409, 791 |
| XapI | RAATTY | 2 cut(s) | 707, 1156 |
| XceI | RCATGY | 1 cut(s) | 251 |
| XmiI | GTMKAC | 1 cut(s) | 533 |
| XspI | CTAG | 4 cut(s) | 50, 837, 1064, 1082 |
| ZrmI | AGTACT | 1 cut(s) | 833 |