ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 437 |
| Acc36I | ACCTGC | 2 cut(s) | 338, 437 |
| AccB1I | GGYRCC | 1 cut(s) | 374 |
| AcsI | RAATTY | 1 cut(s) | 535 |
| AdeI | CACNNNGTG | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 311, 347 |
| AflII | CTTAAG | 1 cut(s) | 356 |
| AflIII | ACRYGT | 1 cut(s) | 392 |
| AgsI | TTSAA | 2 cut(s) | 560, 584 |
| AjiI | CACGTC | 1 cut(s) | 395 |
| AleI | CACNNNNGTG | 1 cut(s) | 440 |
| AluBI | AGCT | 5 cut(s) | 105, 515, 523, 545, 587 |
| AluI | AGCT | 5 cut(s) | 105, 515, 523, 545, 587 |
| AoxI | GGCC | 2 cut(s) | 66, 495 |
| ApeKI | GCWGC | 1 cut(s) | 478 |
| ApoI | RAATTY | 1 cut(s) | 535 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 373 |
| BanI | GGYRCC | 1 cut(s) | 374 |
| BauI | CACGAG | 1 cut(s) | 150 |
| BbvI | GCAGC | 1 cut(s) | 490 |
| BccI | CCATC | 1 cut(s) | 365 |
| BceAI | ACGGC | 1 cut(s) | 313 |
| BciVI | GTATCC | 1 cut(s) | 345 |
| BfaI | CTAG | 4 cut(s) | 140, 306, 524, 542 |
| BfmI | CTRYAG | 1 cut(s) | 572 |
| BfrI | CTTAAG | 1 cut(s) | 356 |
| BfuAI | ACCTGC | 2 cut(s) | 338, 437 |
| BfuI | GTATCC | 1 cut(s) | 345 |
| BisI | GCNGC | 1 cut(s) | 479 |
| BlsI | GCNGC | 1 cut(s) | 480 |
| BmgBI | CACGTC | 1 cut(s) | 395 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 2 cut(s) | 69, 376 |
| BmsI | GCATC | 1 cut(s) | 415 |
| BpmI | CTGGAG | 1 cut(s) | 531 |
| BsaJI | CCNNGG | 3 cut(s) | 329, 385, 498 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 311, 347 |
| Bse1I | ACTGG | 1 cut(s) | 548 |
| BseDI | CCNNGG | 3 cut(s) | 329, 385, 498 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 311, 347 |
| BseNI | ACTGG | 1 cut(s) | 548 |
| BseRI | GAGGAG | 2 cut(s) | 414, 545 |
| BseXI | GCAGC | 1 cut(s) | 490 |
| BshFI | GGCC | 2 cut(s) | 68, 497 |
| BshNI | GGYRCC | 1 cut(s) | 374 |
| BslFI | GGGAC | 1 cut(s) | 128 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 311, 347 |
| BsmFI | GGGAC | 1 cut(s) | 128 |
| BsnI | GGCC | 2 cut(s) | 68, 497 |
| BspANI | GGCC | 2 cut(s) | 68, 497 |
| BspLI | GGNNCC | 2 cut(s) | 69, 376 |
| BspMAI | CTGCAG | 1 cut(s) | 576 |
| BspMI | ACCTGC | 2 cut(s) | 338, 437 |
| BspT107I | GGYRCC | 1 cut(s) | 374 |
| BspTI | CTTAAG | 1 cut(s) | 356 |
| BsrI | ACTGG | 1 cut(s) | 548 |
| BssECI | CCNNGG | 3 cut(s) | 329, 385, 498 |
| BssSI | CACGAG | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 2 cut(s) | 385, 498 |
| Bst2BI | CACGAG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 2 cut(s) | 439, 569 |
| BstAFI | CTTAAG | 1 cut(s) | 356 |
| BstC8I | GCNNGC | 4 cut(s) | 123, 505, 517, 521 |
| BstDSI | CCRYGG | 1 cut(s) | 329 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 345 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 118, 325 |
| BstSFI | CTRYAG | 1 cut(s) | 572 |
| BstV1I | GCAGC | 1 cut(s) | 490 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 108 |
| BsuI | GTATCC | 1 cut(s) | 345 |
| BsuRI | GGCC | 2 cut(s) | 68, 497 |
| BtgI | CCRYGG | 1 cut(s) | 329 |
| BtrI | CACGTC | 1 cut(s) | 395 |
| BtsIMutI | CAGTG | 1 cut(s) | 467 |
| BveI | ACCTGC | 2 cut(s) | 338, 437 |
| Cac8I | GCNNGC | 4 cut(s) | 123, 505, 517, 521 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 471, 506 |
| CviAII | CATG | 1 cut(s) | 23 |
| DraIII | CACNNNGTG | 1 cut(s) | 152 |
| Eco130I | CCWWGG | 2 cut(s) | 385, 498 |
| Eco147I | AGGCCT | 1 cut(s) | 497 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 345 |
| EcoRI | GAATTC | 1 cut(s) | 535 |
| EcoT14I | CCWWGG | 2 cut(s) | 385, 498 |
| ErhI | CCWWGG | 2 cut(s) | 385, 498 |
| FaeI | CATG | 1 cut(s) | 26 |
| FaiI | YATR | 8 cut(s) | 24, 47, 93, 130, 135, 264, 266, 294 |
| FaqI | GGGAC | 1 cut(s) | 128 |
| FatI | CATG | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 1 cut(s) | 479 |
| Fsp4HI | GCNGC | 1 cut(s) | 479 |
| FspBI | CTAG | 4 cut(s) | 140, 306, 524, 542 |
| GluI | GCNGC | 1 cut(s) | 479 |
| GsuI | CTGGAG | 1 cut(s) | 531 |
| HaeIII | GGCC | 2 cut(s) | 68, 497 |
| Hin1II | CATG | 1 cut(s) | 26 |
| HinfI | GANTC | 1 cut(s) | 321 |
| HphI | GGTGA | 1 cut(s) | 373 |
| Hpy188I | TCNGA | 1 cut(s) | 469 |
| Hpy99I | CGWCG | 1 cut(s) | 399 |
| HpyCH4III | ACNGT | 2 cut(s) | 439, 569 |
| HpyCH4IV | ACGT | 1 cut(s) | 394 |
| HpyCH4V | TGCA | 6 cut(s) | 91, 238, 347, 478, 519, 574 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 118, 325 |
| HpySE526I | ACGT | 1 cut(s) | 394 |
| Hsp92II | CATG | 1 cut(s) | 26 |
| LmnI | GCTCC | 1 cut(s) | 550 |
| LpnPI | CCDG | 8 cut(s) | 84, 98, 218, 227, 301, 333, 432, 561 |
| Lsp1109I | GCAGC | 1 cut(s) | 490 |
| LweI | GCATC | 1 cut(s) | 415 |
| MaeI | CTAG | 4 cut(s) | 140, 306, 524, 542 |
| MaeII | ACGT | 1 cut(s) | 394 |
| MaeIII | GTNAC | 1 cut(s) | 298 |
| MboII | GAAGA | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 259, 535, 560 |
| MlyI | GAGTC | 1 cut(s) | 330 |
| MnlI | CCTC | 7 cut(s) | 159, 309, 348, 392, 395, 487, 523 |
| MseI | TTAA | 1 cut(s) | 357 |
| MslI | CAYNNNNRTG | 1 cut(s) | 440 |
| MspCI | CTTAAG | 1 cut(s) | 356 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 118, 325 |
| NlaIII | CATG | 1 cut(s) | 26 |
| NlaIV | GGNNCC | 2 cut(s) | 69, 376 |
| NmuCI | GTSAC | 1 cut(s) | 298 |
| OliI | CACNNNNGTG | 1 cut(s) | 440 |
| PaqCI | CACCTGC | 1 cut(s) | 437 |
| PceI | AGGCCT | 1 cut(s) | 497 |
| PkrI | GCNGC | 1 cut(s) | 480 |
| PleI | GAGTC | 1 cut(s) | 329 |
| PpsI | GAGTC | 1 cut(s) | 329 |
| PspN4I | GGNNCC | 2 cut(s) | 69, 376 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PstI | CTGCAG | 1 cut(s) | 576 |
| RseI | CAYNNNNRTG | 1 cut(s) | 440 |
| SaqAI | TTAA | 1 cut(s) | 357 |
| SatI | GCNGC | 1 cut(s) | 479 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 1 cut(s) | 330 |
| SfaNI | GCATC | 1 cut(s) | 415 |
| SfcI | CTRYAG | 1 cut(s) | 572 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 440 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 3 cut(s) | 259, 535, 560 |
| SseBI | AGGCCT | 1 cut(s) | 497 |
| SspI | AATATT | 1 cut(s) | 367 |
| SspMI | CTAG | 4 cut(s) | 140, 306, 524, 542 |
| StuI | AGGCCT | 1 cut(s) | 497 |
| StyI | CCWWGG | 2 cut(s) | 385, 498 |
| TaaI | ACNGT | 2 cut(s) | 439, 569 |
| TaiI | ACGT | 1 cut(s) | 397 |
| TaqI | TCGA | 1 cut(s) | 397 |
| TasI | AATT | 3 cut(s) | 259, 535, 560 |
| Tru1I | TTAA | 1 cut(s) | 357 |
| Tru9I | TTAA | 1 cut(s) | 357 |
| TscAI | CASTG | 1 cut(s) | 467 |
| TseFI | GTSAC | 1 cut(s) | 298 |
| TseI | GCWGC | 1 cut(s) | 478 |
| Tsp45I | GTSAC | 1 cut(s) | 298 |
| TspGWI | ACGGA | 1 cut(s) | 72 |
| TspRI | CASTG | 1 cut(s) | 467 |
| Vha464I | CTTAAG | 1 cut(s) | 356 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 345 |
| XapI | RAATTY | 1 cut(s) | 535 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 105 |
| XspI | CTAG | 4 cut(s) | 140, 306, 524, 542 |