Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 49, 226 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 256 |
| Acc36I | ACCTGC | 2 cut(s) | 49, 226 |
| AccI | GTMKAC | 1 cut(s) | 23 |
| AclWI | GGATC | 4 cut(s) | 92, 268, 281, 554 |
| AcsI | RAATTY | 2 cut(s) | 109, 123 |
| AfaI | GTAC | 1 cut(s) | 243 |
| AflIII | ACRYGT | 1 cut(s) | 459 |
| AgsI | TTSAA | 1 cut(s) | 212 |
| AhlI | ACTAGT | 1 cut(s) | 508 |
| AjiI | CACGTC | 1 cut(s) | 460 |
| AjnI | CCWGG | 1 cut(s) | 142 |
| AluBI | AGCT | 5 cut(s) | 72, 205, 295, 317, 566 |
| AluI | AGCT | 5 cut(s) | 72, 205, 295, 317, 566 |
| AlwI | GGATC | 4 cut(s) | 92, 268, 281, 554 |
| ApoI | RAATTY | 2 cut(s) | 109, 123 |
| AspS9I | GGNCC | 1 cut(s) | 227 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| AvaII | GGWCC | 1 cut(s) | 227 |
| BamHI | GGATCC | 1 cut(s) | 273 |
| BccI | CCATC | 4 cut(s) | 58, 305, 374, 609 |
| BciT130I | CCWGG | 1 cut(s) | 144 |
| BcuI | ACTAGT | 1 cut(s) | 508 |
| BfaI | CTAG | 3 cut(s) | 261, 480, 509 |
| BfuAI | ACCTGC | 2 cut(s) | 49, 226 |
| Bme1390I | CCNGG | 1 cut(s) | 144 |
| Bme18I | GGWCC | 1 cut(s) | 227 |
| BmgBI | CACGTC | 1 cut(s) | 460 |
| BmgT120I | GGNCC | 1 cut(s) | 227 |
| BmiI | GGNNCC | 2 cut(s) | 141, 275 |
| BmrFI | CCNGG | 1 cut(s) | 144 |
| BpmI | CTGGAG | 2 cut(s) | 114, 187 |
| Bpu10I | CCTNAGC | 1 cut(s) | 135 |
| BsaBI | GATNNNNATC | 1 cut(s) | 102 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| Bse8I | GATNNNNATC | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 144 |
| BseGI | GGATG | 3 cut(s) | 80, 385, 417 |
| BseJI | GATNNNNATC | 1 cut(s) | 102 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| Bsp143I | GATC | 3 cut(s) | 97, 273, 559 |
| BspLI | GGNNCC | 2 cut(s) | 141, 275 |
| BspMI | ACCTGC | 2 cut(s) | 49, 226 |
| BspPI | GGATC | 4 cut(s) | 92, 268, 281, 554 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssMI | GATC | 3 cut(s) | 97, 273, 559 |
| BssNAI | GTATAC | 1 cut(s) | 24 |
| Bst1107I | GTATAC | 1 cut(s) | 24 |
| Bst2UI | CCWGG | 1 cut(s) | 144 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstDEI | CTNAG | 2 cut(s) | 6, 135 |
| BstF5I | GGATG | 3 cut(s) | 80, 385, 417 |
| BstKTI | GATC | 3 cut(s) | 100, 276, 562 |
| BstMBI | GATC | 3 cut(s) | 97, 273, 559 |
| BstNI | CCWGG | 1 cut(s) | 144 |
| BstSCI | CCNGG | 1 cut(s) | 142 |
| BstX2I | RGATCY | 3 cut(s) | 97, 273, 559 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 496 |
| BstYI | RGATCY | 3 cut(s) | 97, 273, 559 |
| BstZ17I | GTATAC | 1 cut(s) | 24 |
| BtrI | CACGTC | 1 cut(s) | 460 |
| BtsCI | GGATG | 3 cut(s) | 80, 385, 417 |
| BtsIMutI | CAGTG | 1 cut(s) | 222 |
| BveI | ACCTGC | 2 cut(s) | 49, 226 |
| Cfr13I | GGNCC | 1 cut(s) | 227 |
| CseI | GACGC | 1 cut(s) | 587 |
| Csp6I | GTAC | 1 cut(s) | 242 |
| CviAII | CATG | 3 cut(s) | 247, 449, 493 |
| CviJI | RGCY | 8 cut(s) | 72, 173, 205, 254, 295, 317, 500, 566 |
| CviKI_1 | RGCY | 8 cut(s) | 72, 173, 205, 254, 295, 317, 500, 566 |
| CviQI | GTAC | 1 cut(s) | 242 |
| DdeI | CTNAG | 2 cut(s) | 6, 135 |
| DpnI | GATC | 3 cut(s) | 99, 275, 561 |
| DpnII | GATC | 3 cut(s) | 97, 273, 559 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 256 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 256 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco47I | GGWCC | 1 cut(s) | 227 |
| EcoRII | CCWGG | 1 cut(s) | 142 |
| FaeI | CATG | 3 cut(s) | 250, 452, 496 |
| FatI | CATG | 3 cut(s) | 246, 448, 492 |
| FblI | GTMKAC | 1 cut(s) | 23 |
| FokI | GGATG | 3 cut(s) | 67, 392, 404 |
| FspBI | CTAG | 3 cut(s) | 261, 480, 509 |
| GsuI | CTGGAG | 2 cut(s) | 114, 187 |
| HgaI | GACGC | 1 cut(s) | 587 |
| Hin1II | CATG | 3 cut(s) | 250, 452, 496 |
| HincII | GTYRAC | 1 cut(s) | 178 |
| HindII | GTYRAC | 1 cut(s) | 178 |
| HinfI | GANTC | 1 cut(s) | 527 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 4 cut(s) | 24, 178, 244, 446 |
| Hpy188I | TCNGA | 1 cut(s) | 434 |
| Hpy188III | TCNNGA | 3 cut(s) | 93, 166, 374 |
| Hpy8I | GTNNAC | 4 cut(s) | 24, 178, 244, 446 |
| HpyAV | CCTTC | 1 cut(s) | 240 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyCH4IV | ACGT | 1 cut(s) | 459 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 154 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 135 |
| HpySE526I | ACGT | 1 cut(s) | 459 |
| Hsp92II | CATG | 3 cut(s) | 250, 452, 496 |
| Kzo9I | GATC | 3 cut(s) | 97, 273, 559 |
| LmnI | GCTCC | 3 cut(s) | 55, 314, 481 |
| MaeI | CTAG | 3 cut(s) | 261, 480, 509 |
| MaeII | ACGT | 1 cut(s) | 459 |
| MaeIII | GTNAC | 2 cut(s) | 218, 596 |
| MalI | GATC | 3 cut(s) | 99, 275, 561 |
| MboI | GATC | 3 cut(s) | 97, 273, 559 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MflI | RGATCY | 3 cut(s) | 97, 273, 559 |
| MluCI | AATT | 3 cut(s) | 109, 123, 587 |
| MnlI | CCTC | 4 cut(s) | 45, 162, 337, 370 |
| MseI | TTAA | 1 cut(s) | 610 |
| MspR9I | CCNGG | 1 cut(s) | 144 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| MvaI | CCWGG | 1 cut(s) | 144 |
| NdeII | GATC | 3 cut(s) | 97, 273, 559 |
| NlaIII | CATG | 3 cut(s) | 250, 452, 496 |
| NlaIV | GGNNCC | 2 cut(s) | 141, 275 |
| PaqCI | CACCTGC | 2 cut(s) | 49, 226 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PfeI | GAWTC | 1 cut(s) | 527 |
| PfoI | TCCNGGA | 1 cut(s) | 142 |
| Psp6I | CCWGG | 1 cut(s) | 142 |
| PspGI | CCWGG | 1 cut(s) | 142 |
| PspN4I | GGNNCC | 2 cut(s) | 141, 275 |
| PspPI | GGNCC | 1 cut(s) | 227 |
| PsuI | RGATCY | 3 cut(s) | 97, 273, 559 |
| RsaI | GTAC | 1 cut(s) | 243 |
| RsaNI | GTAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 1 cut(s) | 610 |
| Sau3AI | GATC | 3 cut(s) | 97, 273, 559 |
| Sau96I | GGNCC | 1 cut(s) | 227 |
| ScrFI | CCNGG | 1 cut(s) | 144 |
| SinI | GGWCC | 1 cut(s) | 227 |
| SpeI | ACTAGT | 1 cut(s) | 508 |
| Sse9I | AATT | 3 cut(s) | 109, 123, 587 |
| SspI | AATATT | 1 cut(s) | 337 |
| SspMI | CTAG | 3 cut(s) | 261, 480, 509 |
| StyD4I | CCNGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TaiI | ACGT | 1 cut(s) | 462 |
| TaqI | TCGA | 2 cut(s) | 106, 591 |
| TasI | AATT | 3 cut(s) | 109, 123, 587 |
| TfiI | GAWTC | 1 cut(s) | 527 |
| Tru1I | TTAA | 1 cut(s) | 610 |
| Tru9I | TTAA | 1 cut(s) | 610 |
| TscAI | CASTG | 1 cut(s) | 229 |
| TspDTI | ATGAA | 2 cut(s) | 78, 540 |
| TspRI | CASTG | 1 cut(s) | 229 |
| VpaK11BI | GGWCC | 1 cut(s) | 227 |
| XapI | RAATTY | 2 cut(s) | 109, 123 |
| XmiI | GTMKAC | 1 cut(s) | 23 |
| XspI | CTAG | 3 cut(s) | 261, 480, 509 |