Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 91 |
| AfaI | GTAC | 1 cut(s) | 181 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 291 |
| AflIII | ACRYGT | 1 cut(s) | 127 |
| AgeI | ACCGGT | 1 cut(s) | 159 |
| AgsI | TTSAA | 1 cut(s) | 245 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 280 |
| AluBI | AGCT | 1 cut(s) | 190 |
| AluI | AGCT | 1 cut(s) | 190 |
| Ama87I | CYCGRG | 1 cut(s) | 264 |
| AsiGI | ACCGGT | 1 cut(s) | 159 |
| AsuHPI | GGTGA | 3 cut(s) | 20, 59, 149 |
| AvaI | CYCGRG | 1 cut(s) | 264 |
| BauI | CACGAG | 1 cut(s) | 289 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 242 |
| BfaI | CTAG | 3 cut(s) | 77, 177, 260 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 280 |
| BmeT110I | CYCGRG | 1 cut(s) | 264 |
| BmsI | GCATC | 1 cut(s) | 12 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 265 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 291 |
| Bse118I | RCCGGY | 1 cut(s) | 159 |
| BseDI | CCNNGG | 1 cut(s) | 265 |
| BseGI | GGATG | 5 cut(s) | 182, 199, 214, 238, 257 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 291 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BshTI | ACCGGT | 1 cut(s) | 159 |
| BsiHKCI | CYCGRG | 1 cut(s) | 264 |
| BsiSI | CCGG | 1 cut(s) | 160 |
| BslFI | GGGAC | 1 cut(s) | 268 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 291 |
| BsmFI | GGGAC | 1 cut(s) | 268 |
| BsoBI | CYCGRG | 1 cut(s) | 264 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BsrFI | RCCGGY | 1 cut(s) | 159 |
| BssAI | RCCGGY | 1 cut(s) | 159 |
| BssECI | CCNNGG | 1 cut(s) | 265 |
| BssSI | CACGAG | 1 cut(s) | 289 |
| Bst2BI | CACGAG | 1 cut(s) | 289 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 2 cut(s) | 60, 122 |
| BstF5I | GGATG | 5 cut(s) | 182, 199, 214, 238, 257 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstNSI | RCATGY | 1 cut(s) | 131 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BtsCI | GGATG | 5 cut(s) | 182, 199, 214, 238, 257 |
| Cfr10I | RCCGGY | 1 cut(s) | 159 |
| Csp6I | GTAC | 1 cut(s) | 180 |
| CspAI | ACCGGT | 1 cut(s) | 159 |
| CviAII | CATG | 1 cut(s) | 128 |
| CviJI | RGCY | 2 cut(s) | 190, 263 |
| CviKI_1 | RGCY | 2 cut(s) | 190, 263 |
| CviQI | GTAC | 1 cut(s) | 180 |
| DdeI | CTNAG | 2 cut(s) | 60, 122 |
| DriI | GACNNNNNGTC | 1 cut(s) | 280 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 280 |
| Eco88I | CYCGRG | 1 cut(s) | 264 |
| FaeI | CATG | 1 cut(s) | 131 |
| FaiI | YATR | 4 cut(s) | 129, 272, 281, 301 |
| FaqI | GGGAC | 1 cut(s) | 268 |
| FatI | CATG | 1 cut(s) | 127 |
| FokI | GGATG | 5 cut(s) | 169, 206, 221, 245, 264 |
| FspBI | CTAG | 3 cut(s) | 77, 177, 260 |
| HapII | CCGG | 1 cut(s) | 160 |
| Hin1II | CATG | 1 cut(s) | 131 |
| HinfI | GANTC | 1 cut(s) | 275 |
| HpaII | CCGG | 1 cut(s) | 160 |
| HphI | GGTGA | 3 cut(s) | 20, 59, 149 |
| Hpy166II | GTNNAC | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 2 cut(s) | 218, 230 |
| Hpy8I | GTNNAC | 1 cut(s) | 89 |
| HpyAV | CCTTC | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4IV | ACGT | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 1 cut(s) | 100 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 122 |
| HpySE526I | ACGT | 1 cut(s) | 91 |
| Hsp92II | CATG | 1 cut(s) | 131 |
| LpnPI | CCDG | 4 cut(s) | 173, 176, 215, 231 |
| LweI | GCATC | 1 cut(s) | 12 |
| MaeI | CTAG | 3 cut(s) | 77, 177, 260 |
| MaeII | ACGT | 1 cut(s) | 91 |
| MaeIII | GTNAC | 1 cut(s) | 8 |
| MboII | GAAGA | 3 cut(s) | 62, 110, 257 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MnlI | CCTC | 3 cut(s) | 55, 260, 298 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NlaIII | CATG | 1 cut(s) | 131 |
| NmuCI | GTSAC | 1 cut(s) | 8 |
| NspI | RCATGY | 1 cut(s) | 131 |
| PciI | ACATGT | 1 cut(s) | 127 |
| PinAI | ACCGGT | 1 cut(s) | 159 |
| PleI | GAGTC | 1 cut(s) | 269 |
| PpsI | GAGTC | 1 cut(s) | 269 |
| PscI | ACATGT | 1 cut(s) | 127 |
| Psp1406I | AACGTT | 1 cut(s) | 91 |
| RsaI | GTAC | 1 cut(s) | 181 |
| RsaNI | GTAC | 1 cut(s) | 180 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| SchI | GAGTC | 1 cut(s) | 269 |
| SetI | ASST | 6 cut(s) | 10, 49, 66, 94, 192, 271 |
| SfaNI | GCATC | 1 cut(s) | 12 |
| SspMI | CTAG | 3 cut(s) | 77, 177, 260 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TaiI | ACGT | 1 cut(s) | 94 |
| TatI | WGTACW | 1 cut(s) | 179 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| TseFI | GTSAC | 1 cut(s) | 8 |
| Tsp45I | GTSAC | 1 cut(s) | 8 |
| XceI | RCATGY | 1 cut(s) | 131 |
| XspI | CTAG | 3 cut(s) | 77, 177, 260 |