Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 63 - 113 | 3.5e-07 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 142 |
| AciI | CCGC | 2 cut(s) | 84, 140 |
| AcuI | CTGAAG | 1 cut(s) | 267 |
| AfaI | GTAC | 3 cut(s) | 101, 169, 220 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 170 |
| AjnI | CCWGG | 3 cut(s) | 63, 93, 123 |
| Alw26I | GTCTC | 2 cut(s) | 95, 346 |
| AoxI | GGCC | 1 cut(s) | 121 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| AspS9I | GGNCC | 1 cut(s) | 121 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| BanII | GRGCYC | 1 cut(s) | 140 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BccI | CCATC | 1 cut(s) | 188 |
| BciT130I | CCWGG | 3 cut(s) | 65, 95, 125 |
| BcoDI | GTCTC | 2 cut(s) | 95, 346 |
| BisI | GCNGC | 1 cut(s) | 74 |
| BlsI | GCNGC | 1 cut(s) | 75 |
| Bme1390I | CCNGG | 3 cut(s) | 65, 95, 125 |
| BmgT120I | GGNCC | 1 cut(s) | 121 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BmrFI | CCNGG | 3 cut(s) | 65, 95, 125 |
| BmrI | ACTGGG | 1 cut(s) | 231 |
| BmuI | ACTGGG | 1 cut(s) | 231 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 326, 358 |
| BpmI | CTGGAG | 2 cut(s) | 77, 288 |
| BsaI | GGTCTC | 1 cut(s) | 95 |
| BsaJI | CCNNGG | 1 cut(s) | 124 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 127, 157 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 170 |
| Bse1I | ACTGG | 2 cut(s) | 220, 226 |
| BseBI | CCWGG | 3 cut(s) | 65, 95, 125 |
| BseDI | CCNNGG | 1 cut(s) | 124 |
| BseGI | GGATG | 1 cut(s) | 15 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BseNI | ACTGG | 2 cut(s) | 220, 226 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BseYI | CCCAGC | 1 cut(s) | 326 |
| Bsh1236I | CGCG | 1 cut(s) | 142 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 2 cut(s) | 95, 346 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bso31I | GGTCTC | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 1 cut(s) | 140 |
| BspACI | CCGC | 2 cut(s) | 84, 140 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BspFNI | CGCG | 1 cut(s) | 142 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BspTNI | GGTCTC | 1 cut(s) | 95 |
| BsrI | ACTGG | 2 cut(s) | 220, 226 |
| BssECI | CCNNGG | 1 cut(s) | 124 |
| Bst2UI | CCWGG | 3 cut(s) | 65, 95, 125 |
| Bst4CI | ACNGT | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 15 |
| BstFNI | CGCG | 1 cut(s) | 142 |
| BstMAI | GTCTC | 2 cut(s) | 95, 346 |
| BstNI | CCWGG | 3 cut(s) | 65, 95, 125 |
| BstSCI | CCNGG | 3 cut(s) | 63, 93, 123 |
| BstUI | CGCG | 1 cut(s) | 142 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BtsCI | GGATG | 1 cut(s) | 15 |
| Cac8I | GCNNGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 121 |
| CsiI | ACCWGGT | 1 cut(s) | 63 |
| Csp6I | GTAC | 3 cut(s) | 100, 168, 219 |
| CviAII | CATG | 2 cut(s) | 113, 293 |
| CviJI | RGCY | 2 cut(s) | 123, 138 |
| CviKI_1 | RGCY | 2 cut(s) | 123, 138 |
| CviQI | GTAC | 3 cut(s) | 100, 168, 219 |
| Eco24I | GRGCYC | 1 cut(s) | 140 |
| Eco31I | GGTCTC | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 1 cut(s) | 267 |
| EcoRII | CCWGG | 3 cut(s) | 63, 93, 123 |
| EcoT38I | GRGCYC | 1 cut(s) | 140 |
| FaeI | CATG | 2 cut(s) | 116, 296 |
| FaiI | YATR | 7 cut(s) | 53, 71, 114, 207, 254, 279, 294 |
| FatI | CATG | 2 cut(s) | 112, 292 |
| FauI | CCCGC | 1 cut(s) | 147 |
| Fnu4HI | GCNGC | 1 cut(s) | 74 |
| FokI | GGATG | 1 cut(s) | 22 |
| FriOI | GRGCYC | 1 cut(s) | 140 |
| Fsp4HI | GCNGC | 1 cut(s) | 74 |
| GluI | GCNGC | 1 cut(s) | 74 |
| GsaI | CCCAGC | 1 cut(s) | 330 |
| GsuI | CTGGAG | 2 cut(s) | 77, 288 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| Hin1II | CATG | 2 cut(s) | 116, 296 |
| HinfI | GANTC | 1 cut(s) | 234 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy166II | GTNNAC | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 1 cut(s) | 352 |
| Hpy188III | TCNNGA | 1 cut(s) | 305 |
| Hpy8I | GTNNAC | 1 cut(s) | 61 |
| HpyCH4III | ACNGT | 1 cut(s) | 81 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| Hsp92II | CATG | 2 cut(s) | 116, 296 |
| LmnI | GCTCC | 1 cut(s) | 135 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| MabI | ACCWGGT | 1 cut(s) | 63 |
| MboII | GAAGA | 1 cut(s) | 291 |
| MhlI | GDGCHC | 1 cut(s) | 140 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MnlI | CCTC | 9 cut(s) | 11, 49, 99, 125, 171, 263, 310, 324, 328 |
| MseI | TTAA | 1 cut(s) | 186 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| MspR9I | CCNGG | 3 cut(s) | 65, 95, 125 |
| MvaI | CCWGG | 3 cut(s) | 65, 95, 125 |
| MvnI | CGCG | 1 cut(s) | 142 |
| NlaIII | CATG | 2 cut(s) | 116, 296 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| PfoI | TCCNGGA | 1 cut(s) | 93 |
| PkrI | GCNGC | 1 cut(s) | 75 |
| PleI | GAGTC | 1 cut(s) | 242 |
| PpsI | GAGTC | 1 cut(s) | 242 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| Psp6I | CCWGG | 3 cut(s) | 63, 93, 123 |
| PspFI | CCCAGC | 1 cut(s) | 326 |
| PspGI | CCWGG | 3 cut(s) | 63, 93, 123 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| PspPI | GGNCC | 1 cut(s) | 121 |
| RsaI | GTAC | 3 cut(s) | 101, 169, 220 |
| RsaNI | GTAC | 3 cut(s) | 100, 168, 219 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| SatI | GCNGC | 1 cut(s) | 74 |
| Sau96I | GGNCC | 1 cut(s) | 121 |
| SchI | GAGTC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 3 cut(s) | 65, 95, 125 |
| SduI | GDGCHC | 1 cut(s) | 140 |
| SetI | ASST | 7 cut(s) | 60, 69, 110, 163, 274, 315, 360 |
| SexAI | ACCWGGT | 1 cut(s) | 63 |
| SsiI | CCGC | 2 cut(s) | 84, 140 |
| StyD4I | CCNGG | 3 cut(s) | 63, 93, 123 |
| TaaI | ACNGT | 1 cut(s) | 81 |
| TatI | WGTACW | 1 cut(s) | 167 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TseI | GCWGC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 1 cut(s) | 194 |
| TspGWI | ACGGA | 1 cut(s) | 233 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 110, 171 |