ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 371 |
| AccB1I | GGYRCC | 1 cut(s) | 48 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 62 |
| AccII | CGCG | 1 cut(s) | 138 |
| AclWI | GGATC | 1 cut(s) | 283 |
| AcoI | YGGCCR | 1 cut(s) | 220 |
| AcuI | CTGAAG | 1 cut(s) | 333 |
| AfaI | GTAC | 2 cut(s) | 135, 306 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 62 |
| AflIII | ACRYGT | 1 cut(s) | 395 |
| AhlI | ACTAGT | 1 cut(s) | 58 |
| AjnI | CCWGG | 1 cut(s) | 33 |
| AluBI | AGCT | 5 cut(s) | 8, 26, 311, 334, 338 |
| AluI | AGCT | 5 cut(s) | 8, 26, 311, 334, 338 |
| Alw26I | GTCTC | 1 cut(s) | 198 |
| AlwI | GGATC | 1 cut(s) | 283 |
| AoxI | GGCC | 1 cut(s) | 220 |
| AsuNHI | GCTAGC | 2 cut(s) | 26, 334 |
| BaeGI | GKGCMC | 1 cut(s) | 53 |
| BanI | GGYRCC | 1 cut(s) | 48 |
| BccI | CCATC | 1 cut(s) | 80 |
| BceAI | ACGGC | 1 cut(s) | 207 |
| BciT130I | CCWGG | 1 cut(s) | 35 |
| BciVI | GTATCC | 1 cut(s) | 316 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcoDI | GTCTC | 1 cut(s) | 198 |
| BcuI | ACTAGT | 1 cut(s) | 58 |
| BfaI | CTAG | 5 cut(s) | 27, 59, 239, 335, 339 |
| BfmI | CTRYAG | 1 cut(s) | 172 |
| BfuAI | ACCTGC | 1 cut(s) | 371 |
| BfuI | GTATCC | 1 cut(s) | 316 |
| Bme1390I | CCNGG | 1 cut(s) | 35 |
| BmiI | GGNNCC | 1 cut(s) | 50 |
| BmrFI | CCNGG | 1 cut(s) | 35 |
| BmtI | GCTAGC | 2 cut(s) | 30, 338 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 311, 343 |
| BpmI | CTGGAG | 1 cut(s) | 183 |
| Bpu10I | CCTNAGC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 1 cut(s) | 44 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 117, 147 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 62 |
| Bse1I | ACTGG | 1 cut(s) | 223 |
| BseBI | CCWGG | 1 cut(s) | 35 |
| BseDI | CCNNGG | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseMII | CTCAG | 1 cut(s) | 342 |
| BseNI | ACTGG | 1 cut(s) | 223 |
| BseSI | GKGCMC | 1 cut(s) | 53 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| BshFI | GGCC | 1 cut(s) | 222 |
| BshNI | GGYRCC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BsmAI | GTCTC | 1 cut(s) | 198 |
| BsnI | GGCC | 1 cut(s) | 222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 53 |
| Bsp143I | GATC | 2 cut(s) | 181, 275 |
| BspANI | GGCC | 1 cut(s) | 222 |
| BspCNI | CTCAG | 1 cut(s) | 341 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspLI | GGNNCC | 1 cut(s) | 50 |
| BspMI | ACCTGC | 1 cut(s) | 371 |
| BspOI | GCTAGC | 2 cut(s) | 30, 338 |
| BspPI | GGATC | 1 cut(s) | 283 |
| BspT107I | GGYRCC | 1 cut(s) | 48 |
| BsrI | ACTGG | 1 cut(s) | 223 |
| BssECI | CCNNGG | 1 cut(s) | 44 |
| BssMI | GATC | 2 cut(s) | 181, 275 |
| BssT1I | CCWWGG | 1 cut(s) | 44 |
| Bst2UI | CCWGG | 1 cut(s) | 35 |
| BstC8I | GCNNGC | 4 cut(s) | 6, 28, 169, 336 |
| BstDEI | CTNAG | 2 cut(s) | 71, 328 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstKTI | GATC | 2 cut(s) | 184, 278 |
| BstMAI | GTCTC | 1 cut(s) | 198 |
| BstMBI | GATC | 2 cut(s) | 181, 275 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 295 |
| BstNI | CCWGG | 1 cut(s) | 35 |
| BstNSI | RCATGY | 3 cut(s) | 171, 234, 399 |
| BstSCI | CCNGG | 1 cut(s) | 33 |
| BstSFI | CTRYAG | 1 cut(s) | 172 |
| BstSLI | GKGCMC | 1 cut(s) | 53 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BsuI | GTATCC | 1 cut(s) | 316 |
| BsuRI | GGCC | 1 cut(s) | 222 |
| BtgZI | GCGATG | 1 cut(s) | 153 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| BtsIMutI | CAGTG | 1 cut(s) | 216 |
| BveI | ACCTGC | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 4 cut(s) | 6, 28, 169, 336 |
| CsiI | ACCWGGT | 1 cut(s) | 33 |
| Csp6I | GTAC | 2 cut(s) | 134, 305 |
| CviAII | CATG | 4 cut(s) | 168, 190, 231, 396 |
| CviQI | GTAC | 2 cut(s) | 134, 305 |
| DdeI | CTNAG | 2 cut(s) | 71, 328 |
| DpnI | GATC | 2 cut(s) | 183, 277 |
| DpnII | GATC | 2 cut(s) | 181, 275 |
| EaeI | YGGCCR | 1 cut(s) | 220 |
| Eco130I | CCWWGG | 1 cut(s) | 44 |
| Eco57I | CTGAAG | 1 cut(s) | 333 |
| EcoRII | CCWGG | 1 cut(s) | 33 |
| EcoT14I | CCWWGG | 1 cut(s) | 44 |
| ErhI | CCWWGG | 1 cut(s) | 44 |
| FaeI | CATG | 4 cut(s) | 171, 193, 234, 399 |
| FatI | CATG | 4 cut(s) | 167, 189, 230, 395 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| FokI | GGATG | 1 cut(s) | 98 |
| FspBI | CTAG | 5 cut(s) | 27, 59, 239, 335, 339 |
| GsuI | CTGGAG | 1 cut(s) | 183 |
| HaeIII | GGCC | 1 cut(s) | 222 |
| Hin1II | CATG | 4 cut(s) | 171, 193, 234, 399 |
| HincII | GTYRAC | 1 cut(s) | 349 |
| HindII | GTYRAC | 1 cut(s) | 349 |
| HinfI | GANTC | 1 cut(s) | 342 |
| Hpy166II | GTNNAC | 2 cut(s) | 236, 349 |
| Hpy188I | TCNGA | 3 cut(s) | 275, 280, 331 |
| Hpy8I | GTNNAC | 2 cut(s) | 236, 349 |
| HpyAV | CCTTC | 3 cut(s) | 223, 308, 382 |
| HpyCH4V | TGCA | 2 cut(s) | 230, 298 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 295 |
| HpyF3I | CTNAG | 2 cut(s) | 71, 328 |
| Hsp92II | CATG | 4 cut(s) | 171, 193, 234, 399 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 2 cut(s) | 181, 275 |
| LmnI | GCTCC | 1 cut(s) | 164 |
| LpnPI | CCDG | 6 cut(s) | 20, 47, 132, 147, 204, 366 |
| MabI | ACCWGGT | 1 cut(s) | 33 |
| MaeI | CTAG | 5 cut(s) | 27, 59, 239, 335, 339 |
| MalI | GATC | 2 cut(s) | 183, 277 |
| MboI | GATC | 2 cut(s) | 181, 275 |
| MhlI | GDGCHC | 1 cut(s) | 53 |
| MluCI | AATT | 2 cut(s) | 15, 198 |
| MlyI | GAGTC | 1 cut(s) | 351 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 5 cut(s) | 63, 107, 238, 313, 337 |
| MseI | TTAA | 2 cut(s) | 39, 257 |
| MslI | CAYNNNNRTG | 1 cut(s) | 114 |
| MspR9I | CCNGG | 1 cut(s) | 35 |
| MvaI | CCWGG | 1 cut(s) | 35 |
| MvnI | CGCG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 295 |
| NdeII | GATC | 2 cut(s) | 181, 275 |
| NheI | GCTAGC | 2 cut(s) | 26, 334 |
| NlaIII | CATG | 4 cut(s) | 171, 193, 234, 399 |
| NlaIV | GGNNCC | 1 cut(s) | 50 |
| NspI | RCATGY | 3 cut(s) | 171, 234, 399 |
| PaeI | GCATGC | 1 cut(s) | 171 |
| PciI | ACATGT | 1 cut(s) | 395 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 62 |
| PleI | GAGTC | 1 cut(s) | 350 |
| PpsI | GAGTC | 1 cut(s) | 350 |
| PscI | ACATGT | 1 cut(s) | 395 |
| Psp6I | CCWGG | 1 cut(s) | 33 |
| PspGI | CCWGG | 1 cut(s) | 33 |
| PspN4I | GGNNCC | 1 cut(s) | 50 |
| RsaI | GTAC | 2 cut(s) | 135, 306 |
| RsaNI | GTAC | 2 cut(s) | 134, 305 |
| RseI | CAYNNNNRTG | 1 cut(s) | 114 |
| SaqAI | TTAA | 2 cut(s) | 39, 257 |
| Sau3AI | GATC | 2 cut(s) | 181, 275 |
| SchI | GAGTC | 1 cut(s) | 351 |
| ScrFI | CCNGG | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 53 |
| SexAI | ACCWGGT | 1 cut(s) | 33 |
| SfcI | CTRYAG | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 114 |
| SpeI | ACTAGT | 1 cut(s) | 58 |
| SphI | GCATGC | 1 cut(s) | 171 |
| Sse9I | AATT | 2 cut(s) | 15, 198 |
| SspMI | CTAG | 5 cut(s) | 27, 59, 239, 335, 339 |
| StyD4I | CCNGG | 1 cut(s) | 33 |
| StyI | CCWWGG | 1 cut(s) | 44 |
| TasI | AATT | 2 cut(s) | 15, 198 |
| TatI | WGTACW | 1 cut(s) | 304 |
| Tru1I | TTAA | 2 cut(s) | 39, 257 |
| Tru9I | TTAA | 2 cut(s) | 39, 257 |
| TscAI | CASTG | 1 cut(s) | 223 |
| TspDTI | ATGAA | 2 cut(s) | 114, 156 |
| TspRI | CASTG | 1 cut(s) | 223 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 62 |
| XceI | RCATGY | 3 cut(s) | 171, 234, 399 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 63 |
| XspI | CTAG | 5 cut(s) | 27, 59, 239, 335, 339 |