Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 192, 301 |
| AccB1I | GGYRCC | 2 cut(s) | 192, 301 |
| AccBSI | CCGCTC | 1 cut(s) | 189 |
| AccI | GTMKAC | 2 cut(s) | 112, 236 |
| AciI | CCGC | 3 cut(s) | 189, 263, 305 |
| AfaI | GTAC | 4 cut(s) | 176, 194, 247, 303 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 315 |
| Alw26I | GTCTC | 1 cut(s) | 121 |
| Asp718I | GGTACC | 2 cut(s) | 192, 301 |
| AspLEI | GCGC | 2 cut(s) | 333, 349 |
| AspS9I | GGNCC | 2 cut(s) | 28, 260 |
| AvaII | GGWCC | 2 cut(s) | 28, 260 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 285, 318 |
| BanI | GGYRCC | 2 cut(s) | 192, 301 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 176, 208 |
| BbsI | GAAGAC | 2 cut(s) | 104, 299 |
| BccI | CCATC | 1 cut(s) | 43 |
| BcoDI | GTCTC | 1 cut(s) | 121 |
| BfaI | CTAG | 2 cut(s) | 222, 297 |
| BfoI | RGCGCY | 1 cut(s) | 334 |
| Bme18I | GGWCC | 2 cut(s) | 28, 260 |
| BmgT120I | GGNCC | 2 cut(s) | 28, 260 |
| BmiI | GGNNCC | 2 cut(s) | 194, 303 |
| BpiI | GAAGAC | 2 cut(s) | 104, 299 |
| BpmI | CTGGAG | 1 cut(s) | 37 |
| Bsa29I | ATCGAT | 1 cut(s) | 36 |
| BsaAI | YACGTR | 1 cut(s) | 358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 315 |
| Bse1I | ACTGG | 1 cut(s) | 20 |
| BseCI | ATCGAT | 1 cut(s) | 36 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BseMII | CTCAG | 2 cut(s) | 110, 194 |
| BseNI | ACTGG | 1 cut(s) | 20 |
| BseRI | GAGGAG | 1 cut(s) | 59 |
| BseYI | CCCAGC | 1 cut(s) | 265 |
| Bsh1285I | CGRYCG | 1 cut(s) | 142 |
| BshNI | GGYRCC | 2 cut(s) | 192, 301 |
| BshVI | ATCGAT | 1 cut(s) | 36 |
| BsiEI | CGRYCG | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BsmAI | GTCTC | 1 cut(s) | 121 |
| Bsp143I | GATC | 2 cut(s) | 33, 139 |
| BspACI | CCGC | 3 cut(s) | 189, 263, 305 |
| BspCNI | CTCAG | 2 cut(s) | 111, 195 |
| BspDI | ATCGAT | 1 cut(s) | 36 |
| BspLI | GGNNCC | 2 cut(s) | 194, 303 |
| BspQI | GCTCTTC | 1 cut(s) | 179 |
| BspT107I | GGYRCC | 2 cut(s) | 192, 301 |
| BsrBI | CCGCTC | 1 cut(s) | 189 |
| BsrI | ACTGG | 1 cut(s) | 20 |
| BssMI | GATC | 2 cut(s) | 33, 139 |
| BssNAI | GTATAC | 1 cut(s) | 113 |
| Bst1107I | GTATAC | 1 cut(s) | 113 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 250 |
| Bst6I | CTCTTC | 2 cut(s) | 69, 179 |
| BstBAI | YACGTR | 1 cut(s) | 358 |
| BstC8I | GCNNGC | 1 cut(s) | 335 |
| BstDEI | CTNAG | 2 cut(s) | 119, 203 |
| BstH2I | RGCGCY | 1 cut(s) | 334 |
| BstHHI | GCGC | 2 cut(s) | 333, 349 |
| BstKTI | GATC | 2 cut(s) | 36, 142 |
| BstMAI | GTCTC | 1 cut(s) | 121 |
| BstMBI | GATC | 2 cut(s) | 33, 139 |
| BstMCI | CGRYCG | 1 cut(s) | 142 |
| BstV2I | GAAGAC | 2 cut(s) | 104, 299 |
| BstZ17I | GTATAC | 1 cut(s) | 113 |
| Bsu15I | ATCGAT | 1 cut(s) | 36 |
| BsuTUI | ATCGAT | 1 cut(s) | 36 |
| BtsIMutI | CAGTG | 2 cut(s) | 116, 200 |
| Cac8I | GCNNGC | 1 cut(s) | 335 |
| CfoI | GCGC | 2 cut(s) | 333, 349 |
| Cfr13I | GGNCC | 2 cut(s) | 28, 260 |
| ClaI | ATCGAT | 1 cut(s) | 36 |
| CseI | GACGC | 1 cut(s) | 222 |
| Csp6I | GTAC | 4 cut(s) | 175, 193, 246, 302 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 105, 140 |
| CviAII | CATG | 1 cut(s) | 197 |
| CviJI | RGCY | 1 cut(s) | 221 |
| CviKI_1 | RGCY | 1 cut(s) | 221 |
| CviQI | GTAC | 4 cut(s) | 175, 193, 246, 302 |
| DdeI | CTNAG | 2 cut(s) | 119, 203 |
| DpnI | GATC | 2 cut(s) | 35, 141 |
| DpnII | GATC | 2 cut(s) | 33, 139 |
| Eam1104I | CTCTTC | 2 cut(s) | 69, 179 |
| EarI | CTCTTC | 2 cut(s) | 69, 179 |
| Eco47I | GGWCC | 2 cut(s) | 28, 260 |
| EcoO109I | RGGNCCY | 1 cut(s) | 28 |
| FaeI | CATG | 1 cut(s) | 200 |
| FaiI | YATR | 7 cut(s) | 113, 151, 198, 217, 289, 326, 361 |
| FatI | CATG | 1 cut(s) | 196 |
| FauI | CCCGC | 1 cut(s) | 182 |
| FblI | GTMKAC | 2 cut(s) | 112, 236 |
| FspBI | CTAG | 2 cut(s) | 222, 297 |
| GlaI | GCGC | 2 cut(s) | 332, 348 |
| GsaI | CCCAGC | 1 cut(s) | 269 |
| GsuI | CTGGAG | 1 cut(s) | 37 |
| HaeII | RGCGCY | 1 cut(s) | 334 |
| HgaI | GACGC | 1 cut(s) | 222 |
| HhaI | GCGC | 2 cut(s) | 333, 349 |
| Hin1II | CATG | 1 cut(s) | 200 |
| Hin6I | GCGC | 2 cut(s) | 331, 347 |
| HinP1I | GCGC | 2 cut(s) | 331, 347 |
| Hpy166II | GTNNAC | 4 cut(s) | 81, 113, 237, 260 |
| Hpy8I | GTNNAC | 4 cut(s) | 81, 113, 237, 260 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 250 |
| HpyCH4IV | ACGT | 1 cut(s) | 357 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 200 |
| HpyF3I | CTNAG | 2 cut(s) | 119, 203 |
| HpySE526I | ACGT | 1 cut(s) | 357 |
| Hsp92II | CATG | 1 cut(s) | 200 |
| HspAI | GCGC | 2 cut(s) | 331, 347 |
| KpnI | GGTACC | 2 cut(s) | 196, 305 |
| Kzo9I | GATC | 2 cut(s) | 33, 139 |
| LguI | GCTCTTC | 1 cut(s) | 179 |
| LpnPI | CCDG | 3 cut(s) | 44, 80, 251 |
| MaeI | CTAG | 2 cut(s) | 222, 297 |
| MaeII | ACGT | 1 cut(s) | 357 |
| MalI | GATC | 2 cut(s) | 35, 141 |
| MbiI | CCGCTC | 1 cut(s) | 189 |
| MboI | GATC | 2 cut(s) | 33, 139 |
| MboII | GAAGA | 4 cut(s) | 86, 109, 196, 304 |
| MluCI | AATT | 1 cut(s) | 252 |
| MnlI | CCTC | 6 cut(s) | 19, 37, 162, 198, 335, 363 |
| MspA1I | CMGCKG | 1 cut(s) | 265 |
| NdeII | GATC | 2 cut(s) | 33, 139 |
| NlaIII | CATG | 1 cut(s) | 200 |
| NlaIV | GGNNCC | 2 cut(s) | 194, 303 |
| PciSI | GCTCTTC | 1 cut(s) | 179 |
| Ple19I | CGATCG | 1 cut(s) | 142 |
| Ppu21I | YACGTR | 1 cut(s) | 358 |
| PpuMI | RGGWCCY | 1 cut(s) | 28 |
| Psp5II | RGGWCCY | 1 cut(s) | 28 |
| PspFI | CCCAGC | 1 cut(s) | 265 |
| PspN4I | GGNNCC | 2 cut(s) | 194, 303 |
| PspPI | GGNCC | 2 cut(s) | 28, 260 |
| PspPPI | RGGWCCY | 1 cut(s) | 28 |
| PvuI | CGATCG | 1 cut(s) | 142 |
| RsaI | GTAC | 4 cut(s) | 176, 194, 247, 303 |
| RsaNI | GTAC | 4 cut(s) | 175, 193, 246, 302 |
| SapI | GCTCTTC | 1 cut(s) | 179 |
| Sau3AI | GATC | 2 cut(s) | 33, 139 |
| Sau96I | GGNCC | 2 cut(s) | 28, 260 |
| SetI | ASST | 7 cut(s) | 33, 69, 173, 209, 346, 355, 360 |
| SinI | GGWCC | 2 cut(s) | 28, 260 |
| Sse9I | AATT | 1 cut(s) | 252 |
| SsiI | CCGC | 3 cut(s) | 189, 263, 305 |
| SspI | AATATT | 1 cut(s) | 229 |
| SspMI | CTAG | 2 cut(s) | 222, 297 |
| TaaI | ACNGT | 2 cut(s) | 85, 250 |
| TaiI | ACGT | 1 cut(s) | 360 |
| TaqI | TCGA | 3 cut(s) | 36, 242, 340 |
| TasI | AATT | 1 cut(s) | 252 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TscAI | CASTG | 2 cut(s) | 123, 207 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| TspGWI | ACGGA | 1 cut(s) | 23 |
| TspRI | CASTG | 2 cut(s) | 123, 207 |
| VpaK11BI | GGWCC | 2 cut(s) | 28, 260 |
| XmiI | GTMKAC | 2 cut(s) | 112, 236 |
| XspI | CTAG | 2 cut(s) | 222, 297 |