Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 326 |
| AciI | CCGC | 1 cut(s) | 64 |
| AclWI | GGATC | 4 cut(s) | 120, 133, 399, 406 |
| AcuI | CTGAAG | 1 cut(s) | 403 |
| AfaI | GTAC | 1 cut(s) | 249 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 121, 244, 379 |
| AflIII | ACRYGT | 1 cut(s) | 78 |
| AgsI | TTSAA | 2 cut(s) | 9, 242 |
| AluBI | AGCT | 3 cut(s) | 20, 32, 426 |
| AluI | AGCT | 3 cut(s) | 20, 32, 426 |
| Alw21I | GWGCWC | 2 cut(s) | 279, 347 |
| Alw44I | GTGCAC | 1 cut(s) | 343 |
| AlwI | GGATC | 4 cut(s) | 120, 133, 399, 406 |
| ApaLI | GTGCAC | 1 cut(s) | 343 |
| ApeKI | GCWGC | 1 cut(s) | 322 |
| AspLEI | GCGC | 2 cut(s) | 4, 327 |
| AspS9I | GGNCC | 2 cut(s) | 135, 255 |
| AvaII | GGWCC | 2 cut(s) | 135, 255 |
| BaeGI | GKGCMC | 1 cut(s) | 347 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 239, 272 |
| BamHI | GGATCC | 1 cut(s) | 125 |
| Bbv12I | GWGCWC | 2 cut(s) | 279, 347 |
| BbvCI | CCTCAGC | 1 cut(s) | 110 |
| BbvI | GCAGC | 1 cut(s) | 309 |
| BccI | CCATC | 1 cut(s) | 192 |
| BfaI | CTAG | 1 cut(s) | 172 |
| BisI | GCNGC | 1 cut(s) | 323 |
| BlsI | GCNGC | 1 cut(s) | 324 |
| Bme18I | GGWCC | 2 cut(s) | 135, 255 |
| BmgT120I | GGNCC | 2 cut(s) | 135, 255 |
| BmiI | GGNNCC | 3 cut(s) | 127, 169, 256 |
| Bpu10I | CCTNAGC | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 1 cut(s) | 118 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 121, 244, 379 |
| BseDI | CCNNGG | 1 cut(s) | 118 |
| BseGI | GGATG | 1 cut(s) | 369 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 121, 244, 379 |
| BseMII | CTCAG | 1 cut(s) | 124 |
| BseSI | GKGCMC | 1 cut(s) | 347 |
| BseXI | GCAGC | 1 cut(s) | 309 |
| BsiHKAI | GWGCWC | 2 cut(s) | 279, 347 |
| BslFI | GGGAC | 1 cut(s) | 27 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 121, 244, 379 |
| BsmFI | GGGAC | 1 cut(s) | 27 |
| Bsp1286I | GDGCHC | 2 cut(s) | 279, 347 |
| Bsp143I | GATC | 4 cut(s) | 125, 225, 391, 398 |
| BspACI | CCGC | 1 cut(s) | 64 |
| BspCNI | CTCAG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 3 cut(s) | 127, 169, 256 |
| BspPI | GGATC | 4 cut(s) | 120, 133, 399, 406 |
| BssECI | CCNNGG | 1 cut(s) | 118 |
| BssMI | GATC | 4 cut(s) | 125, 225, 391, 398 |
| BstC8I | GCNNGC | 1 cut(s) | 22 |
| BstDEI | CTNAG | 2 cut(s) | 110, 440 |
| BstDSI | CCRYGG | 1 cut(s) | 118 |
| BstF5I | GGATG | 1 cut(s) | 369 |
| BstHHI | GCGC | 2 cut(s) | 4, 327 |
| BstKTI | GATC | 4 cut(s) | 128, 228, 394, 401 |
| BstMBI | GATC | 4 cut(s) | 125, 225, 391, 398 |
| BstNSI | RCATGY | 1 cut(s) | 82 |
| BstSLI | GKGCMC | 1 cut(s) | 347 |
| BstV1I | GCAGC | 1 cut(s) | 309 |
| BstX2I | RGATCY | 2 cut(s) | 125, 391 |
| BstYI | RGATCY | 2 cut(s) | 125, 391 |
| BtgI | CCRYGG | 1 cut(s) | 118 |
| BtsCI | GGATG | 1 cut(s) | 369 |
| BtsI | GCAGTG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 1 cut(s) | 270 |
| Cac8I | GCNNGC | 1 cut(s) | 22 |
| CfoI | GCGC | 2 cut(s) | 4, 327 |
| Cfr13I | GGNCC | 2 cut(s) | 135, 255 |
| Csp6I | GTAC | 1 cut(s) | 248 |
| CviAII | CATG | 5 cut(s) | 25, 79, 285, 330, 338 |
| CviJI | RGCY | 6 cut(s) | 20, 32, 46, 114, 150, 426 |
| CviKI_1 | RGCY | 6 cut(s) | 20, 32, 46, 114, 150, 426 |
| CviQI | GTAC | 1 cut(s) | 248 |
| DdeI | CTNAG | 2 cut(s) | 110, 440 |
| DpnI | GATC | 4 cut(s) | 127, 227, 393, 400 |
| DpnII | GATC | 4 cut(s) | 125, 225, 391, 398 |
| Eco47I | GGWCC | 2 cut(s) | 135, 255 |
| Eco57I | CTGAAG | 1 cut(s) | 403 |
| EcoO109I | RGGNCCY | 1 cut(s) | 255 |
| FaeI | CATG | 5 cut(s) | 28, 82, 288, 333, 341 |
| FaqI | GGGAC | 1 cut(s) | 27 |
| FatI | CATG | 5 cut(s) | 24, 78, 284, 329, 337 |
| FauNDI | CATATG | 1 cut(s) | 131 |
| Fnu4HI | GCNGC | 1 cut(s) | 323 |
| FokI | GGATG | 1 cut(s) | 356 |
| Fsp4HI | GCNGC | 1 cut(s) | 323 |
| FspBI | CTAG | 1 cut(s) | 172 |
| FspI | TGCGCA | 1 cut(s) | 326 |
| GlaI | GCGC | 2 cut(s) | 3, 326 |
| GluI | GCNGC | 1 cut(s) | 323 |
| HhaI | GCGC | 2 cut(s) | 4, 327 |
| Hin1II | CATG | 5 cut(s) | 28, 82, 288, 333, 341 |
| Hin6I | GCGC | 2 cut(s) | 2, 325 |
| HinP1I | GCGC | 2 cut(s) | 2, 325 |
| HincII | GTYRAC | 1 cut(s) | 206 |
| HindII | GTYRAC | 1 cut(s) | 206 |
| HindIII | AAGCTT | 2 cut(s) | 18, 424 |
| HinfI | GANTC | 1 cut(s) | 436 |
| Hpy166II | GTNNAC | 3 cut(s) | 206, 250, 345 |
| Hpy188I | TCNGA | 1 cut(s) | 422 |
| Hpy8I | GTNNAC | 3 cut(s) | 206, 250, 345 |
| HpyAV | CCTTC | 1 cut(s) | 427 |
| HpyCH4V | TGCA | 3 cut(s) | 24, 263, 345 |
| HpyF3I | CTNAG | 2 cut(s) | 110, 440 |
| Hsp92II | CATG | 5 cut(s) | 28, 82, 288, 333, 341 |
| HspAI | GCGC | 2 cut(s) | 2, 325 |
| Kzo9I | GATC | 4 cut(s) | 125, 225, 391, 398 |
| LpnPI | CCDG | 2 cut(s) | 150, 151 |
| Lsp1109I | GCAGC | 1 cut(s) | 309 |
| MaeI | CTAG | 1 cut(s) | 172 |
| MaeIII | GTNAC | 1 cut(s) | 81 |
| MalI | GATC | 4 cut(s) | 127, 227, 393, 400 |
| MboI | GATC | 4 cut(s) | 125, 225, 391, 398 |
| MflI | RGATCY | 2 cut(s) | 125, 391 |
| MhlI | GDGCHC | 2 cut(s) | 279, 347 |
| MluCI | AATT | 1 cut(s) | 98 |
| MlyI | GAGTC | 1 cut(s) | 430 |
| MmeI | TCCRAC | 2 cut(s) | 174, 360 |
| MnlI | CCTC | 4 cut(s) | 119, 125, 190, 358 |
| NdeI | CATATG | 1 cut(s) | 131 |
| NdeII | GATC | 4 cut(s) | 125, 225, 391, 398 |
| NlaIII | CATG | 5 cut(s) | 28, 82, 288, 333, 341 |
| NlaIV | GGNNCC | 3 cut(s) | 127, 169, 256 |
| NmeAIII | GCCGAG | 1 cut(s) | 73 |
| NmuCI | GTSAC | 1 cut(s) | 81 |
| NsbI | TGCGCA | 1 cut(s) | 326 |
| NspI | RCATGY | 1 cut(s) | 82 |
| PciI | ACATGT | 1 cut(s) | 78 |
| PkrI | GCNGC | 1 cut(s) | 324 |
| PleI | GAGTC | 1 cut(s) | 430 |
| PpsI | GAGTC | 1 cut(s) | 430 |
| PpuMI | RGGWCCY | 1 cut(s) | 255 |
| PscI | ACATGT | 1 cut(s) | 78 |
| Psp5II | RGGWCCY | 1 cut(s) | 255 |
| PspN4I | GGNNCC | 3 cut(s) | 127, 169, 256 |
| PspPI | GGNCC | 2 cut(s) | 135, 255 |
| PspPPI | RGGWCCY | 1 cut(s) | 255 |
| PsuI | RGATCY | 2 cut(s) | 125, 391 |
| RsaI | GTAC | 1 cut(s) | 249 |
| RsaNI | GTAC | 1 cut(s) | 248 |
| SatI | GCNGC | 1 cut(s) | 323 |
| Sau3AI | GATC | 4 cut(s) | 125, 225, 391, 398 |
| Sau96I | GGNCC | 2 cut(s) | 135, 255 |
| SchI | GAGTC | 1 cut(s) | 430 |
| SduI | GDGCHC | 2 cut(s) | 279, 347 |
| SetI | ASST | 6 cut(s) | 22, 34, 169, 350, 419, 428 |
| SinI | GGWCC | 2 cut(s) | 135, 255 |
| Sse9I | AATT | 1 cut(s) | 98 |
| SsiI | CCGC | 1 cut(s) | 64 |
| SspMI | CTAG | 1 cut(s) | 172 |
| TaqI | TCGA | 1 cut(s) | 34 |
| TaqII | GACCGA | 2 cut(s) | 44, 448 |
| TasI | AATT | 1 cut(s) | 98 |
| TscAI | CASTG | 1 cut(s) | 270 |
| TseFI | GTSAC | 1 cut(s) | 81 |
| TseI | GCWGC | 1 cut(s) | 322 |
| Tsp45I | GTSAC | 1 cut(s) | 81 |
| TspDTI | ATGAA | 2 cut(s) | 346, 358 |
| TspRI | CASTG | 1 cut(s) | 270 |
| VneI | GTGCAC | 1 cut(s) | 343 |
| VpaK11BI | GGWCC | 2 cut(s) | 135, 255 |
| XceI | RCATGY | 1 cut(s) | 82 |
| XspI | CTAG | 1 cut(s) | 172 |