Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 67 |
| AclWI | GGATC | 1 cut(s) | 261 |
| AcuI | CTGAAG | 1 cut(s) | 150 |
| AcyI | GRCGYC | 1 cut(s) | 17 |
| AhlI | ACTAGT | 1 cut(s) | 82 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 180, 212 |
| AluBI | AGCT | 4 cut(s) | 102, 271, 292, 384 |
| AluI | AGCT | 4 cut(s) | 102, 271, 292, 384 |
| Alw21I | GWGCWC | 1 cut(s) | 104 |
| Alw26I | GTCTC | 1 cut(s) | 50 |
| AlwI | GGATC | 1 cut(s) | 261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 343 |
| BanII | GRGCYC | 1 cut(s) | 104 |
| BbsI | GAAGAC | 1 cut(s) | 233 |
| Bbv12I | GWGCWC | 1 cut(s) | 104 |
| BcoDI | GTCTC | 1 cut(s) | 50 |
| BcuI | ACTAGT | 1 cut(s) | 82 |
| BfaI | CTAG | 2 cut(s) | 83, 398 |
| BmsI | GCATC | 2 cut(s) | 80, 188 |
| BpiI | GAAGAC | 1 cut(s) | 233 |
| Bpu10I | CCTNAGC | 2 cut(s) | 12, 336 |
| Bsa29I | ATCGAT | 1 cut(s) | 256 |
| BsaHI | GRCGYC | 1 cut(s) | 17 |
| BseCI | ATCGAT | 1 cut(s) | 256 |
| BseMII | CTCAG | 3 cut(s) | 26, 117, 350 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BshVI | ATCGAT | 1 cut(s) | 256 |
| BsiHKAI | GWGCWC | 1 cut(s) | 104 |
| BsmAI | GTCTC | 1 cut(s) | 50 |
| Bsp1286I | GDGCHC | 1 cut(s) | 104 |
| Bsp143I | GATC | 2 cut(s) | 253, 394 |
| BspACI | CCGC | 1 cut(s) | 67 |
| BspCNI | CTCAG | 3 cut(s) | 25, 116, 349 |
| BspDI | ATCGAT | 1 cut(s) | 256 |
| BspPI | GGATC | 1 cut(s) | 261 |
| BssMI | GATC | 2 cut(s) | 253, 394 |
| BssNI | GRCGYC | 1 cut(s) | 17 |
| BstACI | GRCGYC | 1 cut(s) | 17 |
| BstC8I | GCNNGC | 1 cut(s) | 69 |
| BstDEI | CTNAG | 4 cut(s) | 12, 22, 103, 336 |
| BstKTI | GATC | 2 cut(s) | 256, 397 |
| BstMAI | GTCTC | 1 cut(s) | 50 |
| BstMBI | GATC | 2 cut(s) | 253, 394 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 289 |
| BstV2I | GAAGAC | 1 cut(s) | 233 |
| Bsu15I | ATCGAT | 1 cut(s) | 256 |
| BsuTUI | ATCGAT | 1 cut(s) | 256 |
| BtsI | GCAGTG | 1 cut(s) | 341 |
| BtsIMutI | CAGTG | 2 cut(s) | 111, 341 |
| Cac8I | GCNNGC | 1 cut(s) | 69 |
| CaiI | CAGNNNCTG | 1 cut(s) | 343 |
| ClaI | ATCGAT | 1 cut(s) | 256 |
| CseI | GACGC | 1 cut(s) | 6 |
| CviJI | RGCY | 6 cut(s) | 29, 102, 271, 292, 335, 384 |
| CviKI_1 | RGCY | 6 cut(s) | 29, 102, 271, 292, 335, 384 |
| DdeI | CTNAG | 4 cut(s) | 12, 22, 103, 336 |
| DpnI | GATC | 2 cut(s) | 255, 396 |
| DpnII | GATC | 2 cut(s) | 253, 394 |
| Ecl136II | GAGCTC | 1 cut(s) | 102 |
| Eco24I | GRGCYC | 1 cut(s) | 104 |
| Eco53kI | GAGCTC | 1 cut(s) | 102 |
| Eco57I | CTGAAG | 1 cut(s) | 150 |
| EcoICRI | GAGCTC | 1 cut(s) | 102 |
| EcoT38I | GRGCYC | 1 cut(s) | 104 |
| FaiI | YATR | 9 cut(s) | 9, 36, 63, 211, 213, 246, 352, 354, 359 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 215, 247, 276, 308 |
| FauI | CCCGC | 1 cut(s) | 60 |
| FauNDI | CATATG | 2 cut(s) | 211, 352 |
| FriOI | GRGCYC | 1 cut(s) | 104 |
| FspBI | CTAG | 2 cut(s) | 83, 398 |
| HgaI | GACGC | 1 cut(s) | 6 |
| Hin1I | GRCGYC | 1 cut(s) | 17 |
| HincII | GTYRAC | 1 cut(s) | 375 |
| HindII | GTYRAC | 1 cut(s) | 375 |
| HindIII | AAGCTT | 2 cut(s) | 290, 382 |
| HpaI | GTTAAC | 1 cut(s) | 375 |
| Hpy166II | GTNNAC | 1 cut(s) | 375 |
| Hpy188I | TCNGA | 3 cut(s) | 130, 154, 277 |
| Hpy188III | TCNNGA | 3 cut(s) | 75, 185, 398 |
| Hpy8I | GTNNAC | 1 cut(s) | 375 |
| HpyAV | CCTTC | 2 cut(s) | 133, 304 |
| HpyCH4V | TGCA | 1 cut(s) | 43 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 289 |
| HpyF3I | CTNAG | 4 cut(s) | 12, 22, 103, 336 |
| Hsp92I | GRCGYC | 1 cut(s) | 17 |
| KspAI | GTTAAC | 1 cut(s) | 375 |
| Kzo9I | GATC | 2 cut(s) | 253, 394 |
| LmnI | GCTCC | 1 cut(s) | 302 |
| LpnPI | CCDG | 2 cut(s) | 291, 323 |
| LweI | GCATC | 2 cut(s) | 80, 188 |
| MaeI | CTAG | 2 cut(s) | 83, 398 |
| MaeIII | GTNAC | 1 cut(s) | 389 |
| MalI | GATC | 2 cut(s) | 255, 396 |
| MboI | GATC | 2 cut(s) | 253, 394 |
| MboII | GAAGA | 2 cut(s) | 238, 277 |
| MhlI | GDGCHC | 1 cut(s) | 104 |
| MluCI | AATT | 2 cut(s) | 88, 321 |
| MnlI | CCTC | 3 cut(s) | 19, 136, 139 |
| MseI | TTAA | 4 cut(s) | 87, 249, 369, 374 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 289 |
| NdeI | CATATG | 2 cut(s) | 211, 352 |
| NdeII | GATC | 2 cut(s) | 253, 394 |
| NmuCI | GTSAC | 1 cut(s) | 389 |
| Psp124BI | GAGCTC | 1 cut(s) | 104 |
| PstNI | CAGNNNCTG | 1 cut(s) | 343 |
| SacI | GAGCTC | 1 cut(s) | 104 |
| SaqAI | TTAA | 4 cut(s) | 87, 249, 369, 374 |
| Sau3AI | GATC | 2 cut(s) | 253, 394 |
| SduI | GDGCHC | 1 cut(s) | 104 |
| SetI | ASST | 7 cut(s) | 104, 150, 233, 273, 289, 294, 386 |
| SfaNI | GCATC | 2 cut(s) | 80, 188 |
| SpeI | ACTAGT | 1 cut(s) | 82 |
| Sse9I | AATT | 2 cut(s) | 88, 321 |
| SsiI | CCGC | 1 cut(s) | 67 |
| SspMI | CTAG | 2 cut(s) | 83, 398 |
| SstI | GAGCTC | 1 cut(s) | 104 |
| TaqI | TCGA | 2 cut(s) | 168, 256 |
| TasI | AATT | 2 cut(s) | 88, 321 |
| Tru1I | TTAA | 4 cut(s) | 87, 249, 369, 374 |
| Tru9I | TTAA | 4 cut(s) | 87, 249, 369, 374 |
| TscAI | CASTG | 2 cut(s) | 111, 348 |
| TseFI | GTSAC | 1 cut(s) | 389 |
| Tsp45I | GTSAC | 1 cut(s) | 389 |
| TspDTI | ATGAA | 1 cut(s) | 152 |
| TspRI | CASTG | 2 cut(s) | 111, 348 |
| XbaI | TCTAGA | 1 cut(s) | 397 |
| XspI | CTAG | 2 cut(s) | 83, 398 |