Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 249, 375 |
| AciI | CCGC | 2 cut(s) | 8, 56 |
| AcoI | YGGCCR | 1 cut(s) | 36 |
| AcyI | GRCGYC | 1 cut(s) | 342 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 127 |
| AjnI | CCWGG | 1 cut(s) | 45 |
| Alw26I | GTCTC | 2 cut(s) | 108, 272 |
| AoxI | GGCC | 1 cut(s) | 36 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 1 cut(s) | 35 |
| BalI | TGGCCA | 1 cut(s) | 38 |
| BauI | CACGAG | 1 cut(s) | 86 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BciT130I | CCWGG | 1 cut(s) | 47 |
| BcoDI | GTCTC | 2 cut(s) | 108, 272 |
| BfaI | CTAG | 2 cut(s) | 243, 330 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 1 cut(s) | 47 |
| BmrFI | CCNGG | 1 cut(s) | 47 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BpuEI | CTTGAG | 1 cut(s) | 90 |
| BsaHI | GRCGYC | 1 cut(s) | 342 |
| BsaWI | WCCGGW | 1 cut(s) | 267 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 127 |
| Bse3DI | GCAATG | 1 cut(s) | 324 |
| BseBI | CCWGG | 1 cut(s) | 47 |
| BseGI | GGATG | 2 cut(s) | 304, 319 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BseMI | GCAATG | 1 cut(s) | 324 |
| BseMII | CTCAG | 2 cut(s) | 117, 197 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| BshFI | GGCC | 1 cut(s) | 38 |
| BsiSI | CCGG | 1 cut(s) | 268 |
| BslFI | GGGAC | 1 cut(s) | 334 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BsmAI | GTCTC | 2 cut(s) | 108, 272 |
| BsmFI | GGGAC | 1 cut(s) | 334 |
| BsnI | GGCC | 1 cut(s) | 38 |
| BspACI | CCGC | 2 cut(s) | 8, 56 |
| BspANI | GGCC | 1 cut(s) | 38 |
| BspCNI | CTCAG | 2 cut(s) | 118, 196 |
| BsrDI | GCAATG | 1 cut(s) | 324 |
| BssNI | GRCGYC | 1 cut(s) | 342 |
| BssSI | CACGAG | 1 cut(s) | 86 |
| Bst2BI | CACGAG | 1 cut(s) | 86 |
| Bst2UI | CCWGG | 1 cut(s) | 47 |
| Bst4CI | ACNGT | 1 cut(s) | 215 |
| BstACI | GRCGYC | 1 cut(s) | 342 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 199, 239 |
| BstDEI | CTNAG | 2 cut(s) | 126, 183 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 125 |
| BstF5I | GGATG | 2 cut(s) | 304, 319 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstMAI | GTCTC | 2 cut(s) | 108, 272 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 199, 239 |
| BstNI | CCWGG | 1 cut(s) | 47 |
| BstSCI | CCNGG | 1 cut(s) | 45 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BsuRI | GGCC | 1 cut(s) | 38 |
| BtsCI | GGATG | 2 cut(s) | 304, 319 |
| CfoI | GCGC | 1 cut(s) | 138 |
| CseI | GACGC | 1 cut(s) | 331 |
| CviAII | CATG | 3 cut(s) | 100, 113, 346 |
| CviJI | RGCY | 4 cut(s) | 14, 38, 62, 98 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 38, 62, 98 |
| DdeI | CTNAG | 2 cut(s) | 126, 183 |
| EaeI | YGGCCR | 1 cut(s) | 36 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 125 |
| EcoRII | CCWGG | 1 cut(s) | 45 |
| FaeI | CATG | 3 cut(s) | 103, 116, 349 |
| FaqI | GGGAC | 1 cut(s) | 334 |
| FatI | CATG | 3 cut(s) | 99, 112, 345 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 2 cut(s) | 311, 326 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 2 cut(s) | 243, 330 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 38 |
| HapII | CCGG | 1 cut(s) | 268 |
| HgaI | GACGC | 1 cut(s) | 331 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1I | GRCGYC | 1 cut(s) | 342 |
| Hin1II | CATG | 3 cut(s) | 103, 116, 349 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HinfI | GANTC | 1 cut(s) | 280 |
| HpaII | CCGG | 1 cut(s) | 268 |
| HphI | GGTGA | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 3 cut(s) | 88, 107, 296 |
| Hpy99I | CGWCG | 1 cut(s) | 149 |
| HpyCH4III | ACNGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 361 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 199, 239 |
| HpyF3I | CTNAG | 2 cut(s) | 126, 183 |
| Hsp92I | GRCGYC | 1 cut(s) | 342 |
| Hsp92II | CATG | 3 cut(s) | 103, 116, 349 |
| HspAI | GCGC | 1 cut(s) | 136 |
| LpnPI | CCDG | 6 cut(s) | 9, 32, 59, 281, 297, 374 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| LweI | GCATC | 1 cut(s) | 304 |
| MaeI | CTAG | 2 cut(s) | 243, 330 |
| MaeIII | GTNAC | 1 cut(s) | 320 |
| MlsI | TGGCCA | 1 cut(s) | 38 |
| MluCI | AATT | 2 cut(s) | 65, 370 |
| MluNI | TGGCCA | 1 cut(s) | 38 |
| MlyI | GAGTC | 1 cut(s) | 274 |
| MnlI | CCTC | 6 cut(s) | 4, 52, 121, 304, 326, 364 |
| Mox20I | TGGCCA | 1 cut(s) | 38 |
| MscI | TGGCCA | 1 cut(s) | 38 |
| MseI | TTAA | 1 cut(s) | 369 |
| Msp20I | TGGCCA | 1 cut(s) | 38 |
| MspI | CCGG | 1 cut(s) | 268 |
| MspR9I | CCNGG | 1 cut(s) | 47 |
| MvaI | CCWGG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 199, 239 |
| NlaIII | CATG | 3 cut(s) | 103, 116, 349 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 274 |
| PpsI | GAGTC | 1 cut(s) | 274 |
| PsiI | TTATAA | 2 cut(s) | 249, 375 |
| Psp6I | CCWGG | 1 cut(s) | 45 |
| PspGI | CCWGG | 1 cut(s) | 45 |
| SaqAI | TTAA | 1 cut(s) | 369 |
| SatI | GCNGC | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 274 |
| ScrFI | CCNGG | 1 cut(s) | 47 |
| SetI | ASST | 4 cut(s) | 123, 132, 240, 337 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SmlI | CTYRAG | 1 cut(s) | 105 |
| SmoI | CTYRAG | 1 cut(s) | 105 |
| Sse9I | AATT | 2 cut(s) | 65, 370 |
| SsiI | CCGC | 2 cut(s) | 8, 56 |
| SspMI | CTAG | 2 cut(s) | 243, 330 |
| StyD4I | CCNGG | 1 cut(s) | 45 |
| TaaI | ACNGT | 1 cut(s) | 215 |
| TaqI | TCGA | 1 cut(s) | 144 |
| TasI | AATT | 2 cut(s) | 65, 370 |
| Tru1I | TTAA | 1 cut(s) | 369 |
| Tru9I | TTAA | 1 cut(s) | 369 |
| TseI | GCWGC | 1 cut(s) | 95 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 125 |
| XspI | CTAG | 2 cut(s) | 243, 330 |