ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 231 - 482 | 3.4e-25 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 15, 756, 1280 |
| AarI | CACCTGC | 2 cut(s) | 586, 652 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 735 |
| AbsI | CCTCGAGG | 1 cut(s) | 1083 |
| Acc36I | ACCTGC | 2 cut(s) | 586, 652 |
| Acc65I | GGTACC | 1 cut(s) | 1013 |
| AccB1I | GGYRCC | 1 cut(s) | 1013 |
| AccI | GTMKAC | 1 cut(s) | 1184 |
| AccII | CGCG | 1 cut(s) | 237 |
| AccIII | TCCGGA | 1 cut(s) | 556 |
| AciI | CCGC | 4 cut(s) | 362, 784, 912, 1157 |
| AclI | AACGTT | 2 cut(s) | 229, 1672 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 2 cut(s) | 1423, 1719 |
| AcyI | GRCGYC | 1 cut(s) | 1286 |
| AdeI | CACNNNGTG | 1 cut(s) | 827 |
| AfaI | GTAC | 2 cut(s) | 352, 1015 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 457, 657, 1106, 1477 |
| AgsI | TTSAA | 3 cut(s) | 35, 895, 934 |
| AjnI | CCWGG | 2 cut(s) | 366, 1016 |
| AluBI | AGCT | 4 cut(s) | 175, 196, 273, 1505 |
| AluI | AGCT | 4 cut(s) | 175, 196, 273, 1505 |
| Alw21I | GWGCWC | 1 cut(s) | 198 |
| Alw26I | GTCTC | 3 cut(s) | 892, 1057, 1116 |
| AlwI | GGATC | 1 cut(s) | 12 |
| Ama87I | CYCGRG | 2 cut(s) | 1083, 1530 |
| Aor13HI | TCCGGA | 1 cut(s) | 556 |
| AoxI | GGCC | 2 cut(s) | 364, 1468 |
| ApeKI | GCWGC | 2 cut(s) | 1348, 1571 |
| ApoI | RAATTY | 2 cut(s) | 1423, 1719 |
| AseI | ATTAAT | 1 cut(s) | 1242 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1506 |
| Asp718I | GGTACC | 1 cut(s) | 1013 |
| AspS9I | GGNCC | 3 cut(s) | 364, 554, 772 |
| AsuHPI | GGTGA | 5 cut(s) | 676, 1000, 1042, 1125, 1495 |
| AvaI | CYCGRG | 2 cut(s) | 1083, 1530 |
| AvaII | GGWCC | 2 cut(s) | 554, 772 |
| BaeGI | GKGCMC | 1 cut(s) | 142 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 1 cut(s) | 1013 |
| BanII | GRGCYC | 2 cut(s) | 198, 1167 |
| BbsI | GAAGAC | 1 cut(s) | 850 |
| Bbv12I | GWGCWC | 1 cut(s) | 198 |
| BbvI | GCAGC | 2 cut(s) | 1360, 1583 |
| BccI | CCATC | 5 cut(s) | 248, 554, 1027, 1108, 1393 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1201, 1235 |
| BciT130I | CCWGG | 2 cut(s) | 368, 1018 |
| BcoDI | GTCTC | 3 cut(s) | 892, 1057, 1116 |
| BfaI | CTAG | 1 cut(s) | 1104 |
| BfuAI | ACCTGC | 2 cut(s) | 586, 652 |
| BglII | AGATCT | 1 cut(s) | 879 |
| BisI | GCNGC | 2 cut(s) | 1349, 1572 |
| BlsI | GCNGC | 2 cut(s) | 1350, 1573 |
| Bme1390I | CCNGG | 2 cut(s) | 368, 1018 |
| Bme18I | GGWCC | 2 cut(s) | 554, 772 |
| BmeT110I | CYCGRG | 2 cut(s) | 1083, 1530 |
| BmgT120I | GGNCC | 3 cut(s) | 364, 554, 772 |
| BmiI | GGNNCC | 3 cut(s) | 6, 1007, 1015 |
| BmrFI | CCNGG | 2 cut(s) | 368, 1018 |
| BmsI | GCATC | 6 cut(s) | 349, 522, 544, 637, 1349, 1570 |
| BpiI | GAAGAC | 1 cut(s) | 850 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1151, 1183 |
| BpmI | CTGGAG | 1 cut(s) | 785 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1647 |
| BpuEI | CTTGAG | 1 cut(s) | 1153 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1560 |
| BsaHI | GRCGYC | 1 cut(s) | 1286 |
| BsaJI | CCNNGG | 1 cut(s) | 1009 |
| BsaWI | WCCGGW | 1 cut(s) | 556 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 497, 527, 783, 813 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 457, 657, 1106, 1477 |
| Bse1I | ACTGG | 2 cut(s) | 583, 596 |
| Bse3DI | GCAATG | 1 cut(s) | 751 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1560 |
| BseAI | TCCGGA | 1 cut(s) | 556 |
| BseBI | CCWGG | 2 cut(s) | 368, 1018 |
| BseDI | CCNNGG | 1 cut(s) | 1009 |
| BseGI | GGATG | 5 cut(s) | 415, 535, 565, 616, 1404 |
| BseJI | GATNNNNATC | 1 cut(s) | 1560 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 457, 657, 1106, 1477 |
| BseMI | GCAATG | 1 cut(s) | 751 |
| BseMII | CTCAG | 3 cut(s) | 459, 1221, 1674 |
| BseNI | ACTGG | 2 cut(s) | 583, 596 |
| BseRI | GAGGAG | 6 cut(s) | 173, 518, 998, 1009, 1310, 1427 |
| BseSI | GKGCMC | 1 cut(s) | 142 |
| BseXI | GCAGC | 2 cut(s) | 1360, 1583 |
| BsgI | GTGCAG | 2 cut(s) | 1590, 1625 |
| Bsh1236I | CGCG | 1 cut(s) | 237 |
| BshFI | GGCC | 2 cut(s) | 366, 1470 |
| BshNI | GGYRCC | 1 cut(s) | 1013 |
| BsiHKAI | GWGCWC | 1 cut(s) | 198 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1083, 1530 |
| BsiSI | CCGG | 1 cut(s) | 557 |
| BslFI | GGGAC | 1 cut(s) | 685 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 457, 657, 1106, 1477 |
| BsmAI | GTCTC | 3 cut(s) | 892, 1057, 1116 |
| BsmFI | GGGAC | 1 cut(s) | 685 |
| BsmI | GAATGC | 1 cut(s) | 1179 |
| BsnI | GGCC | 2 cut(s) | 366, 1470 |
| BsoBI | CYCGRG | 2 cut(s) | 1083, 1530 |
| Bsp1286I | GDGCHC | 3 cut(s) | 142, 198, 1167 |
| Bsp13I | TCCGGA | 1 cut(s) | 556 |
| Bsp1407I | TGTACA | 1 cut(s) | 350 |
| Bsp143I | GATC | 4 cut(s) | 4, 430, 879, 958 |
| BspACI | CCGC | 4 cut(s) | 362, 784, 912, 1157 |
| BspANI | GGCC | 2 cut(s) | 366, 1470 |
| BspCNI | CTCAG | 3 cut(s) | 460, 1220, 1675 |
| BspEI | TCCGGA | 1 cut(s) | 556 |
| BspFNI | CGCG | 1 cut(s) | 237 |
| BspHI | TCATGA | 1 cut(s) | 636 |
| BspLI | GGNNCC | 3 cut(s) | 6, 1007, 1015 |
| BspMI | ACCTGC | 2 cut(s) | 586, 652 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 1 cut(s) | 1013 |
| BsrDI | GCAATG | 1 cut(s) | 751 |
| BsrGI | TGTACA | 1 cut(s) | 350 |
| BsrI | ACTGG | 2 cut(s) | 583, 596 |
| BssECI | CCNNGG | 1 cut(s) | 1009 |
| BssMI | GATC | 4 cut(s) | 4, 430, 879, 958 |
| BssNAI | GTATAC | 1 cut(s) | 1185 |
| BssNI | GRCGYC | 1 cut(s) | 1286 |
| Bst1107I | GTATAC | 1 cut(s) | 1185 |
| Bst2UI | CCWGG | 2 cut(s) | 368, 1018 |
| Bst4CI | ACNGT | 5 cut(s) | 54, 795, 903, 1013, 1051 |
| Bst6I | CTCTTC | 2 cut(s) | 890, 1287 |
| BstACI | GRCGYC | 1 cut(s) | 1286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1229 |
| BstAUI | TGTACA | 1 cut(s) | 350 |
| BstC8I | GCNNGC | 1 cut(s) | 364 |
| BstDEI | CTNAG | 7 cut(s) | 468, 725, 1112, 1207, 1565, 1647, 1683 |
| BstDSI | CCRYGG | 1 cut(s) | 1009 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 655 |
| BstF5I | GGATG | 5 cut(s) | 415, 535, 565, 616, 1404 |
| BstFNI | CGCG | 1 cut(s) | 237 |
| BstKTI | GATC | 4 cut(s) | 7, 433, 882, 961 |
| BstMAI | GTCTC | 3 cut(s) | 892, 1057, 1116 |
| BstMBI | GATC | 4 cut(s) | 4, 430, 879, 958 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 56, 202, 1229 |
| BstNI | CCWGG | 2 cut(s) | 368, 1018 |
| BstNSI | RCATGY | 2 cut(s) | 126, 205 |
| BstSCI | CCNGG | 2 cut(s) | 366, 1016 |
| BstSLI | GKGCMC | 1 cut(s) | 142 |
| BstUI | CGCG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 2 cut(s) | 1360, 1583 |
| BstV2I | GAAGAC | 1 cut(s) | 850 |
| BstX2I | RGATCY | 2 cut(s) | 4, 879 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1393 |
| BstYI | RGATCY | 2 cut(s) | 4, 879 |
| BstZ17I | GTATAC | 1 cut(s) | 1185 |
| BsuRI | GGCC | 2 cut(s) | 366, 1470 |
| BtgI | CCRYGG | 1 cut(s) | 1009 |
| BtsCI | GGATG | 5 cut(s) | 415, 535, 565, 616, 1404 |
| BtsI | GCAGTG | 1 cut(s) | 1605 |
| BtsIMutI | CAGTG | 4 cut(s) | 50, 496, 590, 1605 |
| BveI | ACCTGC | 2 cut(s) | 586, 652 |
| Cac8I | GCNNGC | 1 cut(s) | 364 |
| CciI | TCATGA | 1 cut(s) | 636 |
| Cfr13I | GGNCC | 3 cut(s) | 364, 554, 772 |
| CseI | GACGC | 1 cut(s) | 1275 |
| Csp6I | GTAC | 2 cut(s) | 351, 1014 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 35, 70 |
| CviAII | CATG | 8 cut(s) | 123, 191, 202, 206, 637, 1454, 1661, 1734 |
| CviQI | GTAC | 2 cut(s) | 351, 1014 |
| DdeI | CTNAG | 7 cut(s) | 468, 725, 1112, 1207, 1565, 1647, 1683 |
| DpnI | GATC | 4 cut(s) | 6, 432, 881, 960 |
| DpnII | GATC | 4 cut(s) | 4, 430, 879, 958 |
| DraIII | CACNNNGTG | 1 cut(s) | 827 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 735 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 735 |
| Eam1104I | CTCTTC | 2 cut(s) | 890, 1287 |
| EarI | CTCTTC | 2 cut(s) | 890, 1287 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| Eco24I | GRGCYC | 2 cut(s) | 198, 1167 |
| Eco47I | GGWCC | 2 cut(s) | 554, 772 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco88I | CYCGRG | 2 cut(s) | 1083, 1530 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 655 |
| EcoO109I | RGGNCCY | 1 cut(s) | 772 |
| EcoRII | CCWGG | 2 cut(s) | 366, 1016 |
| EcoT22I | ATGCAT | 2 cut(s) | 207, 537 |
| EcoT38I | GRGCYC | 2 cut(s) | 198, 1167 |
| FaeI | CATG | 8 cut(s) | 126, 194, 205, 209, 640, 1457, 1664, 1737 |
| FaqI | GGGAC | 1 cut(s) | 685 |
| FatI | CATG | 8 cut(s) | 122, 190, 201, 205, 636, 1453, 1660, 1733 |
| FauI | CCCGC | 1 cut(s) | 355 |
| FauNDI | CATATG | 2 cut(s) | 955, 1621 |
| FblI | GTMKAC | 1 cut(s) | 1184 |
| Fnu4HI | GCNGC | 2 cut(s) | 1349, 1572 |
| FokI | GGATG | 5 cut(s) | 402, 522, 572, 623, 1411 |
| FriOI | GRGCYC | 2 cut(s) | 198, 1167 |
| Fsp4HI | GCNGC | 2 cut(s) | 1349, 1572 |
| FspBI | CTAG | 1 cut(s) | 1104 |
| GluI | GCNGC | 2 cut(s) | 1349, 1572 |
| GsuI | CTGGAG | 1 cut(s) | 785 |
| HaeIII | GGCC | 2 cut(s) | 366, 1470 |
| HapII | CCGG | 1 cut(s) | 557 |
| HgaI | GACGC | 1 cut(s) | 1275 |
| Hin1I | GRCGYC | 1 cut(s) | 1286 |
| Hin1II | CATG | 8 cut(s) | 126, 194, 205, 209, 640, 1457, 1664, 1737 |
| HincII | GTYRAC | 2 cut(s) | 249, 465 |
| HindII | GTYRAC | 2 cut(s) | 249, 465 |
| HindIII | AAGCTT | 1 cut(s) | 1503 |
| HinfI | GANTC | 7 cut(s) | 64, 548, 688, 1096, 1124, 1265, 1700 |
| HpaII | CCGG | 1 cut(s) | 557 |
| HphI | GGTGA | 5 cut(s) | 676, 1000, 1042, 1125, 1495 |
| Hpy166II | GTNNAC | 4 cut(s) | 249, 351, 465, 1185 |
| Hpy188I | TCNGA | 6 cut(s) | 420, 540, 646, 856, 1291, 1705 |
| Hpy188III | TCNNGA | 6 cut(s) | 557, 637, 802, 1170, 1409, 1532 |
| Hpy8I | GTNNAC | 4 cut(s) | 249, 351, 465, 1185 |
| HpyAV | CCTTC | 7 cut(s) | 365, 538, 763, 799, 1481, 1546, 1707 |
| HpyCH4III | ACNGT | 5 cut(s) | 54, 795, 903, 1013, 1051 |
| HpyCH4IV | ACGT | 5 cut(s) | 166, 184, 229, 1181, 1672 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 56, 202, 1229 |
| HpyF3I | CTNAG | 7 cut(s) | 468, 725, 1112, 1207, 1565, 1647, 1683 |
| HpySE526I | ACGT | 5 cut(s) | 166, 184, 229, 1181, 1672 |
| Hsp92I | GRCGYC | 1 cut(s) | 1286 |
| Hsp92II | CATG | 8 cut(s) | 126, 194, 205, 209, 640, 1457, 1664, 1737 |
| Kpn2I | TCCGGA | 1 cut(s) | 556 |
| KpnI | GGTACC | 1 cut(s) | 1017 |
| Kzo9I | GATC | 4 cut(s) | 4, 430, 879, 958 |
| LmnI | GCTCC | 4 cut(s) | 172, 201, 709, 820 |
| Lsp1109I | GCAGC | 2 cut(s) | 1360, 1583 |
| LweI | GCATC | 6 cut(s) | 349, 522, 544, 637, 1349, 1570 |
| MaeI | CTAG | 1 cut(s) | 1104 |
| MaeII | ACGT | 5 cut(s) | 166, 184, 229, 1181, 1672 |
| MaeIII | GTNAC | 7 cut(s) | 587, 613, 795, 1042, 1358, 1487, 1641 |
| MalI | GATC | 4 cut(s) | 6, 432, 881, 960 |
| MboI | GATC | 4 cut(s) | 4, 430, 879, 958 |
| MboII | GAAGA | 9 cut(s) | 40, 313, 316, 319, 433, 855, 907, 1304, 1346 |
| MflI | RGATCY | 2 cut(s) | 4, 879 |
| MhlI | GDGCHC | 3 cut(s) | 142, 198, 1167 |
| MluCI | AATT | 4 cut(s) | 810, 859, 1423, 1719 |
| MlyI | GAGTC | 3 cut(s) | 73, 557, 1118 |
| MmeI | TCCRAC | 1 cut(s) | 1499 |
| Mph1103I | ATGCAT | 2 cut(s) | 207, 537 |
| MroI | TCCGGA | 1 cut(s) | 556 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1506 |
| MseI | TTAA | 6 cut(s) | 525, 948, 1071, 1242, 1305, 1741 |
| MslI | CAYNNNNRTG | 2 cut(s) | 204, 1566 |
| MspI | CCGG | 1 cut(s) | 557 |
| MspR9I | CCNGG | 2 cut(s) | 368, 1018 |
| Mva1269I | GAATGC | 1 cut(s) | 1179 |
| MvaI | CCWGG | 2 cut(s) | 368, 1018 |
| MvnI | CGCG | 1 cut(s) | 237 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 56, 202, 1229 |
| NdeI | CATATG | 2 cut(s) | 955, 1621 |
| NdeII | GATC | 4 cut(s) | 4, 430, 879, 958 |
| NlaIII | CATG | 8 cut(s) | 126, 194, 205, 209, 640, 1457, 1664, 1737 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 1007, 1015 |
| NsiI | ATGCAT | 2 cut(s) | 207, 537 |
| NspI | RCATGY | 2 cut(s) | 126, 205 |
| PaeR7I | CTCGAG | 2 cut(s) | 1083, 1530 |
| PagI | TCATGA | 1 cut(s) | 636 |
| PaqCI | CACCTGC | 2 cut(s) | 586, 652 |
| PctI | GAATGC | 1 cut(s) | 1179 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1506 |
| PfeI | GAWTC | 4 cut(s) | 688, 1096, 1265, 1700 |
| PkrI | GCNGC | 2 cut(s) | 1350, 1573 |
| PleI | GAGTC | 3 cut(s) | 72, 556, 1118 |
| PpsI | GAGTC | 3 cut(s) | 72, 556, 1118 |
| PpuMI | RGGWCCY | 1 cut(s) | 772 |
| PshBI | ATTAAT | 1 cut(s) | 1242 |
| PsiI | TTATAA | 3 cut(s) | 15, 756, 1280 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp1406I | AACGTT | 2 cut(s) | 229, 1672 |
| Psp5II | RGGWCCY | 1 cut(s) | 772 |
| Psp6I | CCWGG | 2 cut(s) | 366, 1016 |
| PspGI | CCWGG | 2 cut(s) | 366, 1016 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 1007, 1015 |
| PspPI | GGNCC | 3 cut(s) | 364, 554, 772 |
| PspPPI | RGGWCCY | 1 cut(s) | 772 |
| PspXI | VCTCGAGB | 1 cut(s) | 1083 |
| PsuI | RGATCY | 2 cut(s) | 4, 879 |
| RsaI | GTAC | 2 cut(s) | 352, 1015 |
| RsaNI | GTAC | 2 cut(s) | 351, 1014 |
| RseI | CAYNNNNRTG | 2 cut(s) | 204, 1566 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SaqAI | TTAA | 6 cut(s) | 525, 948, 1071, 1242, 1305, 1741 |
| SatI | GCNGC | 2 cut(s) | 1349, 1572 |
| Sau3AI | GATC | 4 cut(s) | 4, 430, 879, 958 |
| Sau96I | GGNCC | 3 cut(s) | 364, 554, 772 |
| SchI | GAGTC | 3 cut(s) | 73, 557, 1118 |
| ScrFI | CCNGG | 2 cut(s) | 368, 1018 |
| SduI | GDGCHC | 3 cut(s) | 142, 198, 1167 |
| SfaNI | GCATC | 6 cut(s) | 349, 522, 544, 637, 1349, 1570 |
| Sfr274I | CTCGAG | 2 cut(s) | 1083, 1530 |
| SinI | GGWCC | 2 cut(s) | 554, 772 |
| SlaI | CTCGAG | 2 cut(s) | 1083, 1530 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 204, 1566 |
| SmlI | CTYRAG | 3 cut(s) | 1083, 1168, 1530 |
| SmoI | CTYRAG | 3 cut(s) | 1083, 1168, 1530 |
| Sse9I | AATT | 4 cut(s) | 810, 859, 1423, 1719 |
| SsiI | CCGC | 4 cut(s) | 362, 784, 912, 1157 |
| SspI | AATATT | 1 cut(s) | 1318 |
| SspMI | CTAG | 1 cut(s) | 1104 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 2 cut(s) | 366, 1016 |
| TaaI | ACNGT | 5 cut(s) | 54, 795, 903, 1013, 1051 |
| TaiI | ACGT | 5 cut(s) | 169, 187, 232, 1184, 1675 |
| TaqI | TCGA | 5 cut(s) | 429, 767, 961, 1084, 1531 |
| TaqII | GACCGA | 1 cut(s) | 745 |
| TasI | AATT | 4 cut(s) | 810, 859, 1423, 1719 |
| TatI | WGTACW | 1 cut(s) | 350 |
| TfiI | GAWTC | 4 cut(s) | 688, 1096, 1265, 1700 |
| Tru1I | TTAA | 6 cut(s) | 525, 948, 1071, 1242, 1305, 1741 |
| Tru9I | TTAA | 6 cut(s) | 525, 948, 1071, 1242, 1305, 1741 |
| TscAI | CASTG | 4 cut(s) | 57, 496, 590, 1605 |
| TseI | GCWGC | 2 cut(s) | 1348, 1571 |
| TspGWI | ACGGA | 1 cut(s) | 1493 |
| TspRI | CASTG | 4 cut(s) | 57, 496, 590, 1605 |
| VpaK11BI | GGWCC | 2 cut(s) | 554, 772 |
| VspI | ATTAAT | 1 cut(s) | 1242 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 655 |
| XapI | RAATTY | 2 cut(s) | 1423, 1719 |
| XceI | RCATGY | 2 cut(s) | 126, 205 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 757 |
| XhoI | CTCGAG | 2 cut(s) | 1083, 1530 |
| XmiI | GTMKAC | 1 cut(s) | 1184 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1506 |
| XspI | CTAG | 1 cut(s) | 1104 |
| Zsp2I | ATGCAT | 2 cut(s) | 207, 537 |