Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 264 |
| AciI | CCGC | 5 cut(s) | 748, 768, 842, 1328, 1724 |
| AclWI | GGATC | 5 cut(s) | 982, 1380, 1496, 1509, 1628 |
| AcsI | RAATTY | 3 cut(s) | 270, 625, 852 |
| AfaI | GTAC | 5 cut(s) | 247, 562, 782, 1794, 1944 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 93, 157, 216, 334, 748, 1804 |
| AflIII | ACRYGT | 2 cut(s) | 49, 1462 |
| AgsI | TTSAA | 8 cut(s) | 121, 484, 1048, 1405, 1768, 1784, 1928, 2137 |
| AjiI | CACGTC | 1 cut(s) | 1465 |
| AjnI | CCWGG | 2 cut(s) | 474, 1388 |
| AleI | CACNNNNGTG | 1 cut(s) | 2082 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 85, 117 |
| Alw21I | GWGCWC | 2 cut(s) | 112, 502 |
| Alw26I | GTCTC | 5 cut(s) | 123, 455, 473, 743, 1955 |
| Alw44I | GTGCAC | 1 cut(s) | 108 |
| AlwI | GGATC | 5 cut(s) | 982, 1380, 1496, 1509, 1628 |
| Ama87I | CYCGRG | 1 cut(s) | 1416 |
| AoxI | GGCC | 1 cut(s) | 687 |
| ApaLI | GTGCAC | 1 cut(s) | 108 |
| ApeKI | GCWGC | 8 cut(s) | 7, 37, 97, 364, 367, 1641, 1738, 1991 |
| ApoI | RAATTY | 3 cut(s) | 270, 625, 852 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 315, 1299, 1932 |
| AspA2I | CCTAGG | 1 cut(s) | 1906 |
| AspS9I | GGNCC | 2 cut(s) | 337, 1963 |
| AsuC2I | CCSGG | 2 cut(s) | 1511, 1548 |
| AsuHPI | GGTGA | 6 cut(s) | 977, 1100, 1258, 1274, 1643, 1646 |
| AvaI | CYCGRG | 1 cut(s) | 1416 |
| AvaII | GGWCC | 2 cut(s) | 337, 1963 |
| AvrII | CCTAGG | 1 cut(s) | 1906 |
| BaeGI | GKGCMC | 2 cut(s) | 112, 1697 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 721, 754 |
| BamHI | GGATCC | 1 cut(s) | 1501 |
| BanII | GRGCYC | 2 cut(s) | 198, 502 |
| BauI | CACGAG | 1 cut(s) | 105 |
| BbsI | GAAGAC | 2 cut(s) | 1541, 1881 |
| Bbv12I | GWGCWC | 2 cut(s) | 112, 502 |
| BbvCI | CCTCAGC | 1 cut(s) | 1894 |
| BbvI | GCAGC | 7 cut(s) | 49, 109, 351, 354, 1628, 1750, 2003 |
| BccI | CCATC | 8 cut(s) | 36, 119, 159, 1086, 1259, 1342, 1622, 2038 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 86, 120 |
| BciT130I | CCWGG | 2 cut(s) | 476, 1390 |
| BciVI | GTATCC | 2 cut(s) | 1317, 1663 |
| BcnI | CCSGG | 2 cut(s) | 1511, 1548 |
| BcoDI | GTCTC | 5 cut(s) | 123, 455, 473, 743, 1955 |
| BfaI | CTAG | 9 cut(s) | 251, 428, 698, 1070, 1242, 1455, 1599, 1907, 2239 |
| BfmI | CTRYAG | 1 cut(s) | 1318 |
| BfuI | GTATCC | 2 cut(s) | 1317, 1663 |
| BisI | GCNGC | 8 cut(s) | 8, 38, 98, 365, 368, 1642, 1739, 1992 |
| BlnI | CCTAGG | 1 cut(s) | 1906 |
| BlsI | GCNGC | 8 cut(s) | 9, 39, 99, 366, 369, 1643, 1740, 1993 |
| Bme1390I | CCNGG | 4 cut(s) | 476, 1390, 1511, 1548 |
| Bme18I | GGWCC | 2 cut(s) | 337, 1963 |
| BmeT110I | CYCGRG | 1 cut(s) | 1416 |
| BmgBI | CACGTC | 1 cut(s) | 1465 |
| BmgT120I | GGNCC | 2 cut(s) | 337, 1963 |
| BmiI | GGNNCC | 1 cut(s) | 1503 |
| BmrFI | CCNGG | 4 cut(s) | 476, 1390, 1511, 1548 |
| BmrI | ACTGGG | 1 cut(s) | 1456 |
| BmsI | GCATC | 7 cut(s) | 170, 195, 421, 427, 541, 1162, 1767 |
| BmuI | ACTGGG | 1 cut(s) | 1456 |
| BpiI | GAAGAC | 2 cut(s) | 1541, 1881 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 573, 605 |
| BpmI | CTGGAG | 2 cut(s) | 1411, 1733 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1894 |
| BpuEI | CTTGAG | 1 cut(s) | 853 |
| BpuMI | CCSGG | 2 cut(s) | 1511, 1548 |
| BsaAI | YACGTR | 1 cut(s) | 1946 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1632, 1832 |
| BsaI | GGTCTC | 3 cut(s) | 473, 743, 1955 |
| BsaJI | CCNNGG | 4 cut(s) | 475, 1547, 1906, 2171 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 85, 115, 1246, 1276 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 93, 157, 216, 334, 748, 1804 |
| Bse118I | RCCGGY | 1 cut(s) | 209 |
| Bse1I | ACTGG | 5 cut(s) | 173, 469, 809, 821, 1451 |
| Bse3DI | GCAATG | 2 cut(s) | 743, 1920 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1632, 1832 |
| BseBI | CCWGG | 2 cut(s) | 476, 1390 |
| BseDI | CCNNGG | 4 cut(s) | 475, 1547, 1906, 2171 |
| BseGI | GGATG | 9 cut(s) | 130, 385, 412, 471, 1097, 1177, 1782, 1813, 2155 |
| BseJI | GATNNNNATC | 2 cut(s) | 1632, 1832 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 93, 157, 216, 334, 748, 1804 |
| BseMI | GCAATG | 2 cut(s) | 743, 1920 |
| BseMII | CTCAG | 5 cut(s) | 464, 963, 1488, 1908, 2088 |
| BseNI | ACTGG | 5 cut(s) | 173, 469, 809, 821, 1451 |
| BseRI | GAGGAG | 2 cut(s) | 686, 1222 |
| BseSI | GKGCMC | 2 cut(s) | 112, 1697 |
| BseXI | GCAGC | 7 cut(s) | 49, 109, 351, 354, 1628, 1750, 2003 |
| BshFI | GGCC | 1 cut(s) | 689 |
| BsiHKAI | GWGCWC | 2 cut(s) | 112, 502 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1416 |
| BsiSI | CCGG | 4 cut(s) | 210, 1510, 1547, 2147 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 93, 157, 216, 334, 748, 1804 |
| BsmAI | GTCTC | 5 cut(s) | 123, 455, 473, 743, 1955 |
| BsnI | GGCC | 1 cut(s) | 689 |
| Bso31I | GGTCTC | 3 cut(s) | 473, 743, 1955 |
| BsoBI | CYCGRG | 1 cut(s) | 1416 |
| Bsp1286I | GDGCHC | 4 cut(s) | 112, 198, 502, 1697 |
| Bsp143I | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| BspACI | CCGC | 5 cut(s) | 748, 768, 842, 1328, 1724 |
| BspANI | GGCC | 1 cut(s) | 689 |
| BspCNI | CTCAG | 5 cut(s) | 463, 964, 1489, 1907, 2089 |
| BspLI | GGNNCC | 1 cut(s) | 1503 |
| BspPI | GGATC | 5 cut(s) | 982, 1380, 1496, 1509, 1628 |
| BspQI | GCTCTTC | 1 cut(s) | 27 |
| BspTNI | GGTCTC | 3 cut(s) | 473, 743, 1955 |
| BsrDI | GCAATG | 2 cut(s) | 743, 1920 |
| BsrFI | RCCGGY | 1 cut(s) | 209 |
| BsrI | ACTGG | 5 cut(s) | 173, 469, 809, 821, 1451 |
| BssAI | RCCGGY | 1 cut(s) | 209 |
| BssECI | CCNNGG | 4 cut(s) | 475, 1547, 1906, 2171 |
| BssMI | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| BssSI | CACGAG | 1 cut(s) | 105 |
| BssT1I | CCWWGG | 1 cut(s) | 1906 |
| Bst2BI | CACGAG | 1 cut(s) | 105 |
| Bst2UI | CCWGG | 2 cut(s) | 476, 1390 |
| Bst4CI | ACNGT | 2 cut(s) | 1880, 2198 |
| Bst6I | CTCTTC | 6 cut(s) | 27, 701, 992, 1125, 1907, 1923 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1997 |
| BstBAI | YACGTR | 1 cut(s) | 1946 |
| BstC8I | GCNNGC | 5 cut(s) | 1080, 1222, 1575, 1646, 1890 |
| BstDEI | CTNAG | 5 cut(s) | 450, 972, 1497, 1894, 2097 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 91 |
| BstF5I | GGATG | 9 cut(s) | 130, 385, 412, 471, 1097, 1177, 1782, 1813, 2155 |
| BstKTI | GATC | 5 cut(s) | 298, 990, 1388, 1504, 1636 |
| BstMAI | GTCTC | 5 cut(s) | 123, 455, 473, 743, 1955 |
| BstMBI | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 16, 43, 226, 1079, 1084, 1997, 2152 |
| BstNI | CCWGG | 2 cut(s) | 476, 1390 |
| BstNSI | RCATGY | 6 cut(s) | 53, 1426, 1581, 2018, 2036, 2146 |
| BstSCI | CCNGG | 4 cut(s) | 474, 1388, 1509, 1546 |
| BstSFI | CTRYAG | 1 cut(s) | 1318 |
| BstSLI | GKGCMC | 2 cut(s) | 112, 1697 |
| BstV1I | GCAGC | 7 cut(s) | 49, 109, 351, 354, 1628, 1750, 2003 |
| BstV2I | GAAGAC | 2 cut(s) | 1541, 1881 |
| BstX2I | RGATCY | 2 cut(s) | 987, 1501 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 816 |
| BstYI | RGATCY | 2 cut(s) | 987, 1501 |
| BsuI | GTATCC | 2 cut(s) | 1317, 1663 |
| BsuRI | GGCC | 1 cut(s) | 689 |
| BtgZI | GCGATG | 1 cut(s) | 55 |
| BtrI | CACGTC | 1 cut(s) | 1465 |
| BtsCI | GGATG | 9 cut(s) | 130, 385, 412, 471, 1097, 1177, 1782, 1813, 2155 |
| BtsIMutI | CAGTG | 2 cut(s) | 816, 1494 |
| Cac8I | GCNNGC | 5 cut(s) | 1080, 1222, 1575, 1646, 1890 |
| Cfr10I | RCCGGY | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 2 cut(s) | 337, 1963 |
| Csp6I | GTAC | 5 cut(s) | 246, 561, 781, 1793, 1943 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2016, 2051 |
| CviQI | GTAC | 5 cut(s) | 246, 561, 781, 1793, 1943 |
| DdeI | CTNAG | 5 cut(s) | 450, 972, 1497, 1894, 2097 |
| DpnI | GATC | 5 cut(s) | 297, 989, 1387, 1503, 1635 |
| DpnII | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| Eam1104I | CTCTTC | 6 cut(s) | 27, 701, 992, 1125, 1907, 1923 |
| EarI | CTCTTC | 6 cut(s) | 27, 701, 992, 1125, 1907, 1923 |
| EciI | GGCGGA | 1 cut(s) | 1713 |
| Ecl136II | GAGCTC | 1 cut(s) | 500 |
| Eco130I | CCWWGG | 1 cut(s) | 1906 |
| Eco24I | GRGCYC | 2 cut(s) | 198, 502 |
| Eco31I | GGTCTC | 3 cut(s) | 473, 743, 1955 |
| Eco32I | GATATC | 1 cut(s) | 2122 |
| Eco47I | GGWCC | 2 cut(s) | 337, 1963 |
| Eco53kI | GAGCTC | 1 cut(s) | 500 |
| Eco88I | CYCGRG | 1 cut(s) | 1416 |
| EcoICRI | GAGCTC | 1 cut(s) | 500 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 91 |
| EcoO109I | RGGNCCY | 1 cut(s) | 337 |
| EcoRII | CCWGG | 2 cut(s) | 474, 1388 |
| EcoRV | GATATC | 1 cut(s) | 2122 |
| EcoT14I | CCWWGG | 1 cut(s) | 1906 |
| EcoT22I | ATGCAT | 1 cut(s) | 414 |
| EcoT38I | GRGCYC | 2 cut(s) | 198, 502 |
| ErhI | CCWWGG | 1 cut(s) | 1906 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 840, 872 |
| FauI | CCCGC | 2 cut(s) | 741, 835 |
| FauNDI | CATATG | 1 cut(s) | 1283 |
| Fnu4HI | GCNGC | 8 cut(s) | 8, 38, 98, 365, 368, 1642, 1739, 1992 |
| FokI | GGATG | 9 cut(s) | 137, 392, 399, 458, 1104, 1184, 1789, 1820, 2162 |
| FriOI | GRGCYC | 2 cut(s) | 198, 502 |
| Fsp4HI | GCNGC | 8 cut(s) | 8, 38, 98, 365, 368, 1642, 1739, 1992 |
| FspBI | CTAG | 9 cut(s) | 251, 428, 698, 1070, 1242, 1455, 1599, 1907, 2239 |
| GluI | GCNGC | 8 cut(s) | 8, 38, 98, 365, 368, 1642, 1739, 1992 |
| GsuI | CTGGAG | 2 cut(s) | 1411, 1733 |
| HaeIII | GGCC | 1 cut(s) | 689 |
| HapII | CCGG | 4 cut(s) | 210, 1510, 1547, 2147 |
| HindIII | AAGCTT | 1 cut(s) | 1820 |
| HinfI | GANTC | 6 cut(s) | 974, 1300, 1585, 1852, 1970, 2219 |
| HpaII | CCGG | 4 cut(s) | 210, 1510, 1547, 2147 |
| HphI | GGTGA | 6 cut(s) | 977, 1100, 1258, 1274, 1643, 1646 |
| Hpy166II | GTNNAC | 5 cut(s) | 110, 814, 1271, 1795, 1883 |
| Hpy188I | TCNGA | 8 cut(s) | 191, 310, 573, 1345, 1363, 1584, 1967, 2098 |
| Hpy188III | TCNNGA | 3 cut(s) | 832, 1531, 1750 |
| Hpy8I | GTNNAC | 5 cut(s) | 110, 814, 1271, 1795, 1883 |
| HpyAV | CCTTC | 6 cut(s) | 115, 278, 328, 1025, 1323, 1660 |
| HpyCH4III | ACNGT | 2 cut(s) | 1880, 2198 |
| HpyCH4IV | ACGT | 2 cut(s) | 1464, 1945 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 16, 43, 226, 1079, 1084, 1997, 2152 |
| HpyF3I | CTNAG | 5 cut(s) | 450, 972, 1497, 1894, 2097 |
| HpySE526I | ACGT | 2 cut(s) | 1464, 1945 |
| Kzo9I | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| LguI | GCTCTTC | 1 cut(s) | 27 |
| LmnI | GCTCC | 5 cut(s) | 497, 505, 673, 1209, 1603 |
| Lsp1109I | GCAGC | 7 cut(s) | 49, 109, 351, 354, 1628, 1750, 2003 |
| LweI | GCATC | 7 cut(s) | 170, 195, 421, 427, 541, 1162, 1767 |
| MaeI | CTAG | 9 cut(s) | 251, 428, 698, 1070, 1242, 1455, 1599, 1907, 2239 |
| MaeII | ACGT | 2 cut(s) | 1464, 1945 |
| MaeIII | GTNAC | 4 cut(s) | 62, 902, 1652, 2017 |
| MalI | GATC | 5 cut(s) | 297, 989, 1387, 1503, 1635 |
| MboI | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| MfeI | CAATTG | 1 cut(s) | 1306 |
| MflI | RGATCY | 2 cut(s) | 987, 1501 |
| MhlI | GDGCHC | 4 cut(s) | 112, 198, 502, 1697 |
| MlyI | GAGTC | 2 cut(s) | 983, 2228 |
| MmeI | TCCRAC | 2 cut(s) | 733, 2083 |
| Mph1103I | ATGCAT | 1 cut(s) | 414 |
| MroXI | GAANNNNTTC | 3 cut(s) | 315, 1299, 1932 |
| MseI | TTAA | 7 cut(s) | 240, 390, 861, 1236, 1278, 1434, 1481 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1563, 2082 |
| MspI | CCGG | 4 cut(s) | 210, 1510, 1547, 2147 |
| MspR9I | CCNGG | 4 cut(s) | 476, 1390, 1511, 1548 |
| MunI | CAATTG | 1 cut(s) | 1306 |
| MvaI | CCWGG | 2 cut(s) | 476, 1390 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 16, 43, 226, 1079, 1084, 1997, 2152 |
| NciI | CCSGG | 2 cut(s) | 1511, 1548 |
| NdeI | CATATG | 1 cut(s) | 1283 |
| NdeII | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| NlaIV | GGNNCC | 1 cut(s) | 1503 |
| NmuCI | GTSAC | 3 cut(s) | 62, 1652, 2017 |
| NsiI | ATGCAT | 1 cut(s) | 414 |
| NspI | RCATGY | 6 cut(s) | 53, 1426, 1581, 2018, 2036, 2146 |
| OliI | CACNNNNGTG | 1 cut(s) | 2082 |
| PaeR7I | CTCGAG | 1 cut(s) | 1416 |
| PciI | ACATGT | 1 cut(s) | 49 |
| PciSI | GCTCTTC | 1 cut(s) | 27 |
| PdmI | GAANNNNTTC | 3 cut(s) | 315, 1299, 1932 |
| PfeI | GAWTC | 4 cut(s) | 1300, 1585, 1852, 1970 |
| PfoI | TCCNGGA | 2 cut(s) | 1388, 1509 |
| PkrI | GCNGC | 8 cut(s) | 9, 39, 99, 366, 369, 1643, 1740, 1993 |
| PleI | GAGTC | 2 cut(s) | 982, 2227 |
| PpsI | GAGTC | 2 cut(s) | 982, 2227 |
| Ppu21I | YACGTR | 1 cut(s) | 1946 |
| PpuMI | RGGWCCY | 1 cut(s) | 337 |
| PscI | ACATGT | 1 cut(s) | 49 |
| PsiI | TTATAA | 1 cut(s) | 264 |
| Psp124BI | GAGCTC | 1 cut(s) | 502 |
| Psp5II | RGGWCCY | 1 cut(s) | 337 |
| Psp6I | CCWGG | 2 cut(s) | 474, 1388 |
| PspGI | CCWGG | 2 cut(s) | 474, 1388 |
| PspN4I | GGNNCC | 1 cut(s) | 1503 |
| PspPI | GGNCC | 2 cut(s) | 337, 1963 |
| PspPPI | RGGWCCY | 1 cut(s) | 337 |
| PspXI | VCTCGAGB | 1 cut(s) | 1416 |
| PsuI | RGATCY | 2 cut(s) | 987, 1501 |
| RsaI | GTAC | 5 cut(s) | 247, 562, 782, 1794, 1944 |
| RsaNI | GTAC | 5 cut(s) | 246, 561, 781, 1793, 1943 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1563, 2082 |
| SacI | GAGCTC | 1 cut(s) | 502 |
| SapI | GCTCTTC | 1 cut(s) | 27 |
| SaqAI | TTAA | 7 cut(s) | 240, 390, 861, 1236, 1278, 1434, 1481 |
| SatI | GCNGC | 8 cut(s) | 8, 38, 98, 365, 368, 1642, 1739, 1992 |
| Sau3AI | GATC | 5 cut(s) | 295, 987, 1385, 1501, 1633 |
| Sau96I | GGNCC | 2 cut(s) | 337, 1963 |
| SchI | GAGTC | 2 cut(s) | 983, 2228 |
| ScrFI | CCNGG | 4 cut(s) | 476, 1390, 1511, 1548 |
| SduI | GDGCHC | 4 cut(s) | 112, 198, 502, 1697 |
| SfaNI | GCATC | 7 cut(s) | 170, 195, 421, 427, 541, 1162, 1767 |
| SfcI | CTRYAG | 1 cut(s) | 1318 |
| Sfr274I | CTCGAG | 1 cut(s) | 1416 |
| SinI | GGWCC | 2 cut(s) | 337, 1963 |
| SlaI | CTCGAG | 1 cut(s) | 1416 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1563, 2082 |
| SmlI | CTYRAG | 2 cut(s) | 832, 1416 |
| SmoI | CTYRAG | 2 cut(s) | 832, 1416 |
| SsiI | CCGC | 5 cut(s) | 748, 768, 842, 1328, 1724 |
| SspI | AATATT | 1 cut(s) | 2209 |
| SspMI | CTAG | 9 cut(s) | 251, 428, 698, 1070, 1242, 1455, 1599, 1907, 2239 |
| SstI | GAGCTC | 1 cut(s) | 502 |
| StyD4I | CCNGG | 4 cut(s) | 474, 1388, 1509, 1546 |
| StyI | CCWWGG | 1 cut(s) | 1906 |
| TaaI | ACNGT | 2 cut(s) | 1880, 2198 |
| TaiI | ACGT | 2 cut(s) | 1467, 1948 |
| TaqI | TCGA | 4 cut(s) | 164, 1417, 1707, 1855 |
| TaqII | GACCGA | 1 cut(s) | 1398 |
| TatI | WGTACW | 2 cut(s) | 780, 1792 |
| TfiI | GAWTC | 4 cut(s) | 1300, 1585, 1852, 1970 |
| Tru1I | TTAA | 7 cut(s) | 240, 390, 861, 1236, 1278, 1434, 1481 |
| Tru9I | TTAA | 7 cut(s) | 240, 390, 861, 1236, 1278, 1434, 1481 |
| TscAI | CASTG | 2 cut(s) | 816, 1501 |
| TseFI | GTSAC | 3 cut(s) | 62, 1652, 2017 |
| TseI | GCWGC | 8 cut(s) | 7, 37, 97, 364, 367, 1641, 1738, 1991 |
| Tsp45I | GTSAC | 3 cut(s) | 62, 1652, 2017 |
| TspRI | CASTG | 2 cut(s) | 816, 1501 |
| VneI | GTGCAC | 1 cut(s) | 108 |
| VpaK11BI | GGWCC | 2 cut(s) | 337, 1963 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 91 |
| XapI | RAATTY | 3 cut(s) | 270, 625, 852 |
| XceI | RCATGY | 6 cut(s) | 53, 1426, 1581, 2018, 2036, 2146 |
| XhoI | CTCGAG | 1 cut(s) | 1416 |
| XmaJI | CCTAGG | 1 cut(s) | 1906 |
| XmnI | GAANNNNTTC | 3 cut(s) | 315, 1299, 1932 |
| XspI | CTAG | 9 cut(s) | 251, 428, 698, 1070, 1242, 1455, 1599, 1907, 2239 |
| Zsp2I | ATGCAT | 1 cut(s) | 414 |