Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 486 |
| Acc16I | TGCGCA | 1 cut(s) | 522 |
| Acc36I | ACCTGC | 3 cut(s) | 454, 486, 524 |
| AccBSI | CCGCTC | 1 cut(s) | 119 |
| AccII | CGCG | 2 cut(s) | 457, 604 |
| AcsI | RAATTY | 1 cut(s) | 298 |
| AcvI | CACGTG | 1 cut(s) | 81 |
| AfaI | GTAC | 1 cut(s) | 369 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 70, 195, 414, 434, 768 |
| AflII | CTTAAG | 1 cut(s) | 341 |
| AgsI | TTSAA | 2 cut(s) | 180, 380 |
| AjnI | CCWGG | 1 cut(s) | 433 |
| AluBI | AGCT | 4 cut(s) | 13, 107, 111, 766 |
| AluI | AGCT | 4 cut(s) | 13, 107, 111, 766 |
| Alw21I | GWGCWC | 2 cut(s) | 15, 425 |
| Alw26I | GTCTC | 1 cut(s) | 347 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 658, 695 |
| Ama87I | CYCGRG | 1 cut(s) | 357 |
| AoxI | GGCC | 1 cut(s) | 759 |
| ApoI | RAATTY | 1 cut(s) | 298 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 235, 267 |
| AspLEI | GCGC | 4 cut(s) | 457, 495, 523, 604 |
| AsuHPI | GGTGA | 2 cut(s) | 232, 602 |
| AsuII | TTCGAA | 2 cut(s) | 26, 204 |
| AsuNHI | GCTAGC | 1 cut(s) | 107 |
| AvaI | CYCGRG | 1 cut(s) | 357 |
| BaeGI | GKGCMC | 1 cut(s) | 786 |
| BanII | GRGCYC | 1 cut(s) | 15 |
| BbrPI | CACGTG | 1 cut(s) | 81 |
| Bbv12I | GWGCWC | 2 cut(s) | 15, 425 |
| BccI | CCATC | 4 cut(s) | 208, 260, 547, 633 |
| BciT130I | CCWGG | 1 cut(s) | 435 |
| BcoDI | GTCTC | 1 cut(s) | 347 |
| BfaI | CTAG | 3 cut(s) | 108, 558, 767 |
| BfmI | CTRYAG | 7 cut(s) | 461, 531, 659, 696, 722, 732, 749 |
| BfrI | CTTAAG | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 3 cut(s) | 454, 486, 524 |
| Bme1390I | CCNGG | 1 cut(s) | 435 |
| BmeT110I | CYCGRG | 1 cut(s) | 357 |
| BmrFI | CCNGG | 1 cut(s) | 435 |
| BmtI | GCTAGC | 1 cut(s) | 111 |
| BpmI | CTGGAG | 1 cut(s) | 467 |
| Bpu14I | TTCGAA | 2 cut(s) | 26, 204 |
| BsaAI | YACGTR | 1 cut(s) | 81 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 409, 439 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 70, 195, 414, 434, 768 |
| Bse1I | ACTGG | 3 cut(s) | 95, 134, 487 |
| BseBI | CCWGG | 1 cut(s) | 435 |
| BseGI | GGATG | 2 cut(s) | 590, 644 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 70, 195, 414, 434, 768 |
| BseNI | ACTGG | 3 cut(s) | 95, 134, 487 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BseSI | GKGCMC | 1 cut(s) | 786 |
| BseYI | CCCAGC | 3 cut(s) | 514, 611, 643 |
| BsgI | GTGCAG | 3 cut(s) | 569, 650, 729 |
| Bsh1236I | CGCG | 2 cut(s) | 457, 604 |
| BshFI | GGCC | 1 cut(s) | 761 |
| BsiHKAI | GWGCWC | 2 cut(s) | 15, 425 |
| BsiHKCI | CYCGRG | 1 cut(s) | 357 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 70, 195, 414, 434, 768 |
| BsmAI | GTCTC | 1 cut(s) | 347 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| BsnI | GGCC | 1 cut(s) | 761 |
| BsoBI | CYCGRG | 1 cut(s) | 357 |
| Bsp119I | TTCGAA | 2 cut(s) | 26, 204 |
| Bsp1286I | GDGCHC | 3 cut(s) | 15, 425, 786 |
| Bsp143I | GATC | 1 cut(s) | 387 |
| BspANI | GGCC | 1 cut(s) | 761 |
| BspFNI | CGCG | 2 cut(s) | 457, 604 |
| BspMAI | CTGCAG | 7 cut(s) | 465, 535, 663, 700, 726, 736, 753 |
| BspMI | ACCTGC | 3 cut(s) | 454, 486, 524 |
| BspOI | GCTAGC | 1 cut(s) | 111 |
| BspT104I | TTCGAA | 2 cut(s) | 26, 204 |
| BspTI | CTTAAG | 1 cut(s) | 341 |
| BsrBI | CCGCTC | 1 cut(s) | 119 |
| BsrI | ACTGG | 3 cut(s) | 95, 134, 487 |
| BssMI | GATC | 1 cut(s) | 387 |
| Bst2UI | CCWGG | 1 cut(s) | 435 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| Bst6I | CTCTTC | 1 cut(s) | 661 |
| BstAFI | CTTAAG | 1 cut(s) | 341 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 539, 572, 658, 695 |
| BstBAI | YACGTR | 1 cut(s) | 81 |
| BstBI | TTCGAA | 2 cut(s) | 26, 204 |
| BstF5I | GGATG | 2 cut(s) | 590, 644 |
| BstFNI | CGCG | 2 cut(s) | 457, 604 |
| BstHHI | GCGC | 4 cut(s) | 457, 495, 523, 604 |
| BstKTI | GATC | 1 cut(s) | 390 |
| BstMAI | GTCTC | 1 cut(s) | 347 |
| BstMBI | GATC | 1 cut(s) | 387 |
| BstNI | CCWGG | 1 cut(s) | 435 |
| BstNSI | RCATGY | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 433 |
| BstSFI | CTRYAG | 7 cut(s) | 461, 531, 659, 696, 722, 732, 749 |
| BstSLI | GKGCMC | 1 cut(s) | 786 |
| BstUI | CGCG | 2 cut(s) | 457, 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 441 |
| BsuRI | GGCC | 1 cut(s) | 761 |
| BtsCI | GGATG | 2 cut(s) | 590, 644 |
| BtsI | GCAGTG | 2 cut(s) | 552, 638 |
| BtsIMutI | CAGTG | 5 cut(s) | 88, 127, 552, 638, 784 |
| BveI | ACCTGC | 3 cut(s) | 454, 486, 524 |
| CaiI | CAGNNNCTG | 2 cut(s) | 658, 695 |
| CfoI | GCGC | 4 cut(s) | 457, 495, 523, 604 |
| Csp6I | GTAC | 1 cut(s) | 368 |
| CviAII | CATG | 3 cut(s) | 233, 363, 567 |
| CviQI | GTAC | 1 cut(s) | 368 |
| DpnI | GATC | 1 cut(s) | 389 |
| DpnII | GATC | 1 cut(s) | 387 |
| Eam1104I | CTCTTC | 1 cut(s) | 661 |
| EarI | CTCTTC | 1 cut(s) | 661 |
| EciI | GGCGGA | 2 cut(s) | 103, 493 |
| Ecl136II | GAGCTC | 1 cut(s) | 13 |
| Eco24I | GRGCYC | 1 cut(s) | 15 |
| Eco53kI | GAGCTC | 1 cut(s) | 13 |
| Eco72I | CACGTG | 1 cut(s) | 81 |
| Eco88I | CYCGRG | 1 cut(s) | 357 |
| EcoICRI | GAGCTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 1 cut(s) | 433 |
| EcoT38I | GRGCYC | 1 cut(s) | 15 |
| FaeI | CATG | 3 cut(s) | 236, 366, 570 |
| FaiI | YATR | 4 cut(s) | 234, 286, 364, 568 |
| FatI | CATG | 3 cut(s) | 232, 362, 566 |
| FauI | CCCGC | 3 cut(s) | 494, 612, 671 |
| FokI | GGATG | 2 cut(s) | 597, 651 |
| FriOI | GRGCYC | 1 cut(s) | 15 |
| FspBI | CTAG | 3 cut(s) | 108, 558, 767 |
| FspI | TGCGCA | 1 cut(s) | 522 |
| GlaI | GCGC | 4 cut(s) | 456, 494, 522, 603 |
| GsaI | CCCAGC | 3 cut(s) | 518, 615, 647 |
| GsuI | CTGGAG | 1 cut(s) | 467 |
| HaeIII | GGCC | 1 cut(s) | 761 |
| HhaI | GCGC | 4 cut(s) | 457, 495, 523, 604 |
| Hin1II | CATG | 3 cut(s) | 236, 366, 570 |
| Hin6I | GCGC | 4 cut(s) | 455, 493, 521, 602 |
| HinP1I | GCGC | 4 cut(s) | 455, 493, 521, 602 |
| HincII | GTYRAC | 2 cut(s) | 243, 349 |
| HindII | GTYRAC | 2 cut(s) | 243, 349 |
| HinfI | GANTC | 3 cut(s) | 50, 162, 355 |
| HpaI | GTTAAC | 1 cut(s) | 349 |
| HphI | GGTGA | 2 cut(s) | 232, 602 |
| Hpy166II | GTNNAC | 4 cut(s) | 243, 349, 368, 417 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 49, 55 |
| Hpy188III | TCNNGA | 4 cut(s) | 40, 290, 319, 398 |
| Hpy8I | GTNNAC | 4 cut(s) | 243, 349, 368, 417 |
| HpyAV | CCTTC | 1 cut(s) | 33 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 2 cut(s) | 80, 135 |
| HpySE526I | ACGT | 2 cut(s) | 80, 135 |
| Hsp92II | CATG | 3 cut(s) | 236, 366, 570 |
| HspAI | GCGC | 4 cut(s) | 455, 493, 521, 602 |
| KspAI | GTTAAC | 1 cut(s) | 349 |
| Kzo9I | GATC | 1 cut(s) | 387 |
| LmnI | GCTCC | 4 cut(s) | 10, 18, 116, 448 |
| MaeI | CTAG | 3 cut(s) | 108, 558, 767 |
| MaeII | ACGT | 2 cut(s) | 80, 135 |
| MaeIII | GTNAC | 1 cut(s) | 125 |
| MalI | GATC | 1 cut(s) | 389 |
| MbiI | CCGCTC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 387 |
| MboII | GAAGA | 2 cut(s) | 271, 678 |
| MfeI | CAATTG | 1 cut(s) | 180 |
| MhlI | GDGCHC | 3 cut(s) | 15, 425, 786 |
| MluCI | AATT | 6 cut(s) | 175, 180, 298, 311, 327, 429 |
| MlyI | GAGTC | 2 cut(s) | 44, 349 |
| MmeI | TCCRAC | 2 cut(s) | 72, 78 |
| MnlI | CCTC | 9 cut(s) | 55, 148, 192, 575, 586, 695, 710, 731, 751 |
| MseI | TTAA | 3 cut(s) | 237, 342, 348 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspA1I | CMGCKG | 1 cut(s) | 66 |
| MspCI | CTTAAG | 1 cut(s) | 341 |
| MspR9I | CCNGG | 1 cut(s) | 435 |
| MunI | CAATTG | 1 cut(s) | 180 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 435 |
| MvnI | CGCG | 2 cut(s) | 457, 604 |
| NdeII | GATC | 1 cut(s) | 387 |
| NheI | GCTAGC | 1 cut(s) | 107 |
| NlaIII | CATG | 3 cut(s) | 236, 366, 570 |
| NmeAIII | GCCGAG | 1 cut(s) | 787 |
| NmuCI | GTSAC | 1 cut(s) | 125 |
| NsbI | TGCGCA | 1 cut(s) | 522 |
| NspI | RCATGY | 1 cut(s) | 366 |
| NspV | TTCGAA | 2 cut(s) | 26, 204 |
| PaeR7I | CTCGAG | 1 cut(s) | 357 |
| PaqCI | CACCTGC | 1 cut(s) | 486 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 77 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PfeI | GAWTC | 1 cut(s) | 162 |
| PleI | GAGTC | 2 cut(s) | 44, 349 |
| PmaCI | CACGTG | 1 cut(s) | 81 |
| PmlI | CACGTG | 1 cut(s) | 81 |
| PpsI | GAGTC | 2 cut(s) | 44, 349 |
| Ppu21I | YACGTR | 1 cut(s) | 81 |
| Psp124BI | GAGCTC | 1 cut(s) | 15 |
| Psp6I | CCWGG | 1 cut(s) | 433 |
| PspCI | CACGTG | 1 cut(s) | 81 |
| PspFI | CCCAGC | 3 cut(s) | 514, 611, 643 |
| PspGI | CCWGG | 1 cut(s) | 433 |
| PspXI | VCTCGAGB | 1 cut(s) | 357 |
| PstI | CTGCAG | 7 cut(s) | 465, 535, 663, 700, 726, 736, 753 |
| PstNI | CAGNNNCTG | 2 cut(s) | 658, 695 |
| RsaI | GTAC | 1 cut(s) | 369 |
| RsaNI | GTAC | 1 cut(s) | 368 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SacI | GAGCTC | 1 cut(s) | 15 |
| SaqAI | TTAA | 3 cut(s) | 237, 342, 348 |
| Sau3AI | GATC | 1 cut(s) | 387 |
| SchI | GAGTC | 2 cut(s) | 44, 349 |
| ScrFI | CCNGG | 1 cut(s) | 435 |
| SduI | GDGCHC | 3 cut(s) | 15, 425, 786 |
| SfcI | CTRYAG | 7 cut(s) | 461, 531, 659, 696, 722, 732, 749 |
| Sfr274I | CTCGAG | 1 cut(s) | 357 |
| SfuI | TTCGAA | 2 cut(s) | 26, 204 |
| SlaI | CTCGAG | 1 cut(s) | 357 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SmlI | CTYRAG | 2 cut(s) | 341, 357 |
| SmoI | CTYRAG | 2 cut(s) | 341, 357 |
| Sse9I | AATT | 6 cut(s) | 175, 180, 298, 311, 327, 429 |
| SspMI | CTAG | 3 cut(s) | 108, 558, 767 |
| SstI | GAGCTC | 1 cut(s) | 15 |
| StyD4I | CCNGG | 1 cut(s) | 433 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaiI | ACGT | 2 cut(s) | 83, 138 |
| TaqI | TCGA | 6 cut(s) | 26, 41, 204, 358, 390, 397 |
| TasI | AATT | 6 cut(s) | 175, 180, 298, 311, 327, 429 |
| TatI | WGTACW | 1 cut(s) | 367 |
| TauI | GCSGC | 5 cut(s) | 66, 87, 119, 460, 545 |
| TfiI | GAWTC | 1 cut(s) | 162 |
| Tru1I | TTAA | 3 cut(s) | 237, 342, 348 |
| Tru9I | TTAA | 3 cut(s) | 237, 342, 348 |
| TscAI | CASTG | 4 cut(s) | 95, 134, 552, 638 |
| TseFI | GTSAC | 1 cut(s) | 125 |
| Tsp45I | GTSAC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 2 cut(s) | 17, 311 |
| TspRI | CASTG | 4 cut(s) | 95, 134, 552, 638 |
| Vha464I | CTTAAG | 1 cut(s) | 341 |
| XapI | RAATTY | 1 cut(s) | 298 |
| XceI | RCATGY | 1 cut(s) | 366 |
| XhoI | CTCGAG | 1 cut(s) | 357 |
| XspI | CTAG | 3 cut(s) | 108, 558, 767 |