Ubiquitin carboxyl-terminal hydrolase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Choline_transpo | PF04515 | 270 - 554 | 3.4e-37 | Plasma-membrane choline transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1293 |
| Acc65I | GGTACC | 1 cut(s) | 294 |
| AccB1I | GGYRCC | 2 cut(s) | 5, 294 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 942 |
| AccII | CGCG | 1 cut(s) | 862 |
| AciI | CCGC | 6 cut(s) | 9, 522, 860, 862, 1524, 1551 |
| AclWI | GGATC | 4 cut(s) | 860, 1207, 1604, 1698 |
| AcoI | YGGCCR | 2 cut(s) | 519, 1548 |
| AcsI | RAATTY | 3 cut(s) | 577, 1006, 1425 |
| AcuI | CTGAAG | 1 cut(s) | 33 |
| AcyI | GRCGYC | 1 cut(s) | 1479 |
| AdeI | CACNNNGTG | 1 cut(s) | 517 |
| AfaI | GTAC | 5 cut(s) | 296, 325, 842, 1533, 1725 |
| AfeI | AGCGCT | 2 cut(s) | 268, 1227 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 528, 866, 942 |
| AgsI | TTSAA | 7 cut(s) | 149, 553, 928, 1006, 1223, 1415, 1708 |
| AhlI | ACTAGT | 1 cut(s) | 1024 |
| AjnI | CCWGG | 1 cut(s) | 1592 |
| AluBI | AGCT | 6 cut(s) | 17, 106, 837, 1085, 1408, 1458 |
| AluI | AGCT | 6 cut(s) | 17, 106, 837, 1085, 1408, 1458 |
| Alw21I | GWGCWC | 2 cut(s) | 513, 1410 |
| Alw26I | GTCTC | 4 cut(s) | 369, 978, 1307, 1391 |
| Alw44I | GTGCAC | 1 cut(s) | 509 |
| AlwI | GGATC | 4 cut(s) | 860, 1207, 1604, 1698 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 568 |
| Ama87I | CYCGRG | 2 cut(s) | 1242, 1740 |
| Aor51HI | AGCGCT | 2 cut(s) | 268, 1227 |
| AoxI | GGCC | 4 cut(s) | 519, 698, 1344, 1548 |
| ApaLI | GTGCAC | 1 cut(s) | 509 |
| ApeKI | GCWGC | 5 cut(s) | 269, 641, 1361, 1514, 1760 |
| ApoI | RAATTY | 3 cut(s) | 577, 1006, 1425 |
| AseI | ATTAAT | 1 cut(s) | 165 |
| Asp718I | GGTACC | 1 cut(s) | 294 |
| AspLEI | GCGC | 3 cut(s) | 269, 1228, 1294 |
| AspS9I | GGNCC | 2 cut(s) | 1344, 1521 |
| AsuHPI | GGTGA | 2 cut(s) | 1117, 1444 |
| AvaI | CYCGRG | 2 cut(s) | 1242, 1740 |
| AvaII | GGWCC | 1 cut(s) | 1521 |
| BaeGI | GKGCMC | 1 cut(s) | 513 |
| BanI | GGYRCC | 2 cut(s) | 5, 294 |
| BanII | GRGCYC | 1 cut(s) | 1410 |
| Bbv12I | GWGCWC | 2 cut(s) | 513, 1410 |
| BbvCI | CCTCAGC | 1 cut(s) | 408 |
| BbvI | GCAGC | 4 cut(s) | 256, 628, 1373, 1501 |
| BccI | CCATC | 2 cut(s) | 340, 346 |
| BceAI | ACGGC | 2 cut(s) | 1354, 1563 |
| BciT130I | CCWGG | 1 cut(s) | 1594 |
| BciVI | GTATCC | 1 cut(s) | 1574 |
| BclI | TGATCA | 1 cut(s) | 888 |
| BcoDI | GTCTC | 4 cut(s) | 369, 978, 1307, 1391 |
| BcuI | ACTAGT | 1 cut(s) | 1024 |
| BfaI | CTAG | 3 cut(s) | 20, 533, 1025 |
| BfmI | CTRYAG | 1 cut(s) | 1483 |
| BfoI | RGCGCY | 2 cut(s) | 270, 1229 |
| BfuI | GTATCC | 1 cut(s) | 1574 |
| BisI | GCNGC | 9 cut(s) | 9, 270, 522, 642, 860, 1362, 1515, 1551, 1761 |
| BlsI | GCNGC | 9 cut(s) | 10, 271, 523, 643, 861, 1363, 1516, 1552, 1762 |
| Bme1390I | CCNGG | 1 cut(s) | 1594 |
| Bme18I | GGWCC | 1 cut(s) | 1521 |
| BmeT110I | CYCGRG | 2 cut(s) | 1242, 1740 |
| BmgT120I | GGNCC | 2 cut(s) | 1344, 1521 |
| BmiI | GGNNCC | 3 cut(s) | 7, 296, 1000 |
| BmrFI | CCNGG | 1 cut(s) | 1594 |
| BmsI | GCATC | 4 cut(s) | 653, 936, 1329, 1397 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 646, 678 |
| Bpu10I | CCTNAGC | 1 cut(s) | 408 |
| BpuEI | CTTGAG | 3 cut(s) | 451, 1189, 1280 |
| BsaBI | GATNNNNATC | 2 cut(s) | 887, 927 |
| BsaHI | GRCGYC | 1 cut(s) | 1479 |
| BsaJI | CCNNGG | 1 cut(s) | 860 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 319, 349, 376, 379, 406, 409 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 528, 866, 942 |
| Bse118I | RCCGGY | 2 cut(s) | 1475, 1752 |
| Bse1I | ACTGG | 2 cut(s) | 799, 947 |
| Bse3DI | GCAATG | 2 cut(s) | 1294, 1608 |
| Bse8I | GATNNNNATC | 2 cut(s) | 887, 927 |
| BseBI | CCWGG | 1 cut(s) | 1594 |
| BseDI | CCNNGG | 1 cut(s) | 860 |
| BseGI | GGATG | 4 cut(s) | 951, 975, 1276, 1634 |
| BseJI | GATNNNNATC | 2 cut(s) | 887, 927 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 528, 866, 942 |
| BseMI | GCAATG | 2 cut(s) | 1294, 1608 |
| BseMII | CTCAG | 5 cut(s) | 422, 431, 1138, 1160, 1220 |
| BseNI | ACTGG | 2 cut(s) | 799, 947 |
| BseSI | GKGCMC | 1 cut(s) | 513 |
| BseX3I | CGGCCG | 1 cut(s) | 1548 |
| BseXI | GCAGC | 4 cut(s) | 256, 628, 1373, 1501 |
| BseYI | CCCAGC | 1 cut(s) | 1341 |
| Bsh1236I | CGCG | 1 cut(s) | 862 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1551 |
| BshFI | GGCC | 4 cut(s) | 521, 700, 1346, 1550 |
| BshNI | GGYRCC | 2 cut(s) | 5, 294 |
| BsiEI | CGRYCG | 1 cut(s) | 1551 |
| BsiHKAI | GWGCWC | 2 cut(s) | 513, 1410 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1242, 1740 |
| BsiSI | CCGG | 2 cut(s) | 1476, 1753 |
| BslFI | GGGAC | 1 cut(s) | 1730 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 528, 866, 942 |
| BsmAI | GTCTC | 4 cut(s) | 369, 978, 1307, 1391 |
| BsmFI | GGGAC | 1 cut(s) | 1730 |
| BsmI | GAATGC | 3 cut(s) | 412, 1137, 1568 |
| BsnI | GGCC | 4 cut(s) | 521, 700, 1346, 1550 |
| BsoBI | CYCGRG | 2 cut(s) | 1242, 1740 |
| Bsp1286I | GDGCHC | 2 cut(s) | 513, 1410 |
| Bsp143I | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| BspACI | CCGC | 6 cut(s) | 9, 522, 860, 862, 1524, 1551 |
| BspANI | GGCC | 4 cut(s) | 521, 700, 1346, 1550 |
| BspCNI | CTCAG | 5 cut(s) | 421, 430, 1137, 1159, 1221 |
| BspFNI | CGCG | 1 cut(s) | 862 |
| BspHI | TCATGA | 2 cut(s) | 169, 741 |
| BspLI | GGNNCC | 3 cut(s) | 7, 296, 1000 |
| BspMAI | CTGCAG | 1 cut(s) | 1487 |
| BspPI | GGATC | 4 cut(s) | 860, 1207, 1604, 1698 |
| BspT107I | GGYRCC | 2 cut(s) | 5, 294 |
| BsrDI | GCAATG | 2 cut(s) | 1294, 1608 |
| BsrFI | RCCGGY | 2 cut(s) | 1475, 1752 |
| BsrI | ACTGG | 2 cut(s) | 799, 947 |
| BssAI | RCCGGY | 2 cut(s) | 1475, 1752 |
| BssECI | CCNNGG | 1 cut(s) | 860 |
| BssMI | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| BssNI | GRCGYC | 1 cut(s) | 1479 |
| Bst2UI | CCWGG | 1 cut(s) | 1594 |
| Bst4CI | ACNGT | 2 cut(s) | 1096, 1531 |
| Bst6I | CTCTTC | 2 cut(s) | 36, 78 |
| BstACI | GRCGYC | 1 cut(s) | 1479 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1646 |
| BstC8I | GCNNGC | 3 cut(s) | 1215, 1566, 1642 |
| BstDEI | CTNAG | 5 cut(s) | 408, 417, 1124, 1146, 1229 |
| BstDSI | CCRYGG | 1 cut(s) | 860 |
| BstF5I | GGATG | 4 cut(s) | 951, 975, 1276, 1634 |
| BstFNI | CGCG | 1 cut(s) | 862 |
| BstH2I | RGCGCY | 2 cut(s) | 270, 1229 |
| BstHHI | GCGC | 3 cut(s) | 269, 1228, 1294 |
| BstKTI | GATC | 6 cut(s) | 175, 855, 891, 1202, 1599, 1693 |
| BstMAI | GTCTC | 4 cut(s) | 369, 978, 1307, 1391 |
| BstMBI | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| BstMCI | CGRYCG | 1 cut(s) | 1551 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 14, 418, 1223, 1464, 1523, 1646 |
| BstNI | CCWGG | 1 cut(s) | 1594 |
| BstNSI | RCATGY | 2 cut(s) | 1619, 1644 |
| BstSCI | CCNGG | 1 cut(s) | 1592 |
| BstSFI | CTRYAG | 1 cut(s) | 1483 |
| BstSLI | GKGCMC | 1 cut(s) | 513 |
| BstUI | CGCG | 1 cut(s) | 862 |
| BstV1I | GCAGC | 4 cut(s) | 256, 628, 1373, 1501 |
| BstX2I | RGATCY | 1 cut(s) | 1199 |
| BstYI | RGATCY | 1 cut(s) | 1199 |
| BstZI | CGGCCG | 1 cut(s) | 1548 |
| BsuI | GTATCC | 1 cut(s) | 1574 |
| BsuRI | GGCC | 4 cut(s) | 521, 700, 1346, 1550 |
| BtgI | CCRYGG | 1 cut(s) | 860 |
| BtsCI | GGATG | 4 cut(s) | 951, 975, 1276, 1634 |
| BtsI | GCAGTG | 2 cut(s) | 1322, 1492 |
| BtsIMutI | CAGTG | 3 cut(s) | 458, 1322, 1492 |
| Cac8I | GCNNGC | 3 cut(s) | 1215, 1566, 1642 |
| CaiI | CAGNNNCTG | 1 cut(s) | 568 |
| CciI | TCATGA | 2 cut(s) | 169, 741 |
| CfoI | GCGC | 3 cut(s) | 269, 1228, 1294 |
| Cfr10I | RCCGGY | 2 cut(s) | 1475, 1752 |
| Cfr13I | GGNCC | 2 cut(s) | 1344, 1521 |
| Cfr42I | CCGCGG | 1 cut(s) | 863 |
| CseI | GACGC | 1 cut(s) | 1468 |
| Csp6I | GTAC | 5 cut(s) | 295, 324, 841, 1532, 1724 |
| CviQI | GTAC | 5 cut(s) | 295, 324, 841, 1532, 1724 |
| DdeI | CTNAG | 5 cut(s) | 408, 417, 1124, 1146, 1229 |
| DpnI | GATC | 6 cut(s) | 174, 854, 890, 1201, 1598, 1692 |
| DpnII | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| DraI | TTTAAA | 1 cut(s) | 1251 |
| DraIII | CACNNNGTG | 1 cut(s) | 517 |
| EaeI | YGGCCR | 2 cut(s) | 519, 1548 |
| EagI | CGGCCG | 1 cut(s) | 1548 |
| Eam1104I | CTCTTC | 2 cut(s) | 36, 78 |
| EarI | CTCTTC | 2 cut(s) | 36, 78 |
| Ecl136II | GAGCTC | 1 cut(s) | 1408 |
| EclXI | CGGCCG | 1 cut(s) | 1548 |
| Eco24I | GRGCYC | 1 cut(s) | 1410 |
| Eco32I | GATATC | 1 cut(s) | 489 |
| Eco47I | GGWCC | 1 cut(s) | 1521 |
| Eco47III | AGCGCT | 2 cut(s) | 268, 1227 |
| Eco52I | CGGCCG | 1 cut(s) | 1548 |
| Eco53kI | GAGCTC | 1 cut(s) | 1408 |
| Eco57I | CTGAAG | 1 cut(s) | 33 |
| Eco88I | CYCGRG | 2 cut(s) | 1242, 1740 |
| EcoICRI | GAGCTC | 1 cut(s) | 1408 |
| EcoRII | CCWGG | 1 cut(s) | 1592 |
| EcoRV | GATATC | 1 cut(s) | 489 |
| EcoT38I | GRGCYC | 1 cut(s) | 1410 |
| FaqI | GGGAC | 1 cut(s) | 1730 |
| FauNDI | CATATG | 1 cut(s) | 1366 |
| FbaI | TGATCA | 1 cut(s) | 888 |
| Fnu4HI | GCNGC | 9 cut(s) | 9, 270, 522, 642, 860, 1362, 1515, 1551, 1761 |
| FokI | GGATG | 4 cut(s) | 958, 982, 1283, 1641 |
| FriOI | GRGCYC | 1 cut(s) | 1410 |
| Fsp4HI | GCNGC | 9 cut(s) | 9, 270, 522, 642, 860, 1362, 1515, 1551, 1761 |
| FspAI | RTGCGCAY | 1 cut(s) | 1293 |
| FspBI | CTAG | 3 cut(s) | 20, 533, 1025 |
| FspI | TGCGCA | 1 cut(s) | 1293 |
| GlaI | GCGC | 3 cut(s) | 268, 1227, 1293 |
| GluI | GCNGC | 9 cut(s) | 9, 270, 522, 642, 860, 1362, 1515, 1551, 1761 |
| GsaI | CCCAGC | 1 cut(s) | 1345 |
| HaeII | RGCGCY | 2 cut(s) | 270, 1229 |
| HaeIII | GGCC | 4 cut(s) | 521, 700, 1346, 1550 |
| HapII | CCGG | 2 cut(s) | 1476, 1753 |
| HgaI | GACGC | 1 cut(s) | 1468 |
| HhaI | GCGC | 3 cut(s) | 269, 1228, 1294 |
| Hin1I | GRCGYC | 1 cut(s) | 1479 |
| Hin6I | GCGC | 3 cut(s) | 267, 1226, 1292 |
| HinP1I | GCGC | 3 cut(s) | 267, 1226, 1292 |
| HinfI | GANTC | 6 cut(s) | 759, 804, 928, 1442, 1654, 1743 |
| HpaII | CCGG | 2 cut(s) | 1476, 1753 |
| HphI | GGTGA | 2 cut(s) | 1117, 1444 |
| Hpy166II | GTNNAC | 3 cut(s) | 511, 1059, 1534 |
| Hpy188III | TCNNGA | 8 cut(s) | 170, 468, 594, 742, 880, 1159, 1658, 1713 |
| Hpy8I | GTNNAC | 3 cut(s) | 511, 1059, 1534 |
| HpyAV | CCTTC | 2 cut(s) | 387, 676 |
| HpyCH4III | ACNGT | 2 cut(s) | 1096, 1531 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 14, 418, 1223, 1464, 1523, 1646 |
| HpyF3I | CTNAG | 5 cut(s) | 408, 417, 1124, 1146, 1229 |
| Hsp92I | GRCGYC | 1 cut(s) | 1479 |
| HspAI | GCGC | 3 cut(s) | 267, 1226, 1292 |
| KpnI | GGTACC | 1 cut(s) | 298 |
| Ksp22I | TGATCA | 1 cut(s) | 888 |
| KspI | CCGCGG | 1 cut(s) | 863 |
| Kzo9I | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| LmnI | GCTCC | 3 cut(s) | 277, 998, 1405 |
| Lsp1109I | GCAGC | 4 cut(s) | 256, 628, 1373, 1501 |
| LweI | GCATC | 4 cut(s) | 653, 936, 1329, 1397 |
| MaeI | CTAG | 3 cut(s) | 20, 533, 1025 |
| MaeIII | GTNAC | 1 cut(s) | 1631 |
| MalI | GATC | 6 cut(s) | 174, 854, 890, 1201, 1598, 1692 |
| MboI | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| MboII | GAAGA | 4 cut(s) | 53, 95, 1315, 1564 |
| MfeI | CAATTG | 1 cut(s) | 1218 |
| MflI | RGATCY | 1 cut(s) | 1199 |
| MhlI | GDGCHC | 2 cut(s) | 513, 1410 |
| MluCI | AATT | 9 cut(s) | 240, 577, 768, 1006, 1032, 1218, 1233, 1425, 1554 |
| MlyI | GAGTC | 2 cut(s) | 813, 1752 |
| MmeI | TCCRAC | 3 cut(s) | 458, 830, 937 |
| MseI | TTAA | 4 cut(s) | 165, 219, 614, 1250 |
| MslI | CAYNNNNRTG | 3 cut(s) | 673, 1508, 1620 |
| MspA1I | CMGCKG | 2 cut(s) | 11, 862 |
| MspI | CCGG | 2 cut(s) | 1476, 1753 |
| MspR9I | CCNGG | 1 cut(s) | 1594 |
| MunI | CAATTG | 1 cut(s) | 1218 |
| Mva1269I | GAATGC | 3 cut(s) | 412, 1137, 1568 |
| MvaI | CCWGG | 1 cut(s) | 1594 |
| MvnI | CGCG | 1 cut(s) | 862 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 14, 418, 1223, 1464, 1523, 1646 |
| NdeI | CATATG | 1 cut(s) | 1366 |
| NdeII | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 296, 1000 |
| NsbI | TGCGCA | 1 cut(s) | 1293 |
| NspI | RCATGY | 2 cut(s) | 1619, 1644 |
| PaeI | GCATGC | 1 cut(s) | 1644 |
| PaeR7I | CTCGAG | 2 cut(s) | 1242, 1740 |
| PagI | TCATGA | 2 cut(s) | 169, 741 |
| PctI | GAATGC | 3 cut(s) | 412, 1137, 1568 |
| PfeI | GAWTC | 4 cut(s) | 759, 928, 1442, 1654 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 942 |
| PkrI | GCNGC | 9 cut(s) | 10, 271, 523, 643, 861, 1363, 1516, 1552, 1762 |
| PleI | GAGTC | 2 cut(s) | 812, 1751 |
| PpsI | GAGTC | 2 cut(s) | 812, 1751 |
| PshBI | ATTAAT | 1 cut(s) | 165 |
| Psp124BI | GAGCTC | 1 cut(s) | 1410 |
| Psp6I | CCWGG | 1 cut(s) | 1592 |
| PspFI | CCCAGC | 1 cut(s) | 1341 |
| PspGI | CCWGG | 1 cut(s) | 1592 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 296, 1000 |
| PspPI | GGNCC | 2 cut(s) | 1344, 1521 |
| PspXI | VCTCGAGB | 2 cut(s) | 1242, 1740 |
| PstI | CTGCAG | 1 cut(s) | 1487 |
| PstNI | CAGNNNCTG | 1 cut(s) | 568 |
| PsuI | RGATCY | 1 cut(s) | 1199 |
| RsaI | GTAC | 5 cut(s) | 296, 325, 842, 1533, 1725 |
| RsaNI | GTAC | 5 cut(s) | 295, 324, 841, 1532, 1724 |
| RseI | CAYNNNNRTG | 3 cut(s) | 673, 1508, 1620 |
| SacI | GAGCTC | 1 cut(s) | 1410 |
| SacII | CCGCGG | 1 cut(s) | 863 |
| SaqAI | TTAA | 4 cut(s) | 165, 219, 614, 1250 |
| SatI | GCNGC | 9 cut(s) | 9, 270, 522, 642, 860, 1362, 1515, 1551, 1761 |
| Sau3AI | GATC | 6 cut(s) | 172, 852, 888, 1199, 1596, 1690 |
| Sau96I | GGNCC | 2 cut(s) | 1344, 1521 |
| SchI | GAGTC | 2 cut(s) | 813, 1752 |
| ScrFI | CCNGG | 1 cut(s) | 1594 |
| SduI | GDGCHC | 2 cut(s) | 513, 1410 |
| SfaNI | GCATC | 4 cut(s) | 653, 936, 1329, 1397 |
| SfcI | CTRYAG | 1 cut(s) | 1483 |
| Sfr274I | CTCGAG | 2 cut(s) | 1242, 1740 |
| Sfr303I | CCGCGG | 1 cut(s) | 863 |
| SgrBI | CCGCGG | 1 cut(s) | 863 |
| SinI | GGWCC | 1 cut(s) | 1521 |
| SlaI | CTCGAG | 2 cut(s) | 1242, 1740 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 673, 1508, 1620 |
| SmlI | CTYRAG | 5 cut(s) | 466, 1168, 1242, 1259, 1740 |
| SmoI | CTYRAG | 5 cut(s) | 466, 1168, 1242, 1259, 1740 |
| SpeI | ACTAGT | 1 cut(s) | 1024 |
| SphI | GCATGC | 1 cut(s) | 1644 |
| Sse9I | AATT | 9 cut(s) | 240, 577, 768, 1006, 1032, 1218, 1233, 1425, 1554 |
| SsiI | CCGC | 6 cut(s) | 9, 522, 860, 862, 1524, 1551 |
| SspI | AATATT | 1 cut(s) | 163 |
| SspMI | CTAG | 3 cut(s) | 20, 533, 1025 |
| SstI | GAGCTC | 1 cut(s) | 1410 |
| StyD4I | CCNGG | 1 cut(s) | 1592 |
| TaaI | ACNGT | 2 cut(s) | 1096, 1531 |
| TaqI | TCGA | 5 cut(s) | 593, 900, 1243, 1714, 1741 |
| TasI | AATT | 9 cut(s) | 240, 577, 768, 1006, 1032, 1218, 1233, 1425, 1554 |
| TatI | WGTACW | 2 cut(s) | 1531, 1723 |
| TauI | GCSGC | 4 cut(s) | 11, 524, 862, 1553 |
| TfiI | GAWTC | 4 cut(s) | 759, 928, 1442, 1654 |
| Tru1I | TTAA | 4 cut(s) | 165, 219, 614, 1250 |
| Tru9I | TTAA | 4 cut(s) | 165, 219, 614, 1250 |
| TscAI | CASTG | 3 cut(s) | 465, 1322, 1492 |
| TseI | GCWGC | 5 cut(s) | 269, 641, 1361, 1514, 1760 |
| TspDTI | ATGAA | 9 cut(s) | 185, 487, 704, 709, 802, 1026, 1267, 1418, 1564 |
| TspGWI | ACGGA | 2 cut(s) | 908, 1551 |
| TspRI | CASTG | 3 cut(s) | 465, 1322, 1492 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 942 |
| VneI | GTGCAC | 1 cut(s) | 509 |
| VpaK11BI | GGWCC | 1 cut(s) | 1521 |
| VspI | ATTAAT | 1 cut(s) | 165 |
| XapI | RAATTY | 3 cut(s) | 577, 1006, 1425 |
| XceI | RCATGY | 2 cut(s) | 1619, 1644 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 796, 1600 |
| XhoI | CTCGAG | 2 cut(s) | 1242, 1740 |
| XspI | CTAG | 3 cut(s) | 20, 533, 1025 |