Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 261 |
| AcuI | CTGAAG | 1 cut(s) | 57 |
| AgsI | TTSAA | 2 cut(s) | 115, 242 |
| AluBI | AGCT | 3 cut(s) | 305, 341, 373 |
| AluI | AGCT | 3 cut(s) | 305, 341, 373 |
| Alw21I | GWGCWC | 1 cut(s) | 434 |
| Alw26I | GTCTC | 3 cut(s) | 50, 161, 186 |
| AoxI | GGCC | 2 cut(s) | 217, 261 |
| BalI | TGGCCA | 1 cut(s) | 263 |
| Bbv12I | GWGCWC | 1 cut(s) | 434 |
| BcoDI | GTCTC | 3 cut(s) | 50, 161, 186 |
| BmsI | GCATC | 2 cut(s) | 126, 460 |
| Bpu10I | CCTNAGC | 1 cut(s) | 502 |
| BpuEI | CTTGAG | 1 cut(s) | 321 |
| BsaBI | GATNNNNATC | 1 cut(s) | 33 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 392, 422 |
| Bse1I | ACTGG | 1 cut(s) | 153 |
| Bse8I | GATNNNNATC | 1 cut(s) | 33 |
| BseGI | GGATG | 3 cut(s) | 52, 141, 475 |
| BseJI | GATNNNNATC | 1 cut(s) | 33 |
| BseMII | CTCAG | 1 cut(s) | 120 |
| BseNI | ACTGG | 1 cut(s) | 153 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseYI | CCCAGC | 1 cut(s) | 305 |
| BshFI | GGCC | 2 cut(s) | 219, 263 |
| BsiHKAI | GWGCWC | 1 cut(s) | 434 |
| BsiSI | CCGG | 1 cut(s) | 220 |
| BsmAI | GTCTC | 3 cut(s) | 50, 161, 186 |
| BsnI | GGCC | 2 cut(s) | 219, 263 |
| Bsp1286I | GDGCHC | 1 cut(s) | 434 |
| BspANI | GGCC | 2 cut(s) | 219, 263 |
| BspCNI | CTCAG | 1 cut(s) | 121 |
| BspHI | TCATGA | 1 cut(s) | 184 |
| BsrI | ACTGG | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 1 cut(s) | 81 |
| BstDEI | CTNAG | 2 cut(s) | 129, 502 |
| BstF5I | GGATG | 3 cut(s) | 52, 141, 475 |
| BstMAI | GTCTC | 3 cut(s) | 50, 161, 186 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 160 |
| BsuRI | GGCC | 2 cut(s) | 219, 263 |
| BtsCI | GGATG | 3 cut(s) | 52, 141, 475 |
| CciI | TCATGA | 1 cut(s) | 184 |
| CviAII | CATG | 2 cut(s) | 185, 465 |
| CviJI | RGCY | 8 cut(s) | 71, 202, 219, 263, 305, 341, 373, 501 |
| CviKI_1 | RGCY | 8 cut(s) | 71, 202, 219, 263, 305, 341, 373, 501 |
| DdeI | CTNAG | 2 cut(s) | 129, 502 |
| EaeI | YGGCCR | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 1 cut(s) | 57 |
| FaeI | CATG | 2 cut(s) | 188, 468 |
| FatI | CATG | 2 cut(s) | 184, 464 |
| FokI | GGATG | 3 cut(s) | 59, 148, 482 |
| GsaI | CCCAGC | 1 cut(s) | 309 |
| HaeIII | GGCC | 2 cut(s) | 219, 263 |
| HapII | CCGG | 1 cut(s) | 220 |
| Hin1II | CATG | 2 cut(s) | 188, 468 |
| HincII | GTYRAC | 1 cut(s) | 88 |
| HindII | GTYRAC | 1 cut(s) | 88 |
| HindIII | AAGCTT | 1 cut(s) | 339 |
| HinfI | GANTC | 2 cut(s) | 40, 179 |
| HpaI | GTTAAC | 1 cut(s) | 88 |
| HpaII | CCGG | 1 cut(s) | 220 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 3 cut(s) | 39, 130, 512 |
| Hpy188III | TCNNGA | 4 cut(s) | 44, 75, 185, 437 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyAV | CCTTC | 3 cut(s) | 248, 304, 488 |
| HpyCH4III | ACNGT | 1 cut(s) | 81 |
| HpyCH4V | TGCA | 2 cut(s) | 139, 413 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 502 |
| Hsp92II | CATG | 2 cut(s) | 188, 468 |
| KspAI | GTTAAC | 1 cut(s) | 88 |
| LmnI | GCTCC | 3 cut(s) | 302, 400, 429 |
| LpnPI | CCDG | 6 cut(s) | 29, 60, 125, 166, 233, 291 |
| LweI | GCATC | 2 cut(s) | 126, 460 |
| MaeIII | GTNAC | 1 cut(s) | 479 |
| MboII | GAAGA | 2 cut(s) | 38, 503 |
| MhlI | GDGCHC | 1 cut(s) | 434 |
| MlsI | TGGCCA | 1 cut(s) | 263 |
| MluCI | AATT | 4 cut(s) | 256, 277, 290, 321 |
| MluNI | TGGCCA | 1 cut(s) | 263 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 1 cut(s) | 230 |
| MnlI | CCTC | 6 cut(s) | 28, 124, 136, 139, 385, 491 |
| Mox20I | TGGCCA | 1 cut(s) | 263 |
| MscI | TGGCCA | 1 cut(s) | 263 |
| MseI | TTAA | 1 cut(s) | 87 |
| Msp20I | TGGCCA | 1 cut(s) | 263 |
| MspI | CCGG | 1 cut(s) | 220 |
| NlaIII | CATG | 2 cut(s) | 188, 468 |
| PagI | TCATGA | 1 cut(s) | 184 |
| PfeI | GAWTC | 1 cut(s) | 40 |
| PleI | GAGTC | 1 cut(s) | 187 |
| PpsI | GAGTC | 1 cut(s) | 187 |
| PspFI | CCCAGC | 1 cut(s) | 305 |
| SaqAI | TTAA | 1 cut(s) | 87 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SduI | GDGCHC | 1 cut(s) | 434 |
| SetI | ASST | 7 cut(s) | 150, 212, 307, 343, 353, 375, 419 |
| SfaNI | GCATC | 2 cut(s) | 126, 460 |
| SmlI | CTYRAG | 1 cut(s) | 336 |
| SmoI | CTYRAG | 1 cut(s) | 336 |
| Sse9I | AATT | 4 cut(s) | 256, 277, 290, 321 |
| TaaI | ACNGT | 1 cut(s) | 81 |
| TasI | AATT | 4 cut(s) | 256, 277, 290, 321 |
| TfiI | GAWTC | 1 cut(s) | 40 |
| Tru1I | TTAA | 1 cut(s) | 87 |
| Tru9I | TTAA | 1 cut(s) | 87 |