Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 101 | 3.1e-14 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 282 |
| AcsI | RAATTY | 1 cut(s) | 21 |
| AfaI | GTAC | 2 cut(s) | 102, 379 |
| AflIII | ACRYGT | 1 cut(s) | 253 |
| AluBI | AGCT | 4 cut(s) | 269, 293, 302, 360 |
| AluI | AGCT | 4 cut(s) | 269, 293, 302, 360 |
| Alw26I | GTCTC | 2 cut(s) | 173, 244 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 2 cut(s) | 83, 278 |
| ApoI | RAATTY | 1 cut(s) | 21 |
| AspLEI | GCGC | 1 cut(s) | 283 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 242, 275 |
| BbvCI | CCTCAGC | 1 cut(s) | 168 |
| BbvI | GCAGC | 2 cut(s) | 70, 265 |
| BcoDI | GTCTC | 2 cut(s) | 173, 244 |
| BfaI | CTAG | 2 cut(s) | 290, 299 |
| BisI | GCNGC | 2 cut(s) | 84, 279 |
| BlsI | GCNGC | 2 cut(s) | 85, 280 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| Bpu10I | CCTNAGC | 1 cut(s) | 168 |
| BpuEI | CTTGAG | 1 cut(s) | 268 |
| BsaJI | CCNNGG | 2 cut(s) | 69, 189 |
| Bse1I | ACTGG | 1 cut(s) | 98 |
| BseDI | CCNNGG | 2 cut(s) | 69, 189 |
| BseGI | GGATG | 2 cut(s) | 185, 234 |
| BseMII | CTCAG | 1 cut(s) | 159 |
| BseNI | ACTGG | 1 cut(s) | 98 |
| BseRI | GAGGAG | 1 cut(s) | 191 |
| BseXI | GCAGC | 2 cut(s) | 70, 265 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsmAI | GTCTC | 2 cut(s) | 173, 244 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp19I | CCATGG | 1 cut(s) | 69 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BsrI | ACTGG | 1 cut(s) | 98 |
| BssECI | CCNNGG | 2 cut(s) | 69, 189 |
| BssT1I | CCWWGG | 2 cut(s) | 69, 189 |
| Bst4CI | ACNGT | 1 cut(s) | 105 |
| BstDEI | CTNAG | 1 cut(s) | 168 |
| BstDSI | CCRYGG | 1 cut(s) | 69 |
| BstF5I | GGATG | 2 cut(s) | 185, 234 |
| BstHHI | GCGC | 1 cut(s) | 283 |
| BstMAI | GTCTC | 2 cut(s) | 173, 244 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 80, 164, 275, 299 |
| BstNSI | RCATGY | 1 cut(s) | 257 |
| BstV1I | GCAGC | 2 cut(s) | 70, 265 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtgI | CCRYGG | 1 cut(s) | 69 |
| BtsCI | GGATG | 2 cut(s) | 185, 234 |
| CfoI | GCGC | 1 cut(s) | 283 |
| Csp6I | GTAC | 2 cut(s) | 101, 378 |
| CviAII | CATG | 3 cut(s) | 70, 254, 327 |
| CviQI | GTAC | 2 cut(s) | 101, 378 |
| DdeI | CTNAG | 1 cut(s) | 168 |
| DraI | TTTAAA | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 2 cut(s) | 69, 189 |
| EcoT14I | CCWWGG | 2 cut(s) | 69, 189 |
| ErhI | CCWWGG | 2 cut(s) | 69, 189 |
| FaeI | CATG | 3 cut(s) | 73, 257, 330 |
| FaiI | YATR | 7 cut(s) | 71, 125, 255, 275, 285, 307, 328 |
| FatI | CATG | 3 cut(s) | 69, 253, 326 |
| Fnu4HI | GCNGC | 2 cut(s) | 84, 279 |
| FokI | GGATG | 2 cut(s) | 172, 241 |
| Fsp4HI | GCNGC | 2 cut(s) | 84, 279 |
| FspBI | CTAG | 2 cut(s) | 290, 299 |
| FspI | TGCGCA | 1 cut(s) | 282 |
| GlaI | GCGC | 1 cut(s) | 282 |
| GluI | GCNGC | 2 cut(s) | 84, 279 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HhaI | GCGC | 1 cut(s) | 283 |
| Hin1II | CATG | 3 cut(s) | 73, 257, 330 |
| Hin6I | GCGC | 1 cut(s) | 281 |
| HinP1I | GCGC | 1 cut(s) | 281 |
| HincII | GTYRAC | 1 cut(s) | 37 |
| HindII | GTYRAC | 1 cut(s) | 37 |
| HindIII | AAGCTT | 1 cut(s) | 358 |
| HinfI | GANTC | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 2 cut(s) | 136, 144 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 263 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 105 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 80, 164, 275, 299 |
| HpyF3I | CTNAG | 1 cut(s) | 168 |
| Hsp92II | CATG | 3 cut(s) | 73, 257, 330 |
| HspAI | GCGC | 1 cut(s) | 281 |
| LpnPI | CCDG | 4 cut(s) | 66, 107, 111, 360 |
| Lsp1109I | GCAGC | 2 cut(s) | 70, 265 |
| MaeI | CTAG | 2 cut(s) | 290, 299 |
| MboII | GAAGA | 2 cut(s) | 234, 303 |
| MluCI | AATT | 1 cut(s) | 21 |
| MlyI | GAGTC | 1 cut(s) | 140 |
| MmeI | TCCRAC | 1 cut(s) | 367 |
| MnlI | CCTC | 6 cut(s) | 58, 58, 157, 163, 169, 199 |
| MseI | TTAA | 2 cut(s) | 29, 318 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 80, 164, 275, 299 |
| NcoI | CCATGG | 1 cut(s) | 69 |
| NlaIII | CATG | 3 cut(s) | 73, 257, 330 |
| NsbI | TGCGCA | 1 cut(s) | 282 |
| NspI | RCATGY | 1 cut(s) | 257 |
| PciI | ACATGT | 1 cut(s) | 253 |
| PkrI | GCNGC | 2 cut(s) | 85, 280 |
| PleI | GAGTC | 1 cut(s) | 139 |
| PpsI | GAGTC | 1 cut(s) | 139 |
| PscI | ACATGT | 1 cut(s) | 253 |
| RsaI | GTAC | 2 cut(s) | 102, 379 |
| RsaNI | GTAC | 2 cut(s) | 101, 378 |
| SaqAI | TTAA | 2 cut(s) | 29, 318 |
| SatI | GCNGC | 2 cut(s) | 84, 279 |
| SchI | GAGTC | 1 cut(s) | 140 |
| SetI | ASST | 6 cut(s) | 36, 271, 295, 304, 349, 362 |
| SmlI | CTYRAG | 1 cut(s) | 247 |
| SmoI | CTYRAG | 1 cut(s) | 247 |
| Sse9I | AATT | 1 cut(s) | 21 |
| SspMI | CTAG | 2 cut(s) | 290, 299 |
| StyI | CCWWGG | 2 cut(s) | 69, 189 |
| TaaI | ACNGT | 1 cut(s) | 105 |
| TasI | AATT | 1 cut(s) | 21 |
| TatI | WGTACW | 2 cut(s) | 100, 377 |
| Tru1I | TTAA | 2 cut(s) | 29, 318 |
| Tru9I | TTAA | 2 cut(s) | 29, 318 |
| TseI | GCWGC | 2 cut(s) | 83, 278 |
| TspDTI | ATGAA | 2 cut(s) | 174, 315 |
| XapI | RAATTY | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 257 |
| XspI | CTAG | 2 cut(s) | 290, 299 |