ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 81 |
| AcoI | YGGCCR | 1 cut(s) | 42 |
| AcsI | RAATTY | 1 cut(s) | 449 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 389 |
| AflII | CTTAAG | 1 cut(s) | 398 |
| AgsI | TTSAA | 2 cut(s) | 100, 359 |
| AjnI | CCWGG | 1 cut(s) | 39 |
| AluBI | AGCT | 4 cut(s) | 104, 319, 370, 419 |
| AluI | AGCT | 4 cut(s) | 104, 319, 370, 419 |
| Alw21I | GWGCWC | 1 cut(s) | 313 |
| AoxI | GGCC | 3 cut(s) | 42, 402, 442 |
| ApeKI | GCWGC | 1 cut(s) | 347 |
| ApoI | RAATTY | 1 cut(s) | 449 |
| AsuHPI | GGTGA | 1 cut(s) | 343 |
| BalI | TGGCCA | 1 cut(s) | 44 |
| Bbv12I | GWGCWC | 1 cut(s) | 313 |
| BbvI | GCAGC | 1 cut(s) | 334 |
| BccI | CCATC | 2 cut(s) | 124, 407 |
| BciT130I | CCWGG | 1 cut(s) | 41 |
| BfaI | CTAG | 2 cut(s) | 185, 410 |
| BfrI | CTTAAG | 1 cut(s) | 398 |
| BfuAI | ACCTGC | 1 cut(s) | 81 |
| BisI | GCNGC | 1 cut(s) | 348 |
| BlsI | GCNGC | 1 cut(s) | 349 |
| Bme1390I | CCNGG | 1 cut(s) | 41 |
| BmrFI | CCNGG | 1 cut(s) | 41 |
| BmsI | GCATC | 1 cut(s) | 192 |
| Bpu10I | CCTNAGC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 1 cut(s) | 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 389 |
| BseBI | CCWGG | 1 cut(s) | 41 |
| BseDI | CCNNGG | 1 cut(s) | 39 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BseMII | CTCAG | 2 cut(s) | 239, 357 |
| BseRI | GAGGAG | 2 cut(s) | 369, 372 |
| BseXI | GCAGC | 1 cut(s) | 334 |
| Bsh1285I | CGRYCG | 1 cut(s) | 458 |
| BshFI | GGCC | 3 cut(s) | 44, 404, 444 |
| BsiEI | CGRYCG | 1 cut(s) | 458 |
| BsiHKAI | GWGCWC | 1 cut(s) | 313 |
| BslFI | GGGAC | 1 cut(s) | 280 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BsmFI | GGGAC | 1 cut(s) | 280 |
| BsnI | GGCC | 3 cut(s) | 44, 404, 444 |
| Bsp1286I | GDGCHC | 1 cut(s) | 313 |
| Bsp143I | GATC | 1 cut(s) | 386 |
| BspANI | GGCC | 3 cut(s) | 44, 404, 444 |
| BspCNI | CTCAG | 2 cut(s) | 240, 358 |
| BspHI | TCATGA | 1 cut(s) | 301 |
| BspMI | ACCTGC | 1 cut(s) | 81 |
| BspTI | CTTAAG | 1 cut(s) | 398 |
| BssECI | CCNNGG | 1 cut(s) | 39 |
| BssMI | GATC | 1 cut(s) | 386 |
| Bst2UI | CCWGG | 1 cut(s) | 41 |
| Bst4CI | ACNGT | 1 cut(s) | 459 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstAFI | CTTAAG | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 3 cut(s) | 248, 324, 366 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 387 |
| BstKTI | GATC | 1 cut(s) | 389 |
| BstMBI | GATC | 1 cut(s) | 386 |
| BstMCI | CGRYCG | 1 cut(s) | 458 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 41 |
| BstNI | CCWGG | 1 cut(s) | 41 |
| BstNSI | RCATGY | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 39 |
| BstV1I | GCAGC | 1 cut(s) | 334 |
| BsuRI | GGCC | 3 cut(s) | 44, 404, 444 |
| BveI | ACCTGC | 1 cut(s) | 81 |
| Cac8I | GCNNGC | 1 cut(s) | 21 |
| CciI | TCATGA | 1 cut(s) | 301 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviAII | CATG | 3 cut(s) | 20, 206, 302 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DdeI | CTNAG | 3 cut(s) | 248, 324, 366 |
| DpnI | GATC | 1 cut(s) | 388 |
| DpnII | GATC | 1 cut(s) | 386 |
| EaeI | YGGCCR | 1 cut(s) | 42 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| Eco147I | AGGCCT | 1 cut(s) | 444 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 387 |
| EcoRII | CCWGG | 1 cut(s) | 39 |
| EcoT22I | ATGCAT | 1 cut(s) | 207 |
| FaeI | CATG | 3 cut(s) | 23, 209, 305 |
| FaiI | YATR | 6 cut(s) | 21, 27, 207, 219, 281, 303 |
| FaqI | GGGAC | 1 cut(s) | 280 |
| FatI | CATG | 3 cut(s) | 19, 205, 301 |
| Fnu4HI | GCNGC | 1 cut(s) | 348 |
| Fsp4HI | GCNGC | 1 cut(s) | 348 |
| FspBI | CTAG | 2 cut(s) | 185, 410 |
| GluI | GCNGC | 1 cut(s) | 348 |
| HaeIII | GGCC | 3 cut(s) | 44, 404, 444 |
| Hin1II | CATG | 3 cut(s) | 23, 209, 305 |
| HinfI | GANTC | 4 cut(s) | 268, 283, 355, 376 |
| HphI | GGTGA | 1 cut(s) | 343 |
| Hpy188I | TCNGA | 2 cut(s) | 244, 463 |
| Hpy188III | TCNNGA | 3 cut(s) | 302, 365, 410 |
| HpyCH4III | ACNGT | 1 cut(s) | 459 |
| HpyCH4V | TGCA | 3 cut(s) | 19, 205, 217 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 41 |
| HpyF3I | CTNAG | 3 cut(s) | 248, 324, 366 |
| Hsp92II | CATG | 3 cut(s) | 23, 209, 305 |
| Kzo9I | GATC | 1 cut(s) | 386 |
| LmnI | GCTCC | 2 cut(s) | 142, 416 |
| LpnPI | CCDG | 7 cut(s) | 26, 35, 53, 76, 115, 375, 378 |
| Lsp1109I | GCAGC | 1 cut(s) | 334 |
| LweI | GCATC | 1 cut(s) | 192 |
| MaeI | CTAG | 2 cut(s) | 185, 410 |
| MaeIII | GTNAC | 1 cut(s) | 11 |
| MalI | GATC | 1 cut(s) | 388 |
| MboI | GATC | 1 cut(s) | 386 |
| MboII | GAAGA | 2 cut(s) | 70, 146 |
| MhlI | GDGCHC | 1 cut(s) | 313 |
| MlsI | TGGCCA | 1 cut(s) | 44 |
| MluCI | AATT | 2 cut(s) | 28, 449 |
| MluNI | TGGCCA | 1 cut(s) | 44 |
| MlyI | GAGTC | 3 cut(s) | 262, 277, 370 |
| MmeI | TCCRAC | 2 cut(s) | 35, 270 |
| MnlI | CCTC | 5 cut(s) | 243, 257, 390, 393, 442 |
| Mox20I | TGGCCA | 1 cut(s) | 44 |
| Mph1103I | ATGCAT | 1 cut(s) | 207 |
| MscI | TGGCCA | 1 cut(s) | 44 |
| MseI | TTAA | 5 cut(s) | 66, 179, 231, 399, 423 |
| MslI | CAYNNNNRTG | 1 cut(s) | 306 |
| Msp20I | TGGCCA | 1 cut(s) | 44 |
| MspCI | CTTAAG | 1 cut(s) | 398 |
| MspR9I | CCNGG | 1 cut(s) | 41 |
| MvaI | CCWGG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 41 |
| NdeII | GATC | 1 cut(s) | 386 |
| NlaIII | CATG | 3 cut(s) | 23, 209, 305 |
| NmuCI | GTSAC | 1 cut(s) | 11 |
| NsiI | ATGCAT | 1 cut(s) | 207 |
| NspI | RCATGY | 1 cut(s) | 23 |
| PaeI | GCATGC | 1 cut(s) | 23 |
| PagI | TCATGA | 1 cut(s) | 301 |
| PceI | AGGCCT | 1 cut(s) | 444 |
| PfeI | GAWTC | 1 cut(s) | 355 |
| PkrI | GCNGC | 1 cut(s) | 349 |
| PleI | GAGTC | 3 cut(s) | 262, 277, 370 |
| PpsI | GAGTC | 3 cut(s) | 262, 277, 370 |
| Psp6I | CCWGG | 1 cut(s) | 39 |
| PspGI | CCWGG | 1 cut(s) | 39 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 306 |
| SaqAI | TTAA | 5 cut(s) | 66, 179, 231, 399, 423 |
| SatI | GCNGC | 1 cut(s) | 348 |
| Sau3AI | GATC | 1 cut(s) | 386 |
| SchI | GAGTC | 3 cut(s) | 262, 277, 370 |
| ScrFI | CCNGG | 1 cut(s) | 41 |
| SduI | GDGCHC | 1 cut(s) | 313 |
| SetI | ASST | 6 cut(s) | 95, 106, 321, 372, 394, 421 |
| SfaNI | GCATC | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 306 |
| SmlI | CTYRAG | 1 cut(s) | 398 |
| SmoI | CTYRAG | 1 cut(s) | 398 |
| SphI | GCATGC | 1 cut(s) | 23 |
| Sse9I | AATT | 2 cut(s) | 28, 449 |
| SseBI | AGGCCT | 1 cut(s) | 444 |
| SspMI | CTAG | 2 cut(s) | 185, 410 |
| StuI | AGGCCT | 1 cut(s) | 444 |
| StyD4I | CCNGG | 1 cut(s) | 39 |
| TaaI | ACNGT | 1 cut(s) | 459 |
| TaqI | TCGA | 2 cut(s) | 385, 454 |
| TasI | AATT | 2 cut(s) | 28, 449 |
| TfiI | GAWTC | 1 cut(s) | 355 |
| Tru1I | TTAA | 5 cut(s) | 66, 179, 231, 399, 423 |
| Tru9I | TTAA | 5 cut(s) | 66, 179, 231, 399, 423 |
| TseFI | GTSAC | 1 cut(s) | 11 |
| TseI | GCWGC | 1 cut(s) | 347 |
| Tsp45I | GTSAC | 1 cut(s) | 11 |
| TspDTI | ATGAA | 3 cut(s) | 264, 290, 318 |
| TspGWI | ACGGA | 1 cut(s) | 129 |
| Vha464I | CTTAAG | 1 cut(s) | 398 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 387 |
| XapI | RAATTY | 1 cut(s) | 449 |
| XbaI | TCTAGA | 1 cut(s) | 409 |
| XceI | RCATGY | 1 cut(s) | 23 |
| XspI | CTAG | 2 cut(s) | 185, 410 |
| Zsp2I | ATGCAT | 1 cut(s) | 207 |