Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 472 |
| AccBSI | CCGCTC | 1 cut(s) | 97 |
| AciI | CCGC | 2 cut(s) | 97, 644 |
| AclWI | GGATC | 3 cut(s) | 652, 660, 734 |
| AcoI | YGGCCR | 1 cut(s) | 756 |
| AcsI | RAATTY | 3 cut(s) | 277, 702, 838 |
| AfaI | GTAC | 2 cut(s) | 362, 679 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 96, 554, 815 |
| AgsI | TTSAA | 3 cut(s) | 55, 150, 467 |
| AjnI | CCWGG | 1 cut(s) | 879 |
| AluBI | AGCT | 4 cut(s) | 127, 571, 583, 788 |
| AluI | AGCT | 4 cut(s) | 127, 571, 583, 788 |
| Alw26I | GTCTC | 2 cut(s) | 181, 691 |
| AlwI | GGATC | 3 cut(s) | 652, 660, 734 |
| AoxI | GGCC | 1 cut(s) | 756 |
| ApoI | RAATTY | 3 cut(s) | 277, 702, 838 |
| AseI | ATTAAT | 1 cut(s) | 588 |
| AspS9I | GGNCC | 1 cut(s) | 610 |
| AsuHPI | GGTGA | 3 cut(s) | 537, 704, 724 |
| AvaII | GGWCC | 1 cut(s) | 610 |
| BalI | TGGCCA | 1 cut(s) | 758 |
| BccI | CCATC | 5 cut(s) | 251, 471, 600, 828, 857 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 27 |
| BciT130I | CCWGG | 1 cut(s) | 881 |
| BclI | TGATCA | 1 cut(s) | 181 |
| BcoDI | GTCTC | 2 cut(s) | 181, 691 |
| BfaI | CTAG | 4 cut(s) | 171, 600, 681, 785 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BfuAI | ACCTGC | 1 cut(s) | 472 |
| BglII | AGATCT | 1 cut(s) | 224 |
| BisI | GCNGC | 1 cut(s) | 98 |
| BlpI | GCTNAGC | 1 cut(s) | 309 |
| BlsI | GCNGC | 1 cut(s) | 99 |
| BmcAI | AGTACT | 1 cut(s) | 679 |
| Bme1390I | CCNGG | 1 cut(s) | 881 |
| Bme18I | GGWCC | 1 cut(s) | 610 |
| BmgT120I | GGNCC | 1 cut(s) | 610 |
| BmiI | GGNNCC | 1 cut(s) | 611 |
| BmrFI | CCNGG | 1 cut(s) | 881 |
| BmsI | GCATC | 2 cut(s) | 524, 550 |
| BpmI | CTGGAG | 1 cut(s) | 241 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 309 |
| BsaJI | CCNNGG | 5 cut(s) | 90, 661, 771, 879, 880 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 96, 554, 815 |
| Bse1I | ACTGG | 2 cut(s) | 224, 820 |
| BseBI | CCWGG | 1 cut(s) | 881 |
| BseDI | CCNNGG | 5 cut(s) | 90, 661, 771, 879, 880 |
| BseGI | GGATG | 2 cut(s) | 166, 262 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 96, 554, 815 |
| BseMII | CTCAG | 5 cut(s) | 368, 416, 464, 570, 702 |
| BseNI | ACTGG | 2 cut(s) | 224, 820 |
| BseYI | CCCAGC | 1 cut(s) | 567 |
| Bsh1285I | CGRYCG | 1 cut(s) | 648 |
| BshFI | GGCC | 1 cut(s) | 758 |
| BsiEI | CGRYCG | 1 cut(s) | 648 |
| BslFI | GGGAC | 2 cut(s) | 424, 623 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 96, 554, 815 |
| BsmAI | GTCTC | 2 cut(s) | 181, 691 |
| BsmFI | GGGAC | 2 cut(s) | 424, 623 |
| BsnI | GGCC | 1 cut(s) | 758 |
| Bsp1407I | TGTACA | 1 cut(s) | 360 |
| Bsp143I | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 309 |
| BspACI | CCGC | 2 cut(s) | 97, 644 |
| BspANI | GGCC | 1 cut(s) | 758 |
| BspCNI | CTCAG | 5 cut(s) | 367, 415, 465, 571, 701 |
| BspLI | GGNNCC | 1 cut(s) | 611 |
| BspMI | ACCTGC | 1 cut(s) | 472 |
| BspPI | GGATC | 3 cut(s) | 652, 660, 734 |
| BsrBI | CCGCTC | 1 cut(s) | 97 |
| BsrGI | TGTACA | 1 cut(s) | 360 |
| BsrI | ACTGG | 2 cut(s) | 224, 820 |
| BssECI | CCNNGG | 5 cut(s) | 90, 661, 771, 879, 880 |
| BssMI | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| BssT1I | CCWWGG | 3 cut(s) | 90, 661, 771 |
| Bst2UI | CCWGG | 1 cut(s) | 881 |
| BstAUI | TGTACA | 1 cut(s) | 360 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 642 |
| BstDEI | CTNAG | 7 cut(s) | 309, 354, 402, 473, 579, 688, 843 |
| BstF5I | GGATG | 2 cut(s) | 166, 262 |
| BstKTI | GATC | 6 cut(s) | 82, 184, 227, 655, 660, 729 |
| BstMAI | GTCTC | 2 cut(s) | 181, 691 |
| BstMBI | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| BstMCI | CGRYCG | 1 cut(s) | 648 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 319, 478 |
| BstNI | CCWGG | 1 cut(s) | 881 |
| BstNSI | RCATGY | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 879 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BstX2I | RGATCY | 3 cut(s) | 224, 652, 726 |
| BstYI | RGATCY | 3 cut(s) | 224, 652, 726 |
| BsuRI | GGCC | 1 cut(s) | 758 |
| BtgZI | GCGATG | 1 cut(s) | 573 |
| BtsCI | GGATG | 2 cut(s) | 166, 262 |
| BtsI | GCAGTG | 1 cut(s) | 709 |
| BtsIMutI | CAGTG | 1 cut(s) | 709 |
| BveI | ACCTGC | 1 cut(s) | 472 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 642 |
| Cfr13I | GGNCC | 1 cut(s) | 610 |
| Csp6I | GTAC | 2 cut(s) | 361, 678 |
| CviAII | CATG | 2 cut(s) | 136, 752 |
| CviQI | GTAC | 2 cut(s) | 361, 678 |
| DdeI | CTNAG | 7 cut(s) | 309, 354, 402, 473, 579, 688, 843 |
| DpnI | GATC | 6 cut(s) | 81, 183, 226, 654, 659, 728 |
| DpnII | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| DraI | TTTAAA | 1 cut(s) | 274 |
| EaeI | YGGCCR | 1 cut(s) | 756 |
| Eco130I | CCWWGG | 3 cut(s) | 90, 661, 771 |
| Eco47I | GGWCC | 1 cut(s) | 610 |
| EcoRI | GAATTC | 1 cut(s) | 838 |
| EcoRII | CCWGG | 1 cut(s) | 879 |
| EcoT14I | CCWWGG | 3 cut(s) | 90, 661, 771 |
| ErhI | CCWWGG | 3 cut(s) | 90, 661, 771 |
| FaeI | CATG | 2 cut(s) | 139, 755 |
| FaiI | YATR | 9 cut(s) | 47, 137, 186, 210, 524, 526, 748, 753, 813 |
| FaqI | GGGAC | 2 cut(s) | 424, 623 |
| FatI | CATG | 2 cut(s) | 135, 751 |
| FbaI | TGATCA | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 1 cut(s) | 98 |
| FokI | GGATG | 2 cut(s) | 153, 269 |
| Fsp4HI | GCNGC | 1 cut(s) | 98 |
| FspBI | CTAG | 4 cut(s) | 171, 600, 681, 785 |
| GluI | GCNGC | 1 cut(s) | 98 |
| GsaI | CCCAGC | 1 cut(s) | 571 |
| GsuI | CTGGAG | 1 cut(s) | 241 |
| HaeIII | GGCC | 1 cut(s) | 758 |
| Hin1II | CATG | 2 cut(s) | 139, 755 |
| HinfI | GANTC | 3 cut(s) | 51, 514, 684 |
| HphI | GGTGA | 3 cut(s) | 537, 704, 724 |
| Hpy166II | GTNNAC | 1 cut(s) | 69 |
| Hpy188I | TCNGA | 5 cut(s) | 79, 87, 181, 580, 657 |
| Hpy188III | TCNNGA | 4 cut(s) | 14, 115, 443, 518 |
| Hpy8I | GTNNAC | 1 cut(s) | 69 |
| HpyAV | CCTTC | 3 cut(s) | 429, 549, 820 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 283, 746 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 319, 478 |
| HpyF3I | CTNAG | 7 cut(s) | 309, 354, 402, 473, 579, 688, 843 |
| Hsp92II | CATG | 2 cut(s) | 139, 755 |
| Ksp22I | TGATCA | 1 cut(s) | 181 |
| Kzo9I | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| LmnI | GCTCC | 3 cut(s) | 38, 94, 793 |
| LweI | GCATC | 2 cut(s) | 524, 550 |
| MaeI | CTAG | 4 cut(s) | 171, 600, 681, 785 |
| MalI | GATC | 6 cut(s) | 81, 183, 226, 654, 659, 728 |
| MbiI | CCGCTC | 1 cut(s) | 97 |
| MboI | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| MboII | GAAGA | 5 cut(s) | 155, 336, 534, 615, 721 |
| MflI | RGATCY | 3 cut(s) | 224, 652, 726 |
| MlsI | TGGCCA | 1 cut(s) | 758 |
| MluCI | AATT | 5 cut(s) | 277, 501, 620, 702, 838 |
| MluNI | TGGCCA | 1 cut(s) | 758 |
| MlyI | GAGTC | 1 cut(s) | 693 |
| MmeI | TCCRAC | 2 cut(s) | 21, 815 |
| MnlI | CCTC | 6 cut(s) | 10, 122, 125, 201, 558, 819 |
| Mox20I | TGGCCA | 1 cut(s) | 758 |
| MscI | TGGCCA | 1 cut(s) | 758 |
| MseI | TTAA | 5 cut(s) | 201, 273, 291, 396, 588 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| Msp20I | TGGCCA | 1 cut(s) | 758 |
| MspA1I | CMGCKG | 1 cut(s) | 644 |
| MspR9I | CCNGG | 1 cut(s) | 881 |
| MvaI | CCWGG | 1 cut(s) | 881 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 319, 478 |
| NdeII | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| NlaIII | CATG | 2 cut(s) | 139, 755 |
| NlaIV | GGNNCC | 1 cut(s) | 611 |
| NspI | RCATGY | 1 cut(s) | 139 |
| PasI | CCCWGGG | 1 cut(s) | 880 |
| PfeI | GAWTC | 2 cut(s) | 51, 514 |
| PkrI | GCNGC | 1 cut(s) | 99 |
| PleI | GAGTC | 1 cut(s) | 692 |
| PpsI | GAGTC | 1 cut(s) | 692 |
| PshBI | ATTAAT | 1 cut(s) | 588 |
| Psp6I | CCWGG | 1 cut(s) | 879 |
| PspFI | CCCAGC | 1 cut(s) | 567 |
| PspGI | CCWGG | 1 cut(s) | 879 |
| PspN4I | GGNNCC | 1 cut(s) | 611 |
| PspPI | GGNCC | 1 cut(s) | 610 |
| PsuI | RGATCY | 3 cut(s) | 224, 652, 726 |
| RsaI | GTAC | 2 cut(s) | 362, 679 |
| RsaNI | GTAC | 2 cut(s) | 361, 678 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SaqAI | TTAA | 5 cut(s) | 201, 273, 291, 396, 588 |
| SatI | GCNGC | 1 cut(s) | 98 |
| Sau3AI | GATC | 6 cut(s) | 79, 181, 224, 652, 657, 726 |
| Sau96I | GGNCC | 1 cut(s) | 610 |
| ScaI | AGTACT | 1 cut(s) | 679 |
| SchI | GAGTC | 1 cut(s) | 693 |
| ScrFI | CCNGG | 1 cut(s) | 881 |
| SetI | ASST | 9 cut(s) | 129, 319, 339, 486, 550, 573, 585, 694, 790 |
| SfaNI | GCATC | 2 cut(s) | 524, 550 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| SinI | GGWCC | 1 cut(s) | 610 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| Sse9I | AATT | 5 cut(s) | 277, 501, 620, 702, 838 |
| SsiI | CCGC | 2 cut(s) | 97, 644 |
| SspMI | CTAG | 4 cut(s) | 171, 600, 681, 785 |
| StyD4I | CCNGG | 1 cut(s) | 879 |
| StyI | CCWWGG | 3 cut(s) | 90, 661, 771 |
| TaqI | TCGA | 1 cut(s) | 347 |
| TasI | AATT | 5 cut(s) | 277, 501, 620, 702, 838 |
| TatI | WGTACW | 2 cut(s) | 360, 677 |
| TauI | GCSGC | 1 cut(s) | 100 |
| TfiI | GAWTC | 2 cut(s) | 51, 514 |
| Tru1I | TTAA | 5 cut(s) | 201, 273, 291, 396, 588 |
| Tru9I | TTAA | 5 cut(s) | 201, 273, 291, 396, 588 |
| TscAI | CASTG | 1 cut(s) | 716 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| TspGWI | ACGGA | 1 cut(s) | 54 |
| TspRI | CASTG | 1 cut(s) | 716 |
| VpaK11BI | GGWCC | 1 cut(s) | 610 |
| VspI | ATTAAT | 1 cut(s) | 588 |
| XapI | RAATTY | 3 cut(s) | 277, 702, 838 |
| XceI | RCATGY | 1 cut(s) | 139 |
| XspI | CTAG | 4 cut(s) | 171, 600, 681, 785 |
| ZrmI | AGTACT | 1 cut(s) | 679 |