ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 308 |
| Acc36I | ACCTGC | 2 cut(s) | 505, 2407 |
| AccB1I | GGYRCC | 1 cut(s) | 963 |
| AccBSI | CCGCTC | 1 cut(s) | 425 |
| AccI | GTMKAC | 1 cut(s) | 2115 |
| AccII | CGCG | 1 cut(s) | 2187 |
| AclWI | GGATC | 6 cut(s) | 395, 511, 1319, 1690, 2246, 2259 |
| AcoI | YGGCCR | 2 cut(s) | 976, 980 |
| AcsI | RAATTY | 5 cut(s) | 687, 1904, 1980, 2091, 2472 |
| AcuI | CTGAAG | 3 cut(s) | 855, 1432, 1584 |
| AcvI | CACGTG | 1 cut(s) | 2057 |
| AfaI | GTAC | 9 cut(s) | 20, 260, 317, 1114, 1784, 1953, 2078, 2275, 2449 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 389, 640, 641, 661, 682, 1165 |
| AflIII | ACRYGT | 1 cut(s) | 2054 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2438 |
| AhlI | ACTAGT | 3 cut(s) | 269, 1115, 2036 |
| AjiI | CACGTC | 1 cut(s) | 1508 |
| AjnI | CCWGG | 1 cut(s) | 559 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 672, 704, 1560, 1575, 1592, 1607 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1205, 1237 |
| Alw21I | GWGCWC | 1 cut(s) | 2367 |
| Alw26I | GTCTC | 1 cut(s) | 294 |
| AlwI | GGATC | 6 cut(s) | 395, 511, 1319, 1690, 2246, 2259 |
| Ama87I | CYCGRG | 1 cut(s) | 1051 |
| AoxI | GGCC | 5 cut(s) | 644, 976, 980, 1353, 1463 |
| ApeKI | GCWGC | 4 cut(s) | 113, 116, 1337, 1544 |
| ApoI | RAATTY | 5 cut(s) | 687, 1904, 1980, 2091, 2472 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1160, 1192, 1205, 1237 |
| AseI | ATTAAT | 1 cut(s) | 2016 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 864 |
| AspLEI | GCGC | 2 cut(s) | 2189, 2234 |
| AspS9I | GGNCC | 4 cut(s) | 380, 644, 664, 1595 |
| AsuC2I | CCSGG | 3 cut(s) | 384, 642, 2371 |
| AsuHPI | GGTGA | 7 cut(s) | 297, 404, 1039, 1424, 1769, 2382, 2434 |
| AvaI | CYCGRG | 1 cut(s) | 1051 |
| AvaII | GGWCC | 3 cut(s) | 380, 664, 1595 |
| BaeGI | GKGCMC | 1 cut(s) | 597 |
| BamHI | GGATCC | 1 cut(s) | 2251 |
| BanI | GGYRCC | 1 cut(s) | 963 |
| BauI | CACGAG | 1 cut(s) | 921 |
| BbrPI | CACGTG | 1 cut(s) | 2057 |
| BbsI | GAAGAC | 4 cut(s) | 819, 1236, 1399, 2306 |
| Bbv12I | GWGCWC | 1 cut(s) | 2367 |
| BbvI | GCAGC | 4 cut(s) | 100, 128, 1324, 1531 |
| BccI | CCATC | 9 cut(s) | 494, 833, 947, 1370, 1487, 1495, 1534, 2198, 2504 |
| BciT130I | CCWGG | 1 cut(s) | 561 |
| BclI | TGATCA | 2 cut(s) | 52, 75 |
| BcnI | CCSGG | 3 cut(s) | 384, 642, 2371 |
| BcoDI | GTCTC | 1 cut(s) | 294 |
| BcuI | ACTAGT | 3 cut(s) | 269, 1115, 2036 |
| BfaI | CTAG | 8 cut(s) | 270, 656, 1116, 1343, 1676, 1841, 2001, 2037 |
| BfmI | CTRYAG | 6 cut(s) | 114, 235, 727, 2116, 2424, 2451 |
| BfuAI | ACCTGC | 2 cut(s) | 505, 2407 |
| BisI | GCNGC | 5 cut(s) | 114, 117, 450, 1338, 1545 |
| BlsI | GCNGC | 5 cut(s) | 115, 118, 451, 1339, 1546 |
| BmcAI | AGTACT | 2 cut(s) | 20, 2449 |
| Bme1390I | CCNGG | 4 cut(s) | 384, 561, 642, 2371 |
| Bme18I | GGWCC | 3 cut(s) | 380, 664, 1595 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2438 |
| BmeT110I | CYCGRG | 1 cut(s) | 1051 |
| BmgBI | CACGTC | 1 cut(s) | 1508 |
| BmgT120I | GGNCC | 4 cut(s) | 380, 644, 664, 1595 |
| BmiI | GGNNCC | 7 cut(s) | 421, 645, 665, 666, 965, 2253, 2466 |
| BmrFI | CCNGG | 4 cut(s) | 384, 561, 642, 2371 |
| BmsI | GCATC | 4 cut(s) | 1058, 1184, 1541, 2288 |
| BpiI | GAAGAC | 4 cut(s) | 819, 1236, 1399, 2306 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 479, 511 |
| BpuEI | CTTGAG | 3 cut(s) | 151, 1866, 1894 |
| BpuMI | CCSGG | 3 cut(s) | 384, 642, 2371 |
| BsaAI | YACGTR | 1 cut(s) | 2057 |
| BsaBI | GATNNNNATC | 1 cut(s) | 399 |
| BsaJI | CCNNGG | 4 cut(s) | 37, 336, 641, 1159 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1617, 1647, 1840, 1870, 2118, 2148 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 389, 640, 641, 661, 682, 1165 |
| Bse118I | RCCGGY | 1 cut(s) | 978 |
| Bse1I | ACTGG | 5 cut(s) | 979, 1195, 1944, 2028, 2445 |
| Bse3DI | GCAATG | 2 cut(s) | 448, 2088 |
| Bse8I | GATNNNNATC | 1 cut(s) | 399 |
| BseBI | CCWGG | 1 cut(s) | 561 |
| BseDI | CCNNGG | 4 cut(s) | 37, 336, 641, 1159 |
| BseGI | GGATG | 4 cut(s) | 620, 651, 1199, 1773 |
| BseJI | GATNNNNATC | 1 cut(s) | 399 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 389, 640, 641, 661, 682, 1165 |
| BseMI | GCAATG | 2 cut(s) | 448, 2088 |
| BseMII | CTCAG | 1 cut(s) | 2064 |
| BseNI | ACTGG | 5 cut(s) | 979, 1195, 1944, 2028, 2445 |
| BseRI | GAGGAG | 1 cut(s) | 154 |
| BseSI | GKGCMC | 1 cut(s) | 597 |
| BseXI | GCAGC | 4 cut(s) | 100, 128, 1324, 1531 |
| BsgI | GTGCAG | 2 cut(s) | 2355, 2385 |
| Bsh1236I | CGCG | 1 cut(s) | 2187 |
| BshFI | GGCC | 5 cut(s) | 646, 978, 982, 1355, 1465 |
| BshNI | GGYRCC | 1 cut(s) | 963 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2367 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1051 |
| BsiSI | CCGG | 4 cut(s) | 383, 641, 979, 2370 |
| BslFI | GGGAC | 4 cut(s) | 146, 677, 1518, 2065 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 389, 640, 641, 661, 682, 1165 |
| BsmAI | GTCTC | 1 cut(s) | 294 |
| BsmFI | GGGAC | 4 cut(s) | 146, 677, 1518, 2065 |
| BsmI | GAATGC | 2 cut(s) | 772, 1749 |
| BsnI | GGCC | 5 cut(s) | 646, 978, 982, 1355, 1465 |
| BsoBI | CYCGRG | 1 cut(s) | 1051 |
| Bsp1286I | GDGCHC | 2 cut(s) | 597, 2367 |
| Bsp19I | CCATGG | 1 cut(s) | 37 |
| BspANI | GGCC | 5 cut(s) | 646, 978, 982, 1355, 1465 |
| BspCNI | CTCAG | 1 cut(s) | 2065 |
| BspFNI | CGCG | 1 cut(s) | 2187 |
| BspLI | GGNNCC | 7 cut(s) | 421, 645, 665, 666, 965, 2253, 2466 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspMI | ACCTGC | 2 cut(s) | 505, 2407 |
| BspPI | GGATC | 6 cut(s) | 395, 511, 1319, 1690, 2246, 2259 |
| BspT107I | GGYRCC | 1 cut(s) | 963 |
| BsrBI | CCGCTC | 1 cut(s) | 425 |
| BsrDI | GCAATG | 2 cut(s) | 448, 2088 |
| BsrFI | RCCGGY | 1 cut(s) | 978 |
| BsrI | ACTGG | 5 cut(s) | 979, 1195, 1944, 2028, 2445 |
| BssAI | RCCGGY | 1 cut(s) | 978 |
| BssECI | CCNNGG | 4 cut(s) | 37, 336, 641, 1159 |
| BssSI | CACGAG | 1 cut(s) | 921 |
| BssT1I | CCWWGG | 3 cut(s) | 37, 336, 1159 |
| Bst2BI | CACGAG | 1 cut(s) | 921 |
| Bst2UI | CCWGG | 1 cut(s) | 561 |
| Bst6I | CTCTTC | 2 cut(s) | 1637, 1755 |
| BstBAI | YACGTR | 1 cut(s) | 2057 |
| BstC8I | GCNNGC | 4 cut(s) | 676, 980, 1853, 2415 |
| BstDEI | CTNAG | 2 cut(s) | 1458, 2073 |
| BstDSI | CCRYGG | 1 cut(s) | 37 |
| BstEII | GGTNACC | 1 cut(s) | 2440 |
| BstF5I | GGATG | 4 cut(s) | 620, 651, 1199, 1773 |
| BstFNI | CGCG | 1 cut(s) | 2187 |
| BstHHI | GCGC | 2 cut(s) | 2189, 2234 |
| BstMAI | GTCTC | 1 cut(s) | 294 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 211, 1334, 1524, 1897 |
| BstNI | CCWGG | 1 cut(s) | 561 |
| BstNSI | RCATGY | 3 cut(s) | 1789, 2068, 2438 |
| BstPI | GGTNACC | 1 cut(s) | 2440 |
| BstSCI | CCNGG | 4 cut(s) | 382, 559, 640, 2369 |
| BstSFI | CTRYAG | 6 cut(s) | 114, 235, 727, 2116, 2424, 2451 |
| BstSLI | GKGCMC | 1 cut(s) | 597 |
| BstUI | CGCG | 1 cut(s) | 2187 |
| BstV1I | GCAGC | 4 cut(s) | 100, 128, 1324, 1531 |
| BstV2I | GAAGAC | 4 cut(s) | 819, 1236, 1399, 2306 |
| BstX2I | RGATCY | 2 cut(s) | 1311, 2251 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 974 |
| BstYI | RGATCY | 2 cut(s) | 1311, 2251 |
| BsuRI | GGCC | 5 cut(s) | 646, 978, 982, 1355, 1465 |
| BtgI | CCRYGG | 1 cut(s) | 37 |
| BtrI | CACGTC | 1 cut(s) | 1508 |
| BtsCI | GGATG | 4 cut(s) | 620, 651, 1199, 1773 |
| BtsIMutI | CAGTG | 2 cut(s) | 938, 1114 |
| BveI | ACCTGC | 2 cut(s) | 505, 2407 |
| Cac8I | GCNNGC | 4 cut(s) | 676, 980, 1853, 2415 |
| CfoI | GCGC | 2 cut(s) | 2189, 2234 |
| Cfr10I | RCCGGY | 1 cut(s) | 978 |
| Cfr13I | GGNCC | 4 cut(s) | 380, 644, 664, 1595 |
| Csp6I | GTAC | 9 cut(s) | 19, 259, 316, 1113, 1783, 1952, 2077, 2274, 2448 |
| CviAII | CATG | 9 cut(s) | 38, 104, 565, 615, 1786, 2065, 2211, 2353, 2435 |
| CviQI | GTAC | 9 cut(s) | 19, 259, 316, 1113, 1783, 1952, 2077, 2274, 2448 |
| DdeI | CTNAG | 2 cut(s) | 1458, 2073 |
| DraI | TTTAAA | 2 cut(s) | 1039, 1938 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 308 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2438 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 308 |
| EaeI | YGGCCR | 2 cut(s) | 976, 980 |
| Eam1104I | CTCTTC | 2 cut(s) | 1637, 1755 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2438 |
| EarI | CTCTTC | 2 cut(s) | 1637, 1755 |
| EciI | GGCGGA | 1 cut(s) | 1013 |
| Eco130I | CCWWGG | 3 cut(s) | 37, 336, 1159 |
| Eco147I | AGGCCT | 1 cut(s) | 1465 |
| Eco47I | GGWCC | 3 cut(s) | 380, 664, 1595 |
| Eco57I | CTGAAG | 3 cut(s) | 855, 1432, 1584 |
| Eco72I | CACGTG | 1 cut(s) | 2057 |
| Eco88I | CYCGRG | 1 cut(s) | 1051 |
| Eco91I | GGTNACC | 1 cut(s) | 2440 |
| EcoO109I | RGGNCCY | 2 cut(s) | 644, 664 |
| EcoO65I | GGTNACC | 1 cut(s) | 2440 |
| EcoRII | CCWGG | 1 cut(s) | 559 |
| EcoT14I | CCWWGG | 3 cut(s) | 37, 336, 1159 |
| EcoT22I | ATGCAT | 2 cut(s) | 1534, 2212 |
| ErhI | CCWWGG | 3 cut(s) | 37, 336, 1159 |
| FaeI | CATG | 9 cut(s) | 41, 107, 568, 618, 1789, 2068, 2214, 2356, 2438 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1875, 1907, 2298, 2330 |
| FaqI | GGGAC | 4 cut(s) | 146, 677, 1518, 2065 |
| FatI | CATG | 9 cut(s) | 37, 103, 564, 614, 1785, 2064, 2210, 2352, 2434 |
| FauI | CCCGC | 1 cut(s) | 683 |
| FauNDI | CATATG | 1 cut(s) | 847 |
| FbaI | TGATCA | 2 cut(s) | 52, 75 |
| FblI | GTMKAC | 1 cut(s) | 2115 |
| Fnu4HI | GCNGC | 5 cut(s) | 114, 117, 450, 1338, 1545 |
| FokI | GGATG | 4 cut(s) | 607, 638, 1206, 1780 |
| FseI | GGCCGGCC | 1 cut(s) | 982 |
| Fsp4HI | GCNGC | 5 cut(s) | 114, 117, 450, 1338, 1545 |
| FspBI | CTAG | 8 cut(s) | 270, 656, 1116, 1343, 1676, 1841, 2001, 2037 |
| GlaI | GCGC | 2 cut(s) | 2188, 2233 |
| GluI | GCNGC | 5 cut(s) | 114, 117, 450, 1338, 1545 |
| HaeIII | GGCC | 5 cut(s) | 646, 978, 982, 1355, 1465 |
| HapII | CCGG | 4 cut(s) | 383, 641, 979, 2370 |
| HhaI | GCGC | 2 cut(s) | 2189, 2234 |
| Hin1II | CATG | 9 cut(s) | 41, 107, 568, 618, 1789, 2068, 2214, 2356, 2438 |
| Hin6I | GCGC | 2 cut(s) | 2187, 2232 |
| HinP1I | GCGC | 2 cut(s) | 2187, 2232 |
| HincII | GTYRAC | 3 cut(s) | 580, 628, 2376 |
| HindII | GTYRAC | 3 cut(s) | 580, 628, 2376 |
| HindIII | AAGCTT | 3 cut(s) | 88, 884, 1574 |
| HinfI | GANTC | 9 cut(s) | 302, 341, 464, 747, 865, 1820, 1875, 2267, 2341 |
| HpaI | GTTAAC | 1 cut(s) | 628 |
| HpaII | CCGG | 4 cut(s) | 383, 641, 979, 2370 |
| HphI | GGTGA | 7 cut(s) | 297, 404, 1039, 1424, 1769, 2382, 2434 |
| Hpy166II | GTNNAC | 7 cut(s) | 198, 580, 628, 1213, 2116, 2274, 2376 |
| Hpy188III | TCNNGA | 8 cut(s) | 73, 1065, 1315, 1450, 1802, 1841, 1911, 2072 |
| Hpy8I | GTNNAC | 7 cut(s) | 198, 580, 628, 1213, 2116, 2274, 2376 |
| HpyAV | CCTTC | 5 cut(s) | 692, 1577, 1865, 2081, 2222 |
| HpyCH4IV | ACGT | 6 cut(s) | 200, 611, 1507, 1950, 2056, 2515 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 211, 1334, 1524, 1897 |
| HpyF3I | CTNAG | 2 cut(s) | 1458, 2073 |
| HpySE526I | ACGT | 6 cut(s) | 200, 611, 1507, 1950, 2056, 2515 |
| Hsp92II | CATG | 9 cut(s) | 41, 107, 568, 618, 1789, 2068, 2214, 2356, 2438 |
| HspAI | GCGC | 2 cut(s) | 2187, 2232 |
| KflI | GGGWCCC | 1 cut(s) | 664 |
| KroI | GCCGGC | 1 cut(s) | 978 |
| KroNI | GCCGGC | 1 cut(s) | 980 |
| Ksp22I | TGATCA | 2 cut(s) | 52, 75 |
| KspAI | GTTAAC | 1 cut(s) | 628 |
| LmnI | GCTCC | 3 cut(s) | 425, 430, 1848 |
| Lsp1109I | GCAGC | 4 cut(s) | 100, 128, 1324, 1531 |
| LweI | GCATC | 4 cut(s) | 1058, 1184, 1541, 2288 |
| MaeI | CTAG | 8 cut(s) | 270, 656, 1116, 1343, 1676, 1841, 2001, 2037 |
| MaeII | ACGT | 6 cut(s) | 200, 611, 1507, 1950, 2056, 2515 |
| MbiI | CCGCTC | 1 cut(s) | 425 |
| MfeI | CAATTG | 1 cut(s) | 680 |
| MflI | RGATCY | 2 cut(s) | 1311, 2251 |
| MhlI | GDGCHC | 2 cut(s) | 597, 2367 |
| MlyI | GAGTC | 2 cut(s) | 296, 335 |
| MmeI | TCCRAC | 4 cut(s) | 255, 369, 441, 692 |
| Mph1103I | ATGCAT | 2 cut(s) | 1534, 2212 |
| MroNI | GCCGGC | 1 cut(s) | 978 |
| MroXI | GAANNNNTTC | 1 cut(s) | 864 |
| MspI | CCGG | 4 cut(s) | 383, 641, 979, 2370 |
| MspR9I | CCNGG | 4 cut(s) | 384, 561, 642, 2371 |
| MunI | CAATTG | 1 cut(s) | 680 |
| Mva1269I | GAATGC | 2 cut(s) | 772, 1749 |
| MvaI | CCWGG | 1 cut(s) | 561 |
| MvnI | CGCG | 1 cut(s) | 2187 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 211, 1334, 1524, 1897 |
| NaeI | GCCGGC | 1 cut(s) | 980 |
| NciI | CCSGG | 3 cut(s) | 384, 642, 2371 |
| NcoI | CCATGG | 1 cut(s) | 37 |
| NdeI | CATATG | 1 cut(s) | 847 |
| NgoMIV | GCCGGC | 1 cut(s) | 978 |
| NlaIII | CATG | 9 cut(s) | 41, 107, 568, 618, 1789, 2068, 2214, 2356, 2438 |
| NlaIV | GGNNCC | 7 cut(s) | 421, 645, 665, 666, 965, 2253, 2466 |
| NmuCI | GTSAC | 2 cut(s) | 1151, 2440 |
| NsiI | ATGCAT | 2 cut(s) | 1534, 2212 |
| NspI | RCATGY | 3 cut(s) | 1789, 2068, 2438 |
| PaeR7I | CTCGAG | 1 cut(s) | 1051 |
| PceI | AGGCCT | 1 cut(s) | 1465 |
| PctI | GAATGC | 2 cut(s) | 772, 1749 |
| PdiI | GCCGGC | 1 cut(s) | 980 |
| PdmI | GAANNNNTTC | 1 cut(s) | 864 |
| PfeI | GAWTC | 7 cut(s) | 464, 747, 865, 1820, 1875, 2267, 2341 |
| PkrI | GCNGC | 5 cut(s) | 115, 118, 451, 1339, 1546 |
| PleI | GAGTC | 2 cut(s) | 296, 335 |
| PmaCI | CACGTG | 1 cut(s) | 2057 |
| PmlI | CACGTG | 1 cut(s) | 2057 |
| PpsI | GAGTC | 2 cut(s) | 296, 335 |
| Ppu21I | YACGTR | 1 cut(s) | 2057 |
| PpuMI | RGGWCCY | 1 cut(s) | 664 |
| PshBI | ATTAAT | 1 cut(s) | 2016 |
| Psp5II | RGGWCCY | 1 cut(s) | 664 |
| Psp6I | CCWGG | 1 cut(s) | 559 |
| PspCI | CACGTG | 1 cut(s) | 2057 |
| PspEI | GGTNACC | 1 cut(s) | 2440 |
| PspGI | CCWGG | 1 cut(s) | 559 |
| PspN4I | GGNNCC | 7 cut(s) | 421, 645, 665, 666, 965, 2253, 2466 |
| PspPI | GGNCC | 4 cut(s) | 380, 644, 664, 1595 |
| PspPPI | RGGWCCY | 1 cut(s) | 664 |
| PspXI | VCTCGAGB | 1 cut(s) | 1051 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PsuI | RGATCY | 2 cut(s) | 1311, 2251 |
| RigI | GGCCGGCC | 1 cut(s) | 982 |
| RsaI | GTAC | 9 cut(s) | 20, 260, 317, 1114, 1784, 1953, 2078, 2275, 2449 |
| RsaNI | GTAC | 9 cut(s) | 19, 259, 316, 1113, 1783, 1952, 2077, 2274, 2448 |
| SatI | GCNGC | 5 cut(s) | 114, 117, 450, 1338, 1545 |
| Sau96I | GGNCC | 4 cut(s) | 380, 644, 664, 1595 |
| ScaI | AGTACT | 2 cut(s) | 20, 2449 |
| SchI | GAGTC | 2 cut(s) | 296, 335 |
| ScrFI | CCNGG | 4 cut(s) | 384, 561, 642, 2371 |
| SduI | GDGCHC | 2 cut(s) | 597, 2367 |
| SfaNI | GCATC | 4 cut(s) | 1058, 1184, 1541, 2288 |
| SfcI | CTRYAG | 6 cut(s) | 114, 235, 727, 2116, 2424, 2451 |
| Sfr274I | CTCGAG | 1 cut(s) | 1051 |
| SinI | GGWCC | 3 cut(s) | 380, 664, 1595 |
| SlaI | CTCGAG | 1 cut(s) | 1051 |
| SmlI | CTYRAG | 4 cut(s) | 166, 1051, 1881, 1909 |
| SmoI | CTYRAG | 4 cut(s) | 166, 1051, 1881, 1909 |
| SpeI | ACTAGT | 3 cut(s) | 269, 1115, 2036 |
| SseBI | AGGCCT | 1 cut(s) | 1465 |
| SspI | AATATT | 1 cut(s) | 127 |
| SspMI | CTAG | 8 cut(s) | 270, 656, 1116, 1343, 1676, 1841, 2001, 2037 |
| StuI | AGGCCT | 1 cut(s) | 1465 |
| StyD4I | CCNGG | 4 cut(s) | 382, 559, 640, 2369 |
| StyI | CCWWGG | 3 cut(s) | 37, 336, 1159 |
| TaiI | ACGT | 6 cut(s) | 203, 614, 1510, 1953, 2059, 2518 |
| TaqI | TCGA | 4 cut(s) | 1052, 1240, 1425, 2344 |
| TatI | WGTACW | 4 cut(s) | 18, 1782, 2273, 2447 |
| TauI | GCSGC | 1 cut(s) | 452 |
| TfiI | GAWTC | 7 cut(s) | 464, 747, 865, 1820, 1875, 2267, 2341 |
| TscAI | CASTG | 2 cut(s) | 938, 1114 |
| TseFI | GTSAC | 2 cut(s) | 1151, 2440 |
| TseI | GCWGC | 4 cut(s) | 113, 116, 1337, 1544 |
| Tsp45I | GTSAC | 2 cut(s) | 1151, 2440 |
| TspGWI | ACGGA | 2 cut(s) | 20, 613 |
| TspRI | CASTG | 2 cut(s) | 938, 1114 |
| VpaK11BI | GGWCC | 3 cut(s) | 380, 664, 1595 |
| VspI | ATTAAT | 1 cut(s) | 2016 |
| XapI | RAATTY | 5 cut(s) | 687, 1904, 1980, 2091, 2472 |
| XbaI | TCTAGA | 1 cut(s) | 1840 |
| XceI | RCATGY | 3 cut(s) | 1789, 2068, 2438 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2020 |
| XhoI | CTCGAG | 1 cut(s) | 1051 |
| XmiI | GTMKAC | 1 cut(s) | 2115 |
| XmnI | GAANNNNTTC | 1 cut(s) | 864 |
| XspI | CTAG | 8 cut(s) | 270, 656, 1116, 1343, 1676, 1841, 2001, 2037 |
| ZrmI | AGTACT | 2 cut(s) | 20, 2449 |
| Zsp2I | ATGCAT | 2 cut(s) | 1534, 2212 |