zinc-binding in reverse transcriptase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 698 |
| AclWI | GGATC | 1 cut(s) | 399 |
| AcoI | YGGCCR | 1 cut(s) | 456 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AcuI | CTGAAG | 3 cut(s) | 234, 315, 399 |
| AfaI | GTAC | 2 cut(s) | 516, 724 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 586 |
| AgsI | TTSAA | 5 cut(s) | 56, 242, 344, 758, 805 |
| AjnI | CCWGG | 1 cut(s) | 619 |
| AluBI | AGCT | 1 cut(s) | 30 |
| AluI | AGCT | 1 cut(s) | 30 |
| Alw21I | GWGCWC | 1 cut(s) | 163 |
| AlwI | GGATC | 1 cut(s) | 399 |
| AoxI | GGCC | 2 cut(s) | 456, 784 |
| ApeKI | GCWGC | 2 cut(s) | 30, 740 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AspA2I | CCTAGG | 1 cut(s) | 580 |
| AspS9I | GGNCC | 1 cut(s) | 784 |
| AsuHPI | GGTGA | 2 cut(s) | 162, 402 |
| AvrII | CCTAGG | 1 cut(s) | 580 |
| BaeGI | GKGCMC | 1 cut(s) | 573 |
| BanII | GRGCYC | 1 cut(s) | 532 |
| BbsI | GAAGAC | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 163 |
| BbvI | GCAGC | 2 cut(s) | 17, 752 |
| BccI | CCATC | 2 cut(s) | 199, 651 |
| BceAI | ACGGC | 1 cut(s) | 551 |
| BciT130I | CCWGG | 1 cut(s) | 621 |
| BfaI | CTAG | 3 cut(s) | 27, 354, 581 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BisI | GCNGC | 2 cut(s) | 31, 741 |
| BlnI | CCTAGG | 1 cut(s) | 580 |
| BlsI | GCNGC | 2 cut(s) | 32, 742 |
| BmcAI | AGTACT | 1 cut(s) | 724 |
| Bme1390I | CCNGG | 1 cut(s) | 621 |
| BmgT120I | GGNCC | 1 cut(s) | 784 |
| BmiI | GGNNCC | 1 cut(s) | 531 |
| BmrFI | CCNGG | 1 cut(s) | 621 |
| BpiI | GAAGAC | 1 cut(s) | 44 |
| BpmI | CTGGAG | 1 cut(s) | 603 |
| BsaJI | CCNNGG | 2 cut(s) | 580, 649 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 586 |
| Bse118I | RCCGGY | 1 cut(s) | 458 |
| Bse1I | ACTGG | 2 cut(s) | 34, 636 |
| BseBI | CCWGG | 1 cut(s) | 621 |
| BseDI | CCNNGG | 2 cut(s) | 580, 649 |
| BseGI | GGATG | 1 cut(s) | 643 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 586 |
| BseMII | CTCAG | 2 cut(s) | 243, 705 |
| BseNI | ACTGG | 2 cut(s) | 34, 636 |
| BseRI | GAGGAG | 1 cut(s) | 105 |
| BseSI | GKGCMC | 1 cut(s) | 573 |
| BseXI | GCAGC | 2 cut(s) | 17, 752 |
| BshFI | GGCC | 2 cut(s) | 458, 786 |
| BsiHKAI | GWGCWC | 1 cut(s) | 163 |
| BsiSI | CCGG | 1 cut(s) | 459 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 586 |
| BsmI | GAATGC | 1 cut(s) | 72 |
| BsnI | GGCC | 2 cut(s) | 458, 786 |
| Bsp1286I | GDGCHC | 3 cut(s) | 163, 532, 573 |
| Bsp143I | GATC | 2 cut(s) | 316, 391 |
| BspANI | GGCC | 2 cut(s) | 458, 786 |
| BspCNI | CTCAG | 2 cut(s) | 244, 706 |
| BspLI | GGNNCC | 1 cut(s) | 531 |
| BspPI | GGATC | 1 cut(s) | 399 |
| BsrFI | RCCGGY | 1 cut(s) | 458 |
| BsrI | ACTGG | 2 cut(s) | 34, 636 |
| BssAI | RCCGGY | 1 cut(s) | 458 |
| BssECI | CCNNGG | 2 cut(s) | 580, 649 |
| BssMI | GATC | 2 cut(s) | 316, 391 |
| BssT1I | CCWWGG | 2 cut(s) | 580, 649 |
| Bst2UI | CCWGG | 1 cut(s) | 621 |
| Bst4CI | ACNGT | 2 cut(s) | 86, 187 |
| Bst6I | CTCTTC | 2 cut(s) | 649, 713 |
| BstC8I | GCNNGC | 3 cut(s) | 159, 163, 460 |
| BstDEI | CTNAG | 2 cut(s) | 252, 714 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 584 |
| BstF5I | GGATG | 1 cut(s) | 643 |
| BstKTI | GATC | 2 cut(s) | 319, 394 |
| BstMBI | GATC | 2 cut(s) | 316, 391 |
| BstNI | CCWGG | 1 cut(s) | 621 |
| BstSCI | CCNGG | 1 cut(s) | 619 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstSLI | GKGCMC | 1 cut(s) | 573 |
| BstV1I | GCAGC | 2 cut(s) | 17, 752 |
| BstV2I | GAAGAC | 1 cut(s) | 44 |
| BsuRI | GGCC | 2 cut(s) | 458, 786 |
| BtsCI | GGATG | 1 cut(s) | 643 |
| Cac8I | GCNNGC | 3 cut(s) | 159, 163, 460 |
| Cfr10I | RCCGGY | 1 cut(s) | 458 |
| Cfr13I | GGNCC | 1 cut(s) | 784 |
| Csp6I | GTAC | 2 cut(s) | 515, 723 |
| CviAII | CATG | 2 cut(s) | 414, 437 |
| CviJI | RGCY | 7 cut(s) | 30, 307, 458, 530, 566, 642, 786 |
| CviKI_1 | RGCY | 7 cut(s) | 30, 307, 458, 530, 566, 642, 786 |
| CviQI | GTAC | 2 cut(s) | 515, 723 |
| DdeI | CTNAG | 2 cut(s) | 252, 714 |
| DpnI | GATC | 2 cut(s) | 318, 393 |
| DpnII | GATC | 2 cut(s) | 316, 391 |
| EaeI | YGGCCR | 1 cut(s) | 456 |
| Eam1104I | CTCTTC | 2 cut(s) | 649, 713 |
| EarI | CTCTTC | 2 cut(s) | 649, 713 |
| Eco130I | CCWWGG | 2 cut(s) | 580, 649 |
| Eco24I | GRGCYC | 1 cut(s) | 532 |
| Eco57I | CTGAAG | 3 cut(s) | 234, 315, 399 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 584 |
| EcoO109I | RGGNCCY | 1 cut(s) | 784 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 1 cut(s) | 619 |
| EcoT14I | CCWWGG | 2 cut(s) | 580, 649 |
| EcoT22I | ATGCAT | 1 cut(s) | 74 |
| EcoT38I | GRGCYC | 1 cut(s) | 532 |
| ErhI | CCWWGG | 2 cut(s) | 580, 649 |
| FaeI | CATG | 2 cut(s) | 417, 440 |
| FaiI | YATR | 8 cut(s) | 323, 362, 415, 438, 477, 511, 513, 698 |
| FatI | CATG | 2 cut(s) | 413, 436 |
| Fnu4HI | GCNGC | 2 cut(s) | 31, 741 |
| FokI | GGATG | 1 cut(s) | 630 |
| FriOI | GRGCYC | 1 cut(s) | 532 |
| Fsp4HI | GCNGC | 2 cut(s) | 31, 741 |
| FspBI | CTAG | 3 cut(s) | 27, 354, 581 |
| GluI | GCNGC | 2 cut(s) | 31, 741 |
| GsuI | CTGGAG | 1 cut(s) | 603 |
| HaeIII | GGCC | 2 cut(s) | 458, 786 |
| HapII | CCGG | 1 cut(s) | 459 |
| Hin1II | CATG | 2 cut(s) | 417, 440 |
| HinfI | GANTC | 4 cut(s) | 275, 340, 404, 440 |
| HpaII | CCGG | 1 cut(s) | 459 |
| HphI | GGTGA | 2 cut(s) | 162, 402 |
| Hpy188I | TCNGA | 5 cut(s) | 99, 280, 295, 379, 706 |
| Hpy188III | TCNNGA | 3 cut(s) | 272, 344, 689 |
| HpyAV | CCTTC | 3 cut(s) | 194, 209, 569 |
| HpyCH4III | ACNGT | 2 cut(s) | 86, 187 |
| HpyCH4V | TGCA | 5 cut(s) | 72, 417, 605, 626, 740 |
| HpyF3I | CTNAG | 2 cut(s) | 252, 714 |
| Hsp92II | CATG | 2 cut(s) | 417, 440 |
| KroI | GCCGGC | 1 cut(s) | 458 |
| KroNI | GCCGGC | 1 cut(s) | 460 |
| Kzo9I | GATC | 2 cut(s) | 316, 391 |
| LmnI | GCTCC | 2 cut(s) | 535, 596 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 752 |
| MaeI | CTAG | 3 cut(s) | 27, 354, 581 |
| MaeIII | GTNAC | 2 cut(s) | 21, 208 |
| MalI | GATC | 2 cut(s) | 318, 393 |
| MboI | GATC | 2 cut(s) | 316, 391 |
| MboII | GAAGA | 6 cut(s) | 44, 254, 308, 311, 666, 730 |
| MfeI | CAATTG | 1 cut(s) | 395 |
| MhlI | GDGCHC | 3 cut(s) | 163, 532, 573 |
| MluCI | AATT | 5 cut(s) | 4, 283, 395, 503, 758 |
| MnlI | CCTC | 1 cut(s) | 126 |
| Mph1103I | ATGCAT | 1 cut(s) | 74 |
| MroNI | GCCGGC | 1 cut(s) | 458 |
| MseI | TTAA | 4 cut(s) | 465, 486, 576, 761 |
| MslI | CAYNNNNRTG | 1 cut(s) | 412 |
| MspI | CCGG | 1 cut(s) | 459 |
| MspR9I | CCNGG | 1 cut(s) | 621 |
| MunI | CAATTG | 1 cut(s) | 395 |
| Mva1269I | GAATGC | 1 cut(s) | 72 |
| MvaI | CCWGG | 1 cut(s) | 621 |
| NaeI | GCCGGC | 1 cut(s) | 460 |
| NdeII | GATC | 2 cut(s) | 316, 391 |
| NgoMIV | GCCGGC | 1 cut(s) | 458 |
| NlaIII | CATG | 2 cut(s) | 417, 440 |
| NlaIV | GGNNCC | 1 cut(s) | 531 |
| NsiI | ATGCAT | 1 cut(s) | 74 |
| PctI | GAATGC | 1 cut(s) | 72 |
| PdiI | GCCGGC | 1 cut(s) | 460 |
| PfeI | GAWTC | 4 cut(s) | 275, 340, 404, 440 |
| PkrI | GCNGC | 2 cut(s) | 32, 742 |
| PsiI | TTATAA | 1 cut(s) | 698 |
| Psp6I | CCWGG | 1 cut(s) | 619 |
| PspGI | CCWGG | 1 cut(s) | 619 |
| PspN4I | GGNNCC | 1 cut(s) | 531 |
| PspPI | GGNCC | 1 cut(s) | 784 |
| RsaI | GTAC | 2 cut(s) | 516, 724 |
| RsaNI | GTAC | 2 cut(s) | 515, 723 |
| RseI | CAYNNNNRTG | 1 cut(s) | 412 |
| SaqAI | TTAA | 4 cut(s) | 465, 486, 576, 761 |
| SatI | GCNGC | 2 cut(s) | 31, 741 |
| Sau3AI | GATC | 2 cut(s) | 316, 391 |
| Sau96I | GGNCC | 1 cut(s) | 784 |
| ScaI | AGTACT | 1 cut(s) | 724 |
| ScrFI | CCNGG | 1 cut(s) | 621 |
| SduI | GDGCHC | 3 cut(s) | 163, 532, 573 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 412 |
| Sse9I | AATT | 5 cut(s) | 4, 283, 395, 503, 758 |
| SspMI | CTAG | 3 cut(s) | 27, 354, 581 |
| StyD4I | CCNGG | 1 cut(s) | 619 |
| StyI | CCWWGG | 2 cut(s) | 580, 649 |
| TaaI | ACNGT | 2 cut(s) | 86, 187 |
| TaqI | TCGA | 1 cut(s) | 774 |
| TasI | AATT | 5 cut(s) | 4, 283, 395, 503, 758 |
| TatI | WGTACW | 1 cut(s) | 722 |
| TfiI | GAWTC | 4 cut(s) | 275, 340, 404, 440 |
| Tru1I | TTAA | 4 cut(s) | 465, 486, 576, 761 |
| Tru9I | TTAA | 4 cut(s) | 465, 486, 576, 761 |
| TseI | GCWGC | 2 cut(s) | 30, 740 |
| TspDTI | ATGAA | 3 cut(s) | 17, 117, 213 |
| TspGWI | ACGGA | 1 cut(s) | 9 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 584 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XmaJI | CCTAGG | 1 cut(s) | 580 |
| XspI | CTAG | 3 cut(s) | 27, 354, 581 |
| ZrmI | AGTACT | 1 cut(s) | 724 |
| Zsp2I | ATGCAT | 1 cut(s) | 74 |