NAD(P)H dehydrogenase subunit S
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BCAS2 | PF05700 | 32 - 236 | 9.2e-60 | Breast carcinoma amplified sequence 2 (BCAS2) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 612 |
| AccI | GTMKAC | 1 cut(s) | 162 |
| AccII | CGCG | 1 cut(s) | 288 |
| AciI | CCGC | 7 cut(s) | 21, 53, 56, 207, 286, 338, 654 |
| AcoI | YGGCCR | 1 cut(s) | 71 |
| AcsI | RAATTY | 3 cut(s) | 430, 645, 748 |
| AcuI | CTGAAG | 1 cut(s) | 368 |
| AcyI | GRCGYC | 2 cut(s) | 105, 462 |
| AfaI | GTAC | 3 cut(s) | 116, 281, 476 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 172 |
| AgsI | TTSAA | 4 cut(s) | 253, 650, 671, 748 |
| AjnI | CCWGG | 1 cut(s) | 464 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 233, 265 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 31 |
| AluBI | AGCT | 7 cut(s) | 50, 184, 365, 392, 439, 595, 701 |
| AluI | AGCT | 7 cut(s) | 50, 184, 365, 392, 439, 595, 701 |
| Alw21I | GWGCWC | 1 cut(s) | 186 |
| Alw26I | GTCTC | 1 cut(s) | 367 |
| AoxI | GGCC | 4 cut(s) | 71, 76, 454, 739 |
| ApaI | GGGCCC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 5 cut(s) | 143, 192, 365, 406, 701 |
| ApoI | RAATTY | 3 cut(s) | 430, 645, 748 |
| AspLEI | GCGC | 3 cut(s) | 143, 197, 613 |
| AspS9I | GGNCC | 5 cut(s) | 62, 76, 77, 455, 740 |
| AsuC2I | CCSGG | 1 cut(s) | 75 |
| AvaII | GGWCC | 1 cut(s) | 62 |
| BaeGI | GKGCMC | 1 cut(s) | 80 |
| BanII | GRGCYC | 2 cut(s) | 80, 186 |
| BbsI | GAAGAC | 1 cut(s) | 132 |
| Bbv12I | GWGCWC | 1 cut(s) | 186 |
| BbvI | GCAGC | 5 cut(s) | 155, 204, 352, 418, 688 |
| BccI | CCATC | 1 cut(s) | 436 |
| BceAI | ACGGC | 2 cut(s) | 97, 131 |
| BciT130I | CCWGG | 1 cut(s) | 466 |
| BcnI | CCSGG | 1 cut(s) | 75 |
| BcoDI | GTCTC | 1 cut(s) | 367 |
| BfmI | CTRYAG | 1 cut(s) | 702 |
| BfoI | RGCGCY | 1 cut(s) | 198 |
| BisI | GCNGC | 7 cut(s) | 56, 144, 193, 366, 407, 654, 702 |
| BlsI | GCNGC | 7 cut(s) | 57, 145, 194, 367, 408, 655, 703 |
| Bme1390I | CCNGG | 2 cut(s) | 75, 466 |
| Bme18I | GGWCC | 1 cut(s) | 62 |
| BmgT120I | GGNCC | 5 cut(s) | 62, 76, 77, 455, 740 |
| BmiI | GGNNCC | 3 cut(s) | 78, 79, 547 |
| BmrFI | CCNGG | 2 cut(s) | 75, 466 |
| BmsI | GCATC | 1 cut(s) | 333 |
| BpiI | GAAGAC | 1 cut(s) | 132 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 364, 396 |
| BpmI | CTGGAG | 1 cut(s) | 310 |
| BpuMI | CCSGG | 1 cut(s) | 75 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 462 |
| BsaJI | CCNNGG | 1 cut(s) | 309 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 172 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| Bse3DI | GCAATG | 1 cut(s) | 620 |
| BseBI | CCWGG | 1 cut(s) | 466 |
| BseDI | CCNNGG | 1 cut(s) | 309 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 172 |
| BseMI | GCAATG | 1 cut(s) | 620 |
| BseMII | CTCAG | 1 cut(s) | 407 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseSI | GKGCMC | 1 cut(s) | 80 |
| BseXI | GCAGC | 5 cut(s) | 155, 204, 352, 418, 688 |
| Bsh1236I | CGCG | 1 cut(s) | 288 |
| Bsh1285I | CGRYCG | 1 cut(s) | 286 |
| BshFI | GGCC | 4 cut(s) | 73, 78, 456, 741 |
| BsiEI | CGRYCG | 1 cut(s) | 286 |
| BsiHKAI | GWGCWC | 1 cut(s) | 186 |
| BsiSI | CCGG | 1 cut(s) | 74 |
| BslFI | GGGAC | 1 cut(s) | 731 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 172 |
| BsmAI | GTCTC | 1 cut(s) | 367 |
| BsmFI | GGGAC | 1 cut(s) | 731 |
| BsnI | GGCC | 4 cut(s) | 73, 78, 456, 741 |
| Bsp120I | GGGCCC | 1 cut(s) | 76 |
| Bsp1286I | GDGCHC | 2 cut(s) | 80, 186 |
| Bsp143I | GATC | 1 cut(s) | 96 |
| BspACI | CCGC | 7 cut(s) | 21, 53, 56, 207, 286, 338, 654 |
| BspANI | GGCC | 4 cut(s) | 73, 78, 456, 741 |
| BspCNI | CTCAG | 1 cut(s) | 406 |
| BspFNI | CGCG | 1 cut(s) | 288 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 3 cut(s) | 78, 79, 547 |
| BspMAI | CTGCAG | 1 cut(s) | 706 |
| BspQI | GCTCTTC | 2 cut(s) | 174, 387 |
| BsrDI | GCAATG | 1 cut(s) | 620 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| BssECI | CCNNGG | 1 cut(s) | 309 |
| BssMI | GATC | 1 cut(s) | 96 |
| BssNI | GRCGYC | 2 cut(s) | 105, 462 |
| Bst2UI | CCWGG | 1 cut(s) | 466 |
| Bst4CI | ACNGT | 1 cut(s) | 550 |
| Bst6I | CTCTTC | 3 cut(s) | 174, 344, 387 |
| BstACI | GRCGYC | 2 cut(s) | 105, 462 |
| BstC8I | GCNNGC | 3 cut(s) | 25, 139, 207 |
| BstDEI | CTNAG | 1 cut(s) | 393 |
| BstDSI | CCRYGG | 1 cut(s) | 309 |
| BstFNI | CGCG | 1 cut(s) | 288 |
| BstH2I | RGCGCY | 1 cut(s) | 198 |
| BstHHI | GCGC | 3 cut(s) | 143, 197, 613 |
| BstKTI | GATC | 1 cut(s) | 99 |
| BstMAI | GTCTC | 1 cut(s) | 367 |
| BstMBI | GATC | 1 cut(s) | 96 |
| BstMCI | CGRYCG | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 143, 608, 659 |
| BstNI | CCWGG | 1 cut(s) | 466 |
| BstNSI | RCATGY | 1 cut(s) | 660 |
| BstSCI | CCNGG | 2 cut(s) | 73, 464 |
| BstSFI | CTRYAG | 1 cut(s) | 702 |
| BstSLI | GKGCMC | 1 cut(s) | 80 |
| BstUI | CGCG | 1 cut(s) | 288 |
| BstV1I | GCAGC | 5 cut(s) | 155, 204, 352, 418, 688 |
| BstV2I | GAAGAC | 1 cut(s) | 132 |
| BsuRI | GGCC | 4 cut(s) | 73, 78, 456, 741 |
| BtgI | CCRYGG | 1 cut(s) | 309 |
| BtsI | GCAGTG | 1 cut(s) | 582 |
| BtsIMutI | CAGTG | 2 cut(s) | 401, 582 |
| Cac8I | GCNNGC | 3 cut(s) | 25, 139, 207 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 3 cut(s) | 143, 197, 613 |
| Cfr13I | GGNCC | 5 cut(s) | 62, 76, 77, 455, 740 |
| CseI | GACGC | 2 cut(s) | 113, 470 |
| Csp6I | GTAC | 3 cut(s) | 115, 280, 475 |
| CviAII | CATG | 3 cut(s) | 169, 524, 657 |
| CviQI | GTAC | 3 cut(s) | 115, 280, 475 |
| DdeI | CTNAG | 1 cut(s) | 393 |
| DpnI | GATC | 1 cut(s) | 98 |
| DpnII | GATC | 1 cut(s) | 96 |
| EaeI | YGGCCR | 1 cut(s) | 71 |
| Eam1104I | CTCTTC | 3 cut(s) | 174, 344, 387 |
| EarI | CTCTTC | 3 cut(s) | 174, 344, 387 |
| EciI | GGCGGA | 1 cut(s) | 42 |
| Ecl136II | GAGCTC | 1 cut(s) | 184 |
| Eco24I | GRGCYC | 2 cut(s) | 80, 186 |
| Eco47I | GGWCC | 1 cut(s) | 62 |
| Eco53kI | GAGCTC | 1 cut(s) | 184 |
| Eco57I | CTGAAG | 1 cut(s) | 368 |
| EcoICRI | GAGCTC | 1 cut(s) | 184 |
| EcoO109I | RGGNCCY | 1 cut(s) | 77 |
| EcoRI | GAATTC | 1 cut(s) | 748 |
| EcoRII | CCWGG | 1 cut(s) | 464 |
| EcoT38I | GRGCYC | 2 cut(s) | 80, 186 |
| FaeI | CATG | 3 cut(s) | 172, 527, 660 |
| FaiI | YATR | 9 cut(s) | 170, 453, 525, 589, 591, 641, 658, 678, 680 |
| FaqI | GGGAC | 1 cut(s) | 731 |
| FatI | CATG | 3 cut(s) | 168, 523, 656 |
| FauI | CCCGC | 1 cut(s) | 214 |
| FauNDI | CATATG | 1 cut(s) | 589 |
| FblI | GTMKAC | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 7 cut(s) | 56, 144, 193, 366, 407, 654, 702 |
| FriOI | GRGCYC | 2 cut(s) | 80, 186 |
| Fsp4HI | GCNGC | 7 cut(s) | 56, 144, 193, 366, 407, 654, 702 |
| FspI | TGCGCA | 1 cut(s) | 612 |
| GlaI | GCGC | 3 cut(s) | 142, 196, 612 |
| GluI | GCNGC | 7 cut(s) | 56, 144, 193, 366, 407, 654, 702 |
| GsuI | CTGGAG | 1 cut(s) | 310 |
| HaeII | RGCGCY | 1 cut(s) | 198 |
| HaeIII | GGCC | 4 cut(s) | 73, 78, 456, 741 |
| HapII | CCGG | 1 cut(s) | 74 |
| HgaI | GACGC | 2 cut(s) | 113, 470 |
| HhaI | GCGC | 3 cut(s) | 143, 197, 613 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 462 |
| Hin1II | CATG | 3 cut(s) | 172, 527, 660 |
| Hin6I | GCGC | 3 cut(s) | 141, 195, 611 |
| HinP1I | GCGC | 3 cut(s) | 141, 195, 611 |
| HincII | GTYRAC | 1 cut(s) | 163 |
| HindII | GTYRAC | 1 cut(s) | 163 |
| HinfI | GANTC | 2 cut(s) | 469, 553 |
| HpaII | CCGG | 1 cut(s) | 74 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 3 cut(s) | 387, 633, 754 |
| Hpy188III | TCNNGA | 7 cut(s) | 151, 253, 317, 327, 504, 524, 557 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| Hpy99I | CGWCG | 4 cut(s) | 70, 107, 125, 192 |
| HpyAV | CCTTC | 1 cut(s) | 613 |
| HpyCH4III | ACNGT | 1 cut(s) | 550 |
| HpyCH4V | TGCA | 5 cut(s) | 490, 511, 587, 704, 733 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 143, 608, 659 |
| HpyF3I | CTNAG | 1 cut(s) | 393 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 462 |
| Hsp92II | CATG | 3 cut(s) | 172, 527, 660 |
| HspAI | GCGC | 3 cut(s) | 141, 195, 611 |
| Kzo9I | GATC | 1 cut(s) | 96 |
| LguI | GCTCTTC | 2 cut(s) | 174, 387 |
| LmnI | GCTCC | 3 cut(s) | 55, 189, 436 |
| Lsp1109I | GCAGC | 5 cut(s) | 155, 204, 352, 418, 688 |
| LweI | GCATC | 1 cut(s) | 333 |
| MalI | GATC | 1 cut(s) | 98 |
| MboI | GATC | 1 cut(s) | 96 |
| MboII | GAAGA | 4 cut(s) | 137, 191, 361, 374 |
| MhlI | GDGCHC | 2 cut(s) | 80, 186 |
| MluCI | AATT | 7 cut(s) | 247, 430, 515, 645, 666, 673, 748 |
| MmeI | TCCRAC | 1 cut(s) | 405 |
| MseI | TTAA | 5 cut(s) | 38, 83, 518, 597, 722 |
| MspI | CCGG | 1 cut(s) | 74 |
| MspR9I | CCNGG | 2 cut(s) | 75, 466 |
| MvaI | CCWGG | 1 cut(s) | 466 |
| MvnI | CGCG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 143, 608, 659 |
| NciI | CCSGG | 1 cut(s) | 75 |
| NdeI | CATATG | 1 cut(s) | 589 |
| NdeII | GATC | 1 cut(s) | 96 |
| NlaIII | CATG | 3 cut(s) | 172, 527, 660 |
| NlaIV | GGNNCC | 3 cut(s) | 78, 79, 547 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| NsbI | TGCGCA | 1 cut(s) | 612 |
| NspI | RCATGY | 1 cut(s) | 660 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PciSI | GCTCTTC | 2 cut(s) | 174, 387 |
| PfeI | GAWTC | 2 cut(s) | 469, 553 |
| PkrI | GCNGC | 7 cut(s) | 57, 145, 194, 367, 408, 655, 703 |
| Psp124BI | GAGCTC | 1 cut(s) | 186 |
| Psp6I | CCWGG | 1 cut(s) | 464 |
| PspGI | CCWGG | 1 cut(s) | 464 |
| PspN4I | GGNNCC | 3 cut(s) | 78, 79, 547 |
| PspOMI | GGGCCC | 1 cut(s) | 76 |
| PspPI | GGNCC | 5 cut(s) | 62, 76, 77, 455, 740 |
| PstI | CTGCAG | 1 cut(s) | 706 |
| RsaI | GTAC | 3 cut(s) | 116, 281, 476 |
| RsaNI | GTAC | 3 cut(s) | 115, 280, 475 |
| SacI | GAGCTC | 1 cut(s) | 186 |
| SalI | GTCGAC | 1 cut(s) | 161 |
| SapI | GCTCTTC | 2 cut(s) | 174, 387 |
| SaqAI | TTAA | 5 cut(s) | 38, 83, 518, 597, 722 |
| SatI | GCNGC | 7 cut(s) | 56, 144, 193, 366, 407, 654, 702 |
| Sau3AI | GATC | 1 cut(s) | 96 |
| Sau96I | GGNCC | 5 cut(s) | 62, 76, 77, 455, 740 |
| ScrFI | CCNGG | 2 cut(s) | 75, 466 |
| SduI | GDGCHC | 2 cut(s) | 80, 186 |
| SfaNI | GCATC | 1 cut(s) | 333 |
| SfcI | CTRYAG | 1 cut(s) | 702 |
| SinI | GGWCC | 1 cut(s) | 62 |
| Sse9I | AATT | 7 cut(s) | 247, 430, 515, 645, 666, 673, 748 |
| SsiI | CCGC | 7 cut(s) | 21, 53, 56, 207, 286, 338, 654 |
| SstI | GAGCTC | 1 cut(s) | 186 |
| StyD4I | CCNGG | 2 cut(s) | 73, 464 |
| TaaI | ACNGT | 1 cut(s) | 550 |
| TaqI | TCGA | 4 cut(s) | 102, 120, 162, 503 |
| TasI | AATT | 7 cut(s) | 247, 430, 515, 645, 666, 673, 748 |
| TatI | WGTACW | 1 cut(s) | 474 |
| TauI | GCSGC | 2 cut(s) | 58, 656 |
| TfiI | GAWTC | 2 cut(s) | 469, 553 |
| Tru1I | TTAA | 5 cut(s) | 38, 83, 518, 597, 722 |
| Tru9I | TTAA | 5 cut(s) | 38, 83, 518, 597, 722 |
| TscAI | CASTG | 2 cut(s) | 401, 589 |
| TseI | GCWGC | 5 cut(s) | 143, 192, 365, 406, 701 |
| TspDTI | ATGAA | 3 cut(s) | 375, 540, 699 |
| TspGWI | ACGGA | 2 cut(s) | 54, 176 |
| TspRI | CASTG | 2 cut(s) | 401, 589 |
| VpaK11BI | GGWCC | 1 cut(s) | 62 |
| XapI | RAATTY | 3 cut(s) | 430, 645, 748 |
| XceI | RCATGY | 1 cut(s) | 660 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 307 |
| XmiI | GTMKAC | 1 cut(s) | 162 |