Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 7 - 98 | 9.9e-16 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 229, 350 |
| AfaI | GTAC | 1 cut(s) | 357 |
| AgsI | TTSAA | 2 cut(s) | 119, 139 |
| AluBI | AGCT | 4 cut(s) | 158, 179, 272, 287 |
| AluI | AGCT | 4 cut(s) | 158, 179, 272, 287 |
| ApeKI | GCWGC | 1 cut(s) | 284 |
| ApoI | RAATTY | 2 cut(s) | 229, 350 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 261, 293 |
| BbvI | GCAGC | 1 cut(s) | 296 |
| BfaI | CTAG | 4 cut(s) | 159, 249, 281, 308 |
| BisI | GCNGC | 1 cut(s) | 285 |
| BlsI | GCNGC | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseXI | GCAGC | 1 cut(s) | 296 |
| BsgI | GTGCAG | 1 cut(s) | 282 |
| Bsp143I | GATC | 1 cut(s) | 304 |
| BssMI | GATC | 1 cut(s) | 304 |
| Bst4CI | ACNGT | 1 cut(s) | 128 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 290 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstKTI | GATC | 1 cut(s) | 307 |
| BstMBI | GATC | 1 cut(s) | 304 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 290 |
| BstNSI | RCATGY | 1 cut(s) | 50 |
| BstV1I | GCAGC | 1 cut(s) | 296 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| BtsIMutI | CAGTG | 1 cut(s) | 211 |
| Csp6I | GTAC | 1 cut(s) | 356 |
| CviAII | CATG | 4 cut(s) | 47, 245, 290, 302 |
| CviJI | RGCY | 8 cut(s) | 62, 158, 179, 190, 218, 260, 272, 287 |
| CviKI_1 | RGCY | 8 cut(s) | 62, 158, 179, 190, 218, 260, 272, 287 |
| CviQI | GTAC | 1 cut(s) | 356 |
| DpnI | GATC | 1 cut(s) | 306 |
| DpnII | GATC | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| Eco32I | GATATC | 1 cut(s) | 202 |
| EcoRV | GATATC | 1 cut(s) | 202 |
| FaeI | CATG | 4 cut(s) | 50, 248, 293, 305 |
| FaiI | YATR | 7 cut(s) | 30, 48, 195, 246, 291, 303, 326 |
| FatI | CATG | 4 cut(s) | 46, 244, 289, 301 |
| Fnu4HI | GCNGC | 1 cut(s) | 285 |
| FokI | GGATG | 1 cut(s) | 90 |
| Fsp4HI | GCNGC | 1 cut(s) | 285 |
| FspBI | CTAG | 4 cut(s) | 159, 249, 281, 308 |
| GluI | GCNGC | 1 cut(s) | 285 |
| Hin1II | CATG | 4 cut(s) | 50, 248, 293, 305 |
| Hpy188III | TCNNGA | 1 cut(s) | 308 |
| HpyCH4III | ACNGT | 1 cut(s) | 128 |
| HpyCH4V | TGCA | 2 cut(s) | 50, 299 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 290 |
| Hsp92II | CATG | 4 cut(s) | 50, 248, 293, 305 |
| Kzo9I | GATC | 1 cut(s) | 304 |
| LpnPI | CCDG | 1 cut(s) | 120 |
| Lsp1109I | GCAGC | 1 cut(s) | 296 |
| MaeI | CTAG | 4 cut(s) | 159, 249, 281, 308 |
| MalI | GATC | 1 cut(s) | 306 |
| MboI | GATC | 1 cut(s) | 304 |
| MboII | GAAGA | 3 cut(s) | 221, 269, 356 |
| MfeI | CAATTG | 1 cut(s) | 146 |
| MluCI | AATT | 3 cut(s) | 146, 229, 350 |
| MnlI | CCTC | 2 cut(s) | 64, 246 |
| MunI | CAATTG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 290 |
| NdeII | GATC | 1 cut(s) | 304 |
| NlaIII | CATG | 4 cut(s) | 50, 248, 293, 305 |
| NspI | RCATGY | 1 cut(s) | 50 |
| PkrI | GCNGC | 1 cut(s) | 286 |
| RsaI | GTAC | 1 cut(s) | 357 |
| RsaNI | GTAC | 1 cut(s) | 356 |
| SatI | GCNGC | 1 cut(s) | 285 |
| Sau3AI | GATC | 1 cut(s) | 304 |
| SetI | ASST | 6 cut(s) | 75, 160, 181, 270, 274, 289 |
| Sse9I | AATT | 3 cut(s) | 146, 229, 350 |
| SspMI | CTAG | 4 cut(s) | 159, 249, 281, 308 |
| TaaI | ACNGT | 1 cut(s) | 128 |
| TasI | AATT | 3 cut(s) | 146, 229, 350 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TseI | GCWGC | 1 cut(s) | 284 |
| TspDTI | ATGAA | 2 cut(s) | 233, 357 |
| TspRI | CASTG | 1 cut(s) | 211 |
| XapI | RAATTY | 2 cut(s) | 229, 350 |
| XbaI | TCTAGA | 1 cut(s) | 307 |
| XceI | RCATGY | 1 cut(s) | 50 |
| XspI | CTAG | 4 cut(s) | 159, 249, 281, 308 |