Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 25 - 146 | 1.2e-25 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| AccB1I | GGYRCC | 1 cut(s) | 49 |
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AccI | GTMKAC | 2 cut(s) | 86, 389 |
| AciI | CCGC | 2 cut(s) | 127, 138 |
| AcsI | RAATTY | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 53, 99 |
| AgeI | ACCGGT | 1 cut(s) | 33 |
| AgsI | TTSAA | 2 cut(s) | 290, 442 |
| AleI | CACNNNNGTG | 2 cut(s) | 34, 55 |
| AluBI | AGCT | 2 cut(s) | 161, 293 |
| AluI | AGCT | 2 cut(s) | 161, 293 |
| Alw26I | GTCTC | 2 cut(s) | 260, 395 |
| AoxI | GGCC | 1 cut(s) | 207 |
| ApeKI | GCWGC | 7 cut(s) | 10, 104, 107, 152, 155, 158, 161 |
| ApoI | RAATTY | 1 cut(s) | 227 |
| AsiGI | ACCGGT | 1 cut(s) | 33 |
| AspS9I | GGNCC | 2 cut(s) | 39, 208 |
| AsuC2I | CCSGG | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| AvaII | GGWCC | 1 cut(s) | 39 |
| BanI | GGYRCC | 1 cut(s) | 49 |
| BauI | CACGAG | 2 cut(s) | 97, 396 |
| BbvI | GCAGC | 7 cut(s) | 22, 116, 119, 139, 142, 148, 170 |
| BccI | CCATC | 2 cut(s) | 71, 199 |
| BcnI | CCSGG | 1 cut(s) | 54 |
| BcoDI | GTCTC | 2 cut(s) | 260, 395 |
| BfaI | CTAG | 3 cut(s) | 284, 321, 449 |
| BfmI | CTRYAG | 1 cut(s) | 156 |
| BisI | GCNGC | 9 cut(s) | 11, 105, 108, 128, 139, 153, 156, 159, 162 |
| BlsI | GCNGC | 9 cut(s) | 12, 106, 109, 129, 140, 154, 157, 160, 163 |
| Bme1390I | CCNGG | 1 cut(s) | 54 |
| Bme18I | GGWCC | 1 cut(s) | 39 |
| BmgT120I | GGNCC | 2 cut(s) | 39, 208 |
| BmiI | GGNNCC | 1 cut(s) | 51 |
| BmrFI | CCNGG | 1 cut(s) | 54 |
| BmsI | GCATC | 2 cut(s) | 253, 484 |
| BpuMI | CCSGG | 1 cut(s) | 54 |
| BsaBI | GATNNNNATC | 1 cut(s) | 513 |
| BsaJI | CCNNGG | 1 cut(s) | 53 |
| BsaWI | WCCGGW | 1 cut(s) | 33 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 53, 99 |
| Bse118I | RCCGGY | 2 cut(s) | 33, 46 |
| Bse3DI | GCAATG | 1 cut(s) | 25 |
| Bse8I | GATNNNNATC | 1 cut(s) | 513 |
| BseDI | CCNNGG | 1 cut(s) | 53 |
| BseGI | GGATG | 1 cut(s) | 499 |
| BseJI | GATNNNNATC | 1 cut(s) | 513 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 53, 99 |
| BseMI | GCAATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 517 |
| BseRI | GAGGAG | 2 cut(s) | 384, 491 |
| BseXI | GCAGC | 7 cut(s) | 22, 116, 119, 139, 142, 148, 170 |
| BshFI | GGCC | 1 cut(s) | 209 |
| BshNI | GGYRCC | 1 cut(s) | 49 |
| BshTI | ACCGGT | 1 cut(s) | 33 |
| BsiSI | CCGG | 3 cut(s) | 34, 47, 53 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 53, 99 |
| BsmAI | GTCTC | 2 cut(s) | 260, 395 |
| BsmBI | CGTCTC | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 209 |
| BspACI | CCGC | 2 cut(s) | 127, 138 |
| BspANI | GGCC | 1 cut(s) | 209 |
| BspCNI | CTCAG | 1 cut(s) | 516 |
| BspHI | TCATGA | 1 cut(s) | 247 |
| BspLI | GGNNCC | 1 cut(s) | 51 |
| BspMAI | CTGCAG | 1 cut(s) | 160 |
| BspT107I | GGYRCC | 1 cut(s) | 49 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BsrDI | GCAATG | 1 cut(s) | 25 |
| BsrFI | RCCGGY | 2 cut(s) | 33, 46 |
| BssAI | RCCGGY | 2 cut(s) | 33, 46 |
| BssECI | CCNNGG | 1 cut(s) | 53 |
| BssNAI | GTATAC | 2 cut(s) | 87, 390 |
| BssSI | CACGAG | 2 cut(s) | 97, 396 |
| Bst1107I | GTATAC | 2 cut(s) | 87, 390 |
| Bst2BI | CACGAG | 2 cut(s) | 97, 396 |
| Bst6I | CTCTTC | 1 cut(s) | 213 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 434 |
| BstDEI | CTNAG | 3 cut(s) | 170, 337, 503 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 97 |
| BstF5I | GGATG | 1 cut(s) | 499 |
| BstMAI | GTCTC | 2 cut(s) | 260, 395 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 161, 434 |
| BstNSI | RCATGY | 1 cut(s) | 437 |
| BstSCI | CCNGG | 1 cut(s) | 52 |
| BstSFI | CTRYAG | 1 cut(s) | 156 |
| BstV1I | GCAGC | 7 cut(s) | 22, 116, 119, 139, 142, 148, 170 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 77 |
| BstZ17I | GTATAC | 2 cut(s) | 87, 390 |
| BsuRI | GGCC | 1 cut(s) | 209 |
| BtsCI | GGATG | 1 cut(s) | 499 |
| BtsIMutI | CAGTG | 2 cut(s) | 72, 511 |
| CciI | TCATGA | 1 cut(s) | 247 |
| Cfr10I | RCCGGY | 2 cut(s) | 33, 46 |
| Cfr13I | GGNCC | 2 cut(s) | 39, 208 |
| CspAI | ACCGGT | 1 cut(s) | 33 |
| CviAII | CATG | 2 cut(s) | 248, 434 |
| CviJI | RGCY | 6 cut(s) | 92, 152, 161, 209, 293, 456 |
| CviKI_1 | RGCY | 6 cut(s) | 92, 152, 161, 209, 293, 456 |
| DdeI | CTNAG | 3 cut(s) | 170, 337, 503 |
| DraI | TTTAAA | 1 cut(s) | 379 |
| Eam1104I | CTCTTC | 1 cut(s) | 213 |
| EarI | CTCTTC | 1 cut(s) | 213 |
| Eco47I | GGWCC | 1 cut(s) | 39 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 97 |
| Esp3I | CGTCTC | 1 cut(s) | 260 |
| FaeI | CATG | 2 cut(s) | 251, 437 |
| FaiI | YATR | 9 cut(s) | 87, 195, 249, 390, 420, 435, 463, 488, 513 |
| FatI | CATG | 2 cut(s) | 247, 433 |
| FblI | GTMKAC | 2 cut(s) | 86, 389 |
| Fnu4HI | GCNGC | 9 cut(s) | 11, 105, 108, 128, 139, 153, 156, 159, 162 |
| FokI | GGATG | 1 cut(s) | 506 |
| Fsp4HI | GCNGC | 9 cut(s) | 11, 105, 108, 128, 139, 153, 156, 159, 162 |
| FspBI | CTAG | 3 cut(s) | 284, 321, 449 |
| GluI | GCNGC | 9 cut(s) | 11, 105, 108, 128, 139, 153, 156, 159, 162 |
| HaeIII | GGCC | 1 cut(s) | 209 |
| HapII | CCGG | 3 cut(s) | 34, 47, 53 |
| Hin1II | CATG | 2 cut(s) | 251, 437 |
| HpaII | CCGG | 3 cut(s) | 34, 47, 53 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 3 cut(s) | 87, 278, 390 |
| Hpy188III | TCNNGA | 3 cut(s) | 248, 398, 479 |
| Hpy8I | GTNNAC | 3 cut(s) | 87, 278, 390 |
| Hpy99I | CGWCG | 1 cut(s) | 366 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 3 cut(s) | 158, 244, 299 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 161, 434 |
| HpyF3I | CTNAG | 3 cut(s) | 170, 337, 503 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92II | CATG | 2 cut(s) | 251, 437 |
| LmnI | GCTCC | 2 cut(s) | 169, 481 |
| LpnPI | CCDG | 3 cut(s) | 47, 60, 66 |
| Lsp1109I | GCAGC | 7 cut(s) | 22, 116, 119, 139, 142, 148, 170 |
| LweI | GCATC | 2 cut(s) | 253, 484 |
| MaeI | CTAG | 3 cut(s) | 284, 321, 449 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MaeIII | GTNAC | 1 cut(s) | 27 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MboII | GAAGA | 1 cut(s) | 230 |
| MluCI | AATT | 2 cut(s) | 227, 421 |
| MnlI | CCTC | 6 cut(s) | 93, 103, 298, 405, 509, 512 |
| MseI | TTAA | 1 cut(s) | 378 |
| MslI | CAYNNNNRTG | 3 cut(s) | 34, 55, 75 |
| MspA1I | CMGCKG | 1 cut(s) | 161 |
| MspI | CCGG | 3 cut(s) | 34, 47, 53 |
| MspR9I | CCNGG | 1 cut(s) | 54 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 161, 434 |
| NciI | CCSGG | 1 cut(s) | 54 |
| NlaIII | CATG | 2 cut(s) | 251, 437 |
| NlaIV | GGNNCC | 1 cut(s) | 51 |
| NmuCI | GTSAC | 1 cut(s) | 27 |
| NspI | RCATGY | 1 cut(s) | 437 |
| OliI | CACNNNNGTG | 2 cut(s) | 34, 55 |
| PagI | TCATGA | 1 cut(s) | 247 |
| PinAI | ACCGGT | 1 cut(s) | 33 |
| PkrI | GCNGC | 9 cut(s) | 12, 106, 109, 129, 140, 154, 157, 160, 163 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| PspN4I | GGNNCC | 1 cut(s) | 51 |
| PspPI | GGNCC | 2 cut(s) | 39, 208 |
| PstI | CTGCAG | 1 cut(s) | 160 |
| PvuII | CAGCTG | 1 cut(s) | 161 |
| RseI | CAYNNNNRTG | 3 cut(s) | 34, 55, 75 |
| SaqAI | TTAA | 1 cut(s) | 378 |
| SatI | GCNGC | 9 cut(s) | 11, 105, 108, 128, 139, 153, 156, 159, 162 |
| Sau96I | GGNCC | 2 cut(s) | 39, 208 |
| ScrFI | CCNGG | 1 cut(s) | 54 |
| SetI | ASST | 5 cut(s) | 163, 242, 295, 364, 372 |
| SfaNI | GCATC | 2 cut(s) | 253, 484 |
| SfcI | CTRYAG | 1 cut(s) | 156 |
| SgrAI | CRCCGGYG | 1 cut(s) | 33 |
| SinI | GGWCC | 1 cut(s) | 39 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 34, 55, 75 |
| Sse9I | AATT | 2 cut(s) | 227, 421 |
| SsiI | CCGC | 2 cut(s) | 127, 138 |
| SspMI | CTAG | 3 cut(s) | 284, 321, 449 |
| StyD4I | CCNGG | 1 cut(s) | 52 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TasI | AATT | 2 cut(s) | 227, 421 |
| TauI | GCSGC | 2 cut(s) | 130, 141 |
| Tru1I | TTAA | 1 cut(s) | 378 |
| Tru9I | TTAA | 1 cut(s) | 378 |
| TscAI | CASTG | 2 cut(s) | 79, 511 |
| TseFI | GTSAC | 1 cut(s) | 27 |
| TseI | GCWGC | 7 cut(s) | 10, 104, 107, 152, 155, 158, 161 |
| Tsp45I | GTSAC | 1 cut(s) | 27 |
| TspDTI | ATGAA | 2 cut(s) | 239, 357 |
| TspGWI | ACGGA | 1 cut(s) | 284 |
| TspRI | CASTG | 2 cut(s) | 79, 511 |
| VpaK11BI | GGWCC | 1 cut(s) | 39 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 97 |
| XapI | RAATTY | 1 cut(s) | 227 |
| XceI | RCATGY | 1 cut(s) | 437 |
| XmiI | GTMKAC | 2 cut(s) | 86, 389 |
| XspI | CTAG | 3 cut(s) | 284, 321, 449 |