Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 242, 287 |
| AclWI | GGATC | 2 cut(s) | 343, 353 |
| AcvI | CACGTG | 1 cut(s) | 127 |
| AflIII | ACRYGT | 1 cut(s) | 126 |
| AgsI | TTSAA | 3 cut(s) | 133, 205, 250 |
| AjnI | CCWGG | 1 cut(s) | 362 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 97, 129 |
| AluBI | AGCT | 1 cut(s) | 209 |
| AluI | AGCT | 1 cut(s) | 209 |
| Alw21I | GWGCWC | 1 cut(s) | 303 |
| AlwI | GGATC | 2 cut(s) | 343, 353 |
| AoxI | GGCC | 1 cut(s) | 86 |
| AseI | ATTAAT | 2 cut(s) | 11, 188 |
| AspS9I | GGNCC | 1 cut(s) | 87 |
| AsuHPI | GGTGA | 2 cut(s) | 341, 361 |
| BbrPI | CACGTG | 1 cut(s) | 127 |
| Bbv12I | GWGCWC | 1 cut(s) | 303 |
| BccI | CCATC | 2 cut(s) | 153, 326 |
| BciT130I | CCWGG | 1 cut(s) | 364 |
| Bme1390I | CCNGG | 1 cut(s) | 364 |
| BmgT120I | GGNCC | 1 cut(s) | 87 |
| BmrFI | CCNGG | 1 cut(s) | 364 |
| BmsI | GCATC | 3 cut(s) | 13, 229, 302 |
| BpmI | CTGGAG | 2 cut(s) | 287, 373 |
| BsaAI | YACGTR | 1 cut(s) | 127 |
| BsaJI | CCNNGG | 1 cut(s) | 362 |
| Bse118I | RCCGGY | 1 cut(s) | 84 |
| BseBI | CCWGG | 1 cut(s) | 364 |
| BseDI | CCNNGG | 1 cut(s) | 362 |
| BseGI | GGATG | 4 cut(s) | 49, 164, 244, 317 |
| BshFI | GGCC | 1 cut(s) | 88 |
| BsiHKAI | GWGCWC | 1 cut(s) | 303 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BsnI | GGCC | 1 cut(s) | 88 |
| Bsp1286I | GDGCHC | 1 cut(s) | 303 |
| Bsp143I | GATC | 2 cut(s) | 335, 358 |
| BspACI | CCGC | 2 cut(s) | 242, 287 |
| BspANI | GGCC | 1 cut(s) | 88 |
| BspPI | GGATC | 2 cut(s) | 343, 353 |
| BsrFI | RCCGGY | 1 cut(s) | 84 |
| BssAI | RCCGGY | 1 cut(s) | 84 |
| BssECI | CCNNGG | 1 cut(s) | 362 |
| BssMI | GATC | 2 cut(s) | 335, 358 |
| Bst2UI | CCWGG | 1 cut(s) | 364 |
| BstBAI | YACGTR | 1 cut(s) | 127 |
| BstC8I | GCNNGC | 1 cut(s) | 86 |
| BstF5I | GGATG | 4 cut(s) | 49, 164, 244, 317 |
| BstKTI | GATC | 2 cut(s) | 338, 361 |
| BstMBI | GATC | 2 cut(s) | 335, 358 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstNI | CCWGG | 1 cut(s) | 364 |
| BstNSI | RCATGY | 1 cut(s) | 228 |
| BstSCI | CCNGG | 1 cut(s) | 362 |
| BsuRI | GGCC | 1 cut(s) | 88 |
| BtsCI | GGATG | 4 cut(s) | 49, 164, 244, 317 |
| Cac8I | GCNNGC | 1 cut(s) | 86 |
| Cfr10I | RCCGGY | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 1 cut(s) | 87 |
| CviAII | CATG | 3 cut(s) | 225, 235, 270 |
| CviJI | RGCY | 5 cut(s) | 64, 88, 149, 209, 367 |
| CviKI_1 | RGCY | 5 cut(s) | 64, 88, 149, 209, 367 |
| DpnI | GATC | 2 cut(s) | 337, 360 |
| DpnII | GATC | 2 cut(s) | 335, 358 |
| Eco72I | CACGTG | 1 cut(s) | 127 |
| EcoRII | CCWGG | 1 cut(s) | 362 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 3 cut(s) | 228, 238, 273 |
| FaiI | YATR | 8 cut(s) | 82, 122, 226, 236, 267, 271, 284, 407 |
| FatI | CATG | 3 cut(s) | 224, 234, 269 |
| FauI | CCCGC | 1 cut(s) | 280 |
| FokI | GGATG | 4 cut(s) | 56, 171, 251, 324 |
| GsuI | CTGGAG | 2 cut(s) | 287, 373 |
| HaeIII | GGCC | 1 cut(s) | 88 |
| HapII | CCGG | 1 cut(s) | 85 |
| Hin1II | CATG | 3 cut(s) | 228, 238, 273 |
| HinfI | GANTC | 1 cut(s) | 182 |
| HpaII | CCGG | 1 cut(s) | 85 |
| HphI | GGTGA | 2 cut(s) | 341, 361 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 304, 352 |
| HpyAV | CCTTC | 2 cut(s) | 301, 403 |
| HpyCH4IV | ACGT | 1 cut(s) | 126 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 124, 172, 315 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpySE526I | ACGT | 1 cut(s) | 126 |
| Hsp92II | CATG | 3 cut(s) | 228, 238, 273 |
| KroI | GCCGGC | 1 cut(s) | 84 |
| KroNI | GCCGGC | 1 cut(s) | 86 |
| Kzo9I | GATC | 2 cut(s) | 335, 358 |
| LmnI | GCTCC | 1 cut(s) | 306 |
| LpnPI | CCDG | 5 cut(s) | 98, 317, 337, 349, 376 |
| LweI | GCATC | 3 cut(s) | 13, 229, 302 |
| MaeII | ACGT | 1 cut(s) | 126 |
| MalI | GATC | 2 cut(s) | 337, 360 |
| MboI | GATC | 2 cut(s) | 335, 358 |
| MboII | GAAGA | 2 cut(s) | 64, 262 |
| MhlI | GDGCHC | 1 cut(s) | 303 |
| MluCI | AATT | 4 cut(s) | 8, 77, 189, 402 |
| MlyI | GAGTC | 1 cut(s) | 176 |
| MmeI | TCCRAC | 2 cut(s) | 75, 159 |
| MnlI | CCTC | 5 cut(s) | 12, 26, 34, 91, 156 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroNI | GCCGGC | 1 cut(s) | 84 |
| MseI | TTAA | 3 cut(s) | 11, 167, 188 |
| MspI | CCGG | 1 cut(s) | 85 |
| MspR9I | CCNGG | 1 cut(s) | 364 |
| MvaI | CCWGG | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NaeI | GCCGGC | 1 cut(s) | 86 |
| NdeII | GATC | 2 cut(s) | 335, 358 |
| NgoMIV | GCCGGC | 1 cut(s) | 84 |
| NlaIII | CATG | 3 cut(s) | 228, 238, 273 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 228 |
| PdiI | GCCGGC | 1 cut(s) | 86 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PmaCI | CACGTG | 1 cut(s) | 127 |
| PmlI | CACGTG | 1 cut(s) | 127 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| Ppu21I | YACGTR | 1 cut(s) | 127 |
| PshBI | ATTAAT | 2 cut(s) | 11, 188 |
| Psp6I | CCWGG | 1 cut(s) | 362 |
| PspCI | CACGTG | 1 cut(s) | 127 |
| PspGI | CCWGG | 1 cut(s) | 362 |
| PspPI | GGNCC | 1 cut(s) | 87 |
| SaqAI | TTAA | 3 cut(s) | 11, 167, 188 |
| Sau3AI | GATC | 2 cut(s) | 335, 358 |
| Sau96I | GGNCC | 1 cut(s) | 87 |
| SchI | GAGTC | 1 cut(s) | 176 |
| ScrFI | CCNGG | 1 cut(s) | 364 |
| SduI | GDGCHC | 1 cut(s) | 303 |
| SetI | ASST | 6 cut(s) | 23, 129, 167, 179, 211, 259 |
| SfaNI | GCATC | 3 cut(s) | 13, 229, 302 |
| Sse9I | AATT | 4 cut(s) | 8, 77, 189, 402 |
| SsiI | CCGC | 2 cut(s) | 242, 287 |
| StyD4I | CCNGG | 1 cut(s) | 362 |
| TaiI | ACGT | 1 cut(s) | 129 |
| TasI | AATT | 4 cut(s) | 8, 77, 189, 402 |
| Tru1I | TTAA | 3 cut(s) | 11, 167, 188 |
| Tru9I | TTAA | 3 cut(s) | 11, 167, 188 |
| TspDTI | ATGAA | 1 cut(s) | 223 |
| VspI | ATTAAT | 2 cut(s) | 11, 188 |
| XceI | RCATGY | 1 cut(s) | 228 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |