zinc-binding in reverse transcriptase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 541 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 656, 844 |
| AclWI | GGATC | 1 cut(s) | 924 |
| AcsI | RAATTY | 1 cut(s) | 1085 |
| AcuI | CTGAAG | 2 cut(s) | 388, 597 |
| AcyI | GRCGYC | 1 cut(s) | 643 |
| AfaI | GTAC | 4 cut(s) | 67, 189, 867, 1117 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 244, 656, 844, 980 |
| AflII | CTTAAG | 1 cut(s) | 253 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AgsI | TTSAA | 5 cut(s) | 383, 412, 673, 989, 1051 |
| AjnI | CCWGG | 3 cut(s) | 44, 190, 907 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1052, 1084 |
| AluBI | AGCT | 8 cut(s) | 18, 52, 182, 511, 755, 928, 1019, 1031 |
| AluI | AGCT | 8 cut(s) | 18, 52, 182, 511, 755, 928, 1019, 1031 |
| Alw21I | GWGCWC | 1 cut(s) | 301 |
| Alw44I | GTGCAC | 1 cut(s) | 297 |
| AlwI | GGATC | 1 cut(s) | 924 |
| AoxI | GGCC | 5 cut(s) | 484, 632, 684, 846, 894 |
| ApaLI | GTGCAC | 1 cut(s) | 297 |
| ApeKI | GCWGC | 1 cut(s) | 664 |
| ApoI | RAATTY | 1 cut(s) | 1085 |
| AseI | ATTAAT | 1 cut(s) | 833 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1089 |
| AspS9I | GGNCC | 3 cut(s) | 145, 484, 684 |
| AsuHPI | GGTGA | 3 cut(s) | 34, 287, 914 |
| AsuII | TTCGAA | 1 cut(s) | 730 |
| AsuNHI | GCTAGC | 1 cut(s) | 1031 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BaeGI | GKGCMC | 1 cut(s) | 301 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 564, 596 |
| BauI | CACGAG | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 1 cut(s) | 301 |
| BbvI | GCAGC | 1 cut(s) | 651 |
| BccI | CCATC | 5 cut(s) | 165, 643, 674, 704, 1109 |
| BciT130I | CCWGG | 3 cut(s) | 46, 192, 909 |
| BclI | TGATCA | 1 cut(s) | 601 |
| BfaI | CTAG | 3 cut(s) | 528, 768, 1032 |
| BfmI | CTRYAG | 1 cut(s) | 997 |
| BfrI | CTTAAG | 1 cut(s) | 253 |
| BfuAI | ACCTGC | 1 cut(s) | 541 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 640 |
| BisI | GCNGC | 1 cut(s) | 665 |
| BlsI | GCNGC | 1 cut(s) | 666 |
| Bme1390I | CCNGG | 3 cut(s) | 46, 192, 909 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 3 cut(s) | 145, 484, 684 |
| BmiI | GGNNCC | 4 cut(s) | 146, 147, 485, 685 |
| BmrFI | CCNGG | 3 cut(s) | 46, 192, 909 |
| BmrI | ACTGGG | 1 cut(s) | 150 |
| BmsI | GCATC | 4 cut(s) | 137, 462, 942, 1087 |
| BmtI | GCTAGC | 1 cut(s) | 1035 |
| BmuI | ACTGGG | 1 cut(s) | 150 |
| BoxI | GACNNNNGTC | 1 cut(s) | 857 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 419, 451, 905, 937 |
| BpmI | CTGGAG | 1 cut(s) | 1065 |
| Bpu14I | TTCGAA | 1 cut(s) | 730 |
| BsaHI | GRCGYC | 1 cut(s) | 643 |
| BsaJI | CCNNGG | 2 cut(s) | 908, 1036 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1063, 1093 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 244, 656, 844, 980 |
| Bse1I | ACTGG | 2 cut(s) | 95, 145 |
| BseBI | CCWGG | 3 cut(s) | 46, 192, 909 |
| BseDI | CCNNGG | 2 cut(s) | 908, 1036 |
| BseGI | GGATG | 2 cut(s) | 128, 1102 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 244, 656, 844, 980 |
| BseMII | CTCAG | 1 cut(s) | 792 |
| BseNI | ACTGG | 2 cut(s) | 95, 145 |
| BseSI | GKGCMC | 1 cut(s) | 301 |
| BseXI | GCAGC | 1 cut(s) | 651 |
| BseYI | CCCAGC | 2 cut(s) | 755, 924 |
| BsgI | GTGCAG | 1 cut(s) | 650 |
| BshFI | GGCC | 5 cut(s) | 486, 634, 686, 848, 896 |
| BsiHKAI | GWGCWC | 1 cut(s) | 301 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 244, 656, 844, 980 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| BsmI | GAATGC | 2 cut(s) | 341, 666 |
| BsnI | GGCC | 5 cut(s) | 486, 634, 686, 848, 896 |
| Bsp119I | TTCGAA | 1 cut(s) | 730 |
| Bsp1286I | GDGCHC | 1 cut(s) | 301 |
| Bsp143I | GATC | 3 cut(s) | 34, 601, 916 |
| Bsp19I | CCATGG | 1 cut(s) | 1036 |
| BspANI | GGCC | 5 cut(s) | 486, 634, 686, 848, 896 |
| BspCNI | CTCAG | 1 cut(s) | 793 |
| BspLI | GGNNCC | 4 cut(s) | 146, 147, 485, 685 |
| BspMI | ACCTGC | 1 cut(s) | 541 |
| BspOI | GCTAGC | 1 cut(s) | 1035 |
| BspPI | GGATC | 1 cut(s) | 924 |
| BspT104I | TTCGAA | 1 cut(s) | 730 |
| BspTI | CTTAAG | 1 cut(s) | 253 |
| BsrI | ACTGG | 2 cut(s) | 95, 145 |
| BssECI | CCNNGG | 2 cut(s) | 908, 1036 |
| BssMI | GATC | 3 cut(s) | 34, 601, 916 |
| BssNI | GRCGYC | 1 cut(s) | 643 |
| BssSI | CACGAG | 1 cut(s) | 99 |
| BssT1I | CCWWGG | 1 cut(s) | 1036 |
| Bst2BI | CACGAG | 1 cut(s) | 99 |
| Bst2UI | CCWGG | 3 cut(s) | 46, 192, 909 |
| Bst4CI | ACNGT | 3 cut(s) | 174, 388, 979 |
| Bst6I | CTCTTC | 1 cut(s) | 567 |
| BstACI | GRCGYC | 1 cut(s) | 643 |
| BstAFI | CTTAAG | 1 cut(s) | 253 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 970 |
| BstBI | TTCGAA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 7 cut(s) | 126, 219, 432, 589, 632, 798, 1033 |
| BstDEI | CTNAG | 3 cut(s) | 801, 869, 891 |
| BstDSI | CCRYGG | 1 cut(s) | 1036 |
| BstF5I | GGATG | 2 cut(s) | 128, 1102 |
| BstKTI | GATC | 3 cut(s) | 37, 604, 919 |
| BstMBI | GATC | 3 cut(s) | 34, 601, 916 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 548, 640, 761, 797, 893, 970 |
| BstNI | CCWGG | 3 cut(s) | 46, 192, 909 |
| BstNSI | RCATGY | 2 cut(s) | 326, 800 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 857 |
| BstSCI | CCNGG | 3 cut(s) | 44, 190, 907 |
| BstSFI | CTRYAG | 1 cut(s) | 997 |
| BstSLI | GKGCMC | 1 cut(s) | 301 |
| BstV1I | GCAGC | 1 cut(s) | 651 |
| BstX2I | RGATCY | 1 cut(s) | 916 |
| BstYI | RGATCY | 1 cut(s) | 916 |
| BsuRI | GGCC | 5 cut(s) | 486, 634, 686, 848, 896 |
| BtgI | CCRYGG | 1 cut(s) | 1036 |
| BtsCI | GGATG | 2 cut(s) | 128, 1102 |
| BtsIMutI | CAGTG | 3 cut(s) | 170, 464, 621 |
| BveI | ACCTGC | 1 cut(s) | 541 |
| Cac8I | GCNNGC | 7 cut(s) | 126, 219, 432, 589, 632, 798, 1033 |
| Cfr13I | GGNCC | 3 cut(s) | 145, 484, 684 |
| CseI | GACGC | 1 cut(s) | 632 |
| Csp6I | GTAC | 4 cut(s) | 66, 188, 866, 1116 |
| CviAII | CATG | 6 cut(s) | 323, 779, 797, 821, 965, 1037 |
| CviQI | GTAC | 4 cut(s) | 66, 188, 866, 1116 |
| DdeI | CTNAG | 3 cut(s) | 801, 869, 891 |
| DpnI | GATC | 3 cut(s) | 36, 603, 918 |
| DpnII | GATC | 3 cut(s) | 34, 601, 916 |
| Eam1104I | CTCTTC | 1 cut(s) | 567 |
| EarI | CTCTTC | 1 cut(s) | 567 |
| Eco130I | CCWWGG | 1 cut(s) | 1036 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 2 cut(s) | 388, 597 |
| EcoO109I | RGGNCCY | 3 cut(s) | 145, 484, 684 |
| EcoRII | CCWGG | 3 cut(s) | 44, 190, 907 |
| EcoT14I | CCWWGG | 1 cut(s) | 1036 |
| ErhI | CCWWGG | 1 cut(s) | 1036 |
| FaeI | CATG | 6 cut(s) | 326, 782, 800, 824, 968, 1040 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| FatI | CATG | 6 cut(s) | 322, 778, 796, 820, 964, 1036 |
| FauNDI | CATATG | 1 cut(s) | 206 |
| FbaI | TGATCA | 1 cut(s) | 601 |
| Fnu4HI | GCNGC | 1 cut(s) | 665 |
| FokI | GGATG | 2 cut(s) | 115, 1109 |
| Fsp4HI | GCNGC | 1 cut(s) | 665 |
| FspBI | CTAG | 3 cut(s) | 528, 768, 1032 |
| GluI | GCNGC | 1 cut(s) | 665 |
| GsaI | CCCAGC | 2 cut(s) | 759, 928 |
| GsuI | CTGGAG | 1 cut(s) | 1065 |
| HaeIII | GGCC | 5 cut(s) | 486, 634, 686, 848, 896 |
| HgaI | GACGC | 1 cut(s) | 632 |
| Hin1I | GRCGYC | 1 cut(s) | 643 |
| Hin1II | CATG | 6 cut(s) | 326, 782, 800, 824, 968, 1040 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 2 cut(s) | 311, 1126 |
| HphI | GGTGA | 3 cut(s) | 34, 287, 914 |
| Hpy166II | GTNNAC | 3 cut(s) | 299, 905, 1071 |
| Hpy188III | TCNNGA | 7 cut(s) | 101, 514, 528, 768, 1058, 1082, 1094 |
| Hpy8I | GTNNAC | 3 cut(s) | 299, 905, 1071 |
| HpyAV | CCTTC | 4 cut(s) | 242, 412, 618, 705 |
| HpyCH4III | ACNGT | 3 cut(s) | 174, 388, 979 |
| HpyCH4IV | ACGT | 2 cut(s) | 68, 858 |
| HpyCH4V | TGCA | 6 cut(s) | 86, 299, 542, 667, 796, 964 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 548, 640, 761, 797, 893, 970 |
| HpyF3I | CTNAG | 3 cut(s) | 801, 869, 891 |
| HpySE526I | ACGT | 2 cut(s) | 68, 858 |
| Hsp92I | GRCGYC | 1 cut(s) | 643 |
| Hsp92II | CATG | 6 cut(s) | 326, 782, 800, 824, 968, 1040 |
| KflI | GGGWCCC | 1 cut(s) | 145 |
| Ksp22I | TGATCA | 1 cut(s) | 601 |
| Kzo9I | GATC | 3 cut(s) | 34, 601, 916 |
| LmnI | GCTCC | 3 cut(s) | 240, 427, 1084 |
| Lsp1109I | GCAGC | 1 cut(s) | 651 |
| LweI | GCATC | 4 cut(s) | 137, 462, 942, 1087 |
| MaeI | CTAG | 3 cut(s) | 528, 768, 1032 |
| MaeII | ACGT | 2 cut(s) | 68, 858 |
| MaeIII | GTNAC | 2 cut(s) | 266, 391 |
| MalI | GATC | 3 cut(s) | 36, 603, 918 |
| MboI | GATC | 3 cut(s) | 34, 601, 916 |
| MboII | GAAGA | 3 cut(s) | 584, 603, 1073 |
| MfeI | CAATTG | 2 cut(s) | 543, 1074 |
| MflI | RGATCY | 1 cut(s) | 916 |
| MhlI | GDGCHC | 1 cut(s) | 301 |
| MluCI | AATT | 6 cut(s) | 543, 703, 813, 830, 1074, 1085 |
| MlyI | GAGTC | 1 cut(s) | 320 |
| MmeI | TCCRAC | 1 cut(s) | 405 |
| MnlI | CCTC | 7 cut(s) | 142, 378, 409, 445, 657, 907, 937 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1089 |
| MseI | TTAA | 4 cut(s) | 254, 816, 833, 951 |
| MspCI | CTTAAG | 1 cut(s) | 253 |
| MspR9I | CCNGG | 3 cut(s) | 46, 192, 909 |
| MunI | CAATTG | 2 cut(s) | 543, 1074 |
| Mva1269I | GAATGC | 2 cut(s) | 341, 666 |
| MvaI | CCWGG | 3 cut(s) | 46, 192, 909 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 548, 640, 761, 797, 893, 970 |
| NcoI | CCATGG | 1 cut(s) | 1036 |
| NdeI | CATATG | 1 cut(s) | 206 |
| NdeII | GATC | 3 cut(s) | 34, 601, 916 |
| NheI | GCTAGC | 1 cut(s) | 1031 |
| NlaIII | CATG | 6 cut(s) | 326, 782, 800, 824, 968, 1040 |
| NlaIV | GGNNCC | 4 cut(s) | 146, 147, 485, 685 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| NspI | RCATGY | 2 cut(s) | 326, 800 |
| NspV | TTCGAA | 1 cut(s) | 730 |
| PaeI | GCATGC | 1 cut(s) | 800 |
| PciI | ACATGT | 1 cut(s) | 322 |
| PctI | GAATGC | 2 cut(s) | 341, 666 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1089 |
| PfeI | GAWTC | 1 cut(s) | 1126 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 656, 844 |
| PkrI | GCNGC | 1 cut(s) | 666 |
| PleI | GAGTC | 1 cut(s) | 319 |
| PpsI | GAGTC | 1 cut(s) | 319 |
| PpuMI | RGGWCCY | 1 cut(s) | 145 |
| PscI | ACATGT | 1 cut(s) | 322 |
| PshAI | GACNNNNGTC | 1 cut(s) | 857 |
| PshBI | ATTAAT | 1 cut(s) | 833 |
| Psp5II | RGGWCCY | 1 cut(s) | 145 |
| Psp6I | CCWGG | 3 cut(s) | 44, 190, 907 |
| PspFI | CCCAGC | 2 cut(s) | 755, 924 |
| PspGI | CCWGG | 3 cut(s) | 44, 190, 907 |
| PspN4I | GGNNCC | 4 cut(s) | 146, 147, 485, 685 |
| PspPI | GGNCC | 3 cut(s) | 145, 484, 684 |
| PspPPI | RGGWCCY | 1 cut(s) | 145 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 560, 592 |
| PsuI | RGATCY | 1 cut(s) | 916 |
| RsaI | GTAC | 4 cut(s) | 67, 189, 867, 1117 |
| RsaNI | GTAC | 4 cut(s) | 66, 188, 866, 1116 |
| SaqAI | TTAA | 4 cut(s) | 254, 816, 833, 951 |
| SatI | GCNGC | 1 cut(s) | 665 |
| Sau3AI | GATC | 3 cut(s) | 34, 601, 916 |
| Sau96I | GGNCC | 3 cut(s) | 145, 484, 684 |
| SchI | GAGTC | 1 cut(s) | 320 |
| ScrFI | CCNGG | 3 cut(s) | 46, 192, 909 |
| SduI | GDGCHC | 1 cut(s) | 301 |
| SfaNI | GCATC | 4 cut(s) | 137, 462, 942, 1087 |
| SfcI | CTRYAG | 1 cut(s) | 997 |
| SfuI | TTCGAA | 1 cut(s) | 730 |
| SinI | GGWCC | 1 cut(s) | 145 |
| SmlI | CTYRAG | 1 cut(s) | 253 |
| SmoI | CTYRAG | 1 cut(s) | 253 |
| SphI | GCATGC | 1 cut(s) | 800 |
| Sse9I | AATT | 6 cut(s) | 543, 703, 813, 830, 1074, 1085 |
| SspMI | CTAG | 3 cut(s) | 528, 768, 1032 |
| StyD4I | CCNGG | 3 cut(s) | 44, 190, 907 |
| StyI | CCWWGG | 1 cut(s) | 1036 |
| TaaI | ACNGT | 3 cut(s) | 174, 388, 979 |
| TaiI | ACGT | 2 cut(s) | 71, 861 |
| TaqI | TCGA | 1 cut(s) | 730 |
| TasI | AATT | 6 cut(s) | 543, 703, 813, 830, 1074, 1085 |
| TatI | WGTACW | 2 cut(s) | 865, 1115 |
| TfiI | GAWTC | 1 cut(s) | 1126 |
| Tru1I | TTAA | 4 cut(s) | 254, 816, 833, 951 |
| Tru9I | TTAA | 4 cut(s) | 254, 816, 833, 951 |
| TscAI | CASTG | 3 cut(s) | 177, 471, 621 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| TseI | GCWGC | 1 cut(s) | 664 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspDTI | ATGAA | 4 cut(s) | 568, 585, 638, 750 |
| TspRI | CASTG | 3 cut(s) | 177, 471, 621 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 656, 844 |
| Vha464I | CTTAAG | 1 cut(s) | 253 |
| VneI | GTGCAC | 1 cut(s) | 297 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| VspI | ATTAAT | 1 cut(s) | 833 |
| XapI | RAATTY | 1 cut(s) | 1085 |
| XbaI | TCTAGA | 2 cut(s) | 527, 767 |
| XceI | RCATGY | 2 cut(s) | 326, 800 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1089 |
| XspI | CTAG | 3 cut(s) | 528, 768, 1032 |