Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 281 |
| AclI | AACGTT | 1 cut(s) | 234 |
| AclWI | GGATC | 2 cut(s) | 263, 582 |
| AcsI | RAATTY | 1 cut(s) | 394 |
| AcuI | CTGAAG | 1 cut(s) | 182 |
| AfaI | GTAC | 4 cut(s) | 156, 300, 412, 659 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 592 |
| AflII | CTTAAG | 2 cut(s) | 224, 250 |
| AflIII | ACRYGT | 2 cut(s) | 30, 295 |
| AgsI | TTSAA | 3 cut(s) | 140, 590, 671 |
| AluBI | AGCT | 1 cut(s) | 362 |
| AluI | AGCT | 1 cut(s) | 362 |
| AlwI | GGATC | 2 cut(s) | 263, 582 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 577 |
| ApeKI | GCWGC | 1 cut(s) | 273 |
| ApoI | RAATTY | 1 cut(s) | 394 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 459, 491 |
| AspLEI | GCGC | 1 cut(s) | 340 |
| BanII | GRGCYC | 1 cut(s) | 127 |
| BauI | CACGAG | 1 cut(s) | 627 |
| BbsI | GAAGAC | 2 cut(s) | 147, 190 |
| BbvCI | CCTCAGC | 1 cut(s) | 333 |
| BbvI | GCAGC | 1 cut(s) | 260 |
| BccI | CCATC | 2 cut(s) | 233, 605 |
| BceAI | ACGGC | 1 cut(s) | 459 |
| BfaI | CTAG | 1 cut(s) | 519 |
| BfoI | RGCGCY | 1 cut(s) | 341 |
| BfrI | CTTAAG | 2 cut(s) | 224, 250 |
| BisI | GCNGC | 2 cut(s) | 274, 282 |
| BlsI | GCNGC | 2 cut(s) | 275, 283 |
| BmcAI | AGTACT | 1 cut(s) | 412 |
| BmrI | ACTGGG | 1 cut(s) | 98 |
| BmuI | ACTGGG | 1 cut(s) | 98 |
| BpiI | GAAGAC | 2 cut(s) | 147, 190 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 193, 225 |
| Bpu10I | CCTNAGC | 1 cut(s) | 333 |
| Bsa29I | ATCGAT | 1 cut(s) | 258 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 592 |
| Bse118I | RCCGGY | 1 cut(s) | 347 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseCI | ATCGAT | 1 cut(s) | 258 |
| BseGI | GGATG | 5 cut(s) | 10, 524, 541, 601, 616 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 592 |
| BseMII | CTCAG | 2 cut(s) | 324, 552 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| BseRI | GAGGAG | 1 cut(s) | 105 |
| BseXI | GCAGC | 1 cut(s) | 260 |
| BshVI | ATCGAT | 1 cut(s) | 258 |
| BsiSI | CCGG | 1 cut(s) | 348 |
| BslFI | GGGAC | 2 cut(s) | 41, 631 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 592 |
| BsmFI | GGGAC | 2 cut(s) | 41, 631 |
| Bsp1286I | GDGCHC | 1 cut(s) | 127 |
| Bsp143I | GATC | 2 cut(s) | 255, 574 |
| BspACI | CCGC | 1 cut(s) | 281 |
| BspCNI | CTCAG | 2 cut(s) | 325, 553 |
| BspDI | ATCGAT | 1 cut(s) | 258 |
| BspPI | GGATC | 2 cut(s) | 263, 582 |
| BspTI | CTTAAG | 2 cut(s) | 224, 250 |
| BsrFI | RCCGGY | 1 cut(s) | 347 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BssAI | RCCGGY | 1 cut(s) | 347 |
| BssMI | GATC | 2 cut(s) | 255, 574 |
| BssSI | CACGAG | 1 cut(s) | 627 |
| Bst2BI | CACGAG | 1 cut(s) | 627 |
| Bst4CI | ACNGT | 2 cut(s) | 491, 662 |
| Bst6I | CTCTTC | 1 cut(s) | 465 |
| BstAFI | CTTAAG | 2 cut(s) | 224, 250 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 314, 515 |
| BstC8I | GCNNGC | 1 cut(s) | 507 |
| BstDEI | CTNAG | 4 cut(s) | 195, 333, 464, 561 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 590 |
| BstF5I | GGATG | 5 cut(s) | 10, 524, 541, 601, 616 |
| BstH2I | RGCGCY | 1 cut(s) | 341 |
| BstHHI | GCGC | 1 cut(s) | 340 |
| BstKTI | GATC | 2 cut(s) | 258, 577 |
| BstMBI | GATC | 2 cut(s) | 255, 574 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 287, 314, 344, 515 |
| BstNSI | RCATGY | 2 cut(s) | 34, 299 |
| BstV1I | GCAGC | 1 cut(s) | 260 |
| BstV2I | GAAGAC | 2 cut(s) | 147, 190 |
| BstX2I | RGATCY | 1 cut(s) | 574 |
| BstYI | RGATCY | 1 cut(s) | 574 |
| Bsu15I | ATCGAT | 1 cut(s) | 258 |
| BsuTUI | ATCGAT | 1 cut(s) | 258 |
| BtsCI | GGATG | 5 cut(s) | 10, 524, 541, 601, 616 |
| Cac8I | GCNNGC | 1 cut(s) | 507 |
| CaiI | CAGNNNCTG | 1 cut(s) | 577 |
| CfoI | GCGC | 1 cut(s) | 340 |
| Cfr10I | RCCGGY | 1 cut(s) | 347 |
| ClaI | ATCGAT | 1 cut(s) | 258 |
| Csp6I | GTAC | 4 cut(s) | 155, 299, 411, 658 |
| CviAII | CATG | 4 cut(s) | 31, 277, 296, 325 |
| CviJI | RGCY | 9 cut(s) | 125, 194, 223, 245, 284, 332, 347, 362, 505 |
| CviKI_1 | RGCY | 9 cut(s) | 125, 194, 223, 245, 284, 332, 347, 362, 505 |
| CviQI | GTAC | 4 cut(s) | 155, 299, 411, 658 |
| DdeI | CTNAG | 4 cut(s) | 195, 333, 464, 561 |
| DpnI | GATC | 2 cut(s) | 257, 576 |
| DpnII | GATC | 2 cut(s) | 255, 574 |
| Eam1104I | CTCTTC | 1 cut(s) | 465 |
| EarI | CTCTTC | 1 cut(s) | 465 |
| Eco24I | GRGCYC | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 1 cut(s) | 182 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 590 |
| EcoT38I | GRGCYC | 1 cut(s) | 127 |
| FaeI | CATG | 4 cut(s) | 34, 280, 299, 328 |
| FaqI | GGGAC | 2 cut(s) | 41, 631 |
| FatI | CATG | 4 cut(s) | 30, 276, 295, 324 |
| FauNDI | CATATG | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 2 cut(s) | 274, 282 |
| FokI | GGATG | 5 cut(s) | 17, 511, 548, 608, 623 |
| FriOI | GRGCYC | 1 cut(s) | 127 |
| Fsp4HI | GCNGC | 2 cut(s) | 274, 282 |
| FspBI | CTAG | 1 cut(s) | 519 |
| GlaI | GCGC | 1 cut(s) | 339 |
| GluI | GCNGC | 2 cut(s) | 274, 282 |
| HaeII | RGCGCY | 1 cut(s) | 341 |
| HapII | CCGG | 1 cut(s) | 348 |
| HhaI | GCGC | 1 cut(s) | 340 |
| Hin1II | CATG | 4 cut(s) | 34, 280, 299, 328 |
| Hin6I | GCGC | 1 cut(s) | 338 |
| HinP1I | GCGC | 1 cut(s) | 338 |
| HincII | GTYRAC | 1 cut(s) | 117 |
| HindII | GTYRAC | 1 cut(s) | 117 |
| HinfI | GANTC | 1 cut(s) | 696 |
| HpaII | CCGG | 1 cut(s) | 348 |
| Hpy166II | GTNNAC | 2 cut(s) | 117, 353 |
| Hpy188I | TCNGA | 4 cut(s) | 162, 213, 529, 579 |
| Hpy188III | TCNNGA | 6 cut(s) | 137, 479, 544, 560, 572, 627 |
| Hpy8I | GTNNAC | 2 cut(s) | 117, 353 |
| HpyAV | CCTTC | 3 cut(s) | 157, 596, 714 |
| HpyCH4III | ACNGT | 2 cut(s) | 491, 662 |
| HpyCH4IV | ACGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 5 cut(s) | 276, 308, 322, 497, 509 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 287, 314, 344, 515 |
| HpyF3I | CTNAG | 4 cut(s) | 195, 333, 464, 561 |
| HpySE526I | ACGT | 1 cut(s) | 234 |
| Hsp92II | CATG | 4 cut(s) | 34, 280, 299, 328 |
| HspAI | GCGC | 1 cut(s) | 338 |
| Kzo9I | GATC | 2 cut(s) | 255, 574 |
| LpnPI | CCDG | 6 cut(s) | 117, 361, 529, 557, 573, 578 |
| Lsp1109I | GCAGC | 1 cut(s) | 260 |
| MaeI | CTAG | 1 cut(s) | 519 |
| MaeII | ACGT | 1 cut(s) | 234 |
| MaeIII | GTNAC | 2 cut(s) | 98, 431 |
| MalI | GATC | 2 cut(s) | 257, 576 |
| MboI | GATC | 2 cut(s) | 255, 574 |
| MboII | GAAGA | 4 cut(s) | 152, 195, 398, 452 |
| MflI | RGATCY | 1 cut(s) | 574 |
| MhlI | GDGCHC | 1 cut(s) | 127 |
| MluCI | AATT | 1 cut(s) | 394 |
| MmeI | TCCRAC | 1 cut(s) | 356 |
| MseI | TTAA | 3 cut(s) | 225, 231, 251 |
| MspCI | CTTAAG | 2 cut(s) | 224, 250 |
| MspI | CCGG | 1 cut(s) | 348 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 287, 314, 344, 515 |
| NdeI | CATATG | 1 cut(s) | 111 |
| NdeII | GATC | 2 cut(s) | 255, 574 |
| NlaIII | CATG | 4 cut(s) | 34, 280, 299, 328 |
| NmuCI | GTSAC | 1 cut(s) | 431 |
| NspI | RCATGY | 2 cut(s) | 34, 299 |
| PciI | ACATGT | 2 cut(s) | 30, 295 |
| PfeI | GAWTC | 1 cut(s) | 696 |
| PkrI | GCNGC | 2 cut(s) | 275, 283 |
| PscI | ACATGT | 2 cut(s) | 30, 295 |
| Psp1406I | AACGTT | 1 cut(s) | 234 |
| PstNI | CAGNNNCTG | 1 cut(s) | 577 |
| PsuI | RGATCY | 1 cut(s) | 574 |
| RsaI | GTAC | 4 cut(s) | 156, 300, 412, 659 |
| RsaNI | GTAC | 4 cut(s) | 155, 299, 411, 658 |
| SaqAI | TTAA | 3 cut(s) | 225, 231, 251 |
| SatI | GCNGC | 2 cut(s) | 274, 282 |
| Sau3AI | GATC | 2 cut(s) | 255, 574 |
| ScaI | AGTACT | 1 cut(s) | 412 |
| SduI | GDGCHC | 1 cut(s) | 127 |
| SmlI | CTYRAG | 2 cut(s) | 224, 250 |
| SmoI | CTYRAG | 2 cut(s) | 224, 250 |
| Sse9I | AATT | 1 cut(s) | 394 |
| SsiI | CCGC | 1 cut(s) | 281 |
| SspMI | CTAG | 1 cut(s) | 519 |
| TaaI | ACNGT | 2 cut(s) | 491, 662 |
| TaiI | ACGT | 1 cut(s) | 237 |
| TaqI | TCGA | 3 cut(s) | 258, 292, 707 |
| TasI | AATT | 1 cut(s) | 394 |
| TatI | WGTACW | 3 cut(s) | 154, 410, 657 |
| TauI | GCSGC | 1 cut(s) | 284 |
| TfiI | GAWTC | 1 cut(s) | 696 |
| Tru1I | TTAA | 3 cut(s) | 225, 231, 251 |
| Tru9I | TTAA | 3 cut(s) | 225, 231, 251 |
| TseFI | GTSAC | 1 cut(s) | 431 |
| TseI | GCWGC | 1 cut(s) | 273 |
| Tsp45I | GTSAC | 1 cut(s) | 431 |
| TspDTI | ATGAA | 5 cut(s) | 98, 276, 405, 440, 567 |
| Vha464I | CTTAAG | 2 cut(s) | 224, 250 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 590 |
| XapI | RAATTY | 1 cut(s) | 394 |
| XceI | RCATGY | 2 cut(s) | 34, 299 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 195 |
| XspI | CTAG | 1 cut(s) | 519 |
| ZrmI | AGTACT | 1 cut(s) | 412 |