Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 168 |
| AcsI | RAATTY | 1 cut(s) | 88 |
| AcuI | CTGAAG | 2 cut(s) | 57, 97 |
| AfaI | GTAC | 2 cut(s) | 126, 138 |
| AluBI | AGCT | 3 cut(s) | 82, 271, 292 |
| AluI | AGCT | 3 cut(s) | 82, 271, 292 |
| ApoI | RAATTY | 1 cut(s) | 88 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 70 |
| BanII | GRGCYC | 1 cut(s) | 204 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BmiI | GGNNCC | 1 cut(s) | 203 |
| BmrI | ACTGGG | 1 cut(s) | 98 |
| BmuI | ACTGGG | 1 cut(s) | 98 |
| BpmI | CTGGAG | 1 cut(s) | 44 |
| Bpu10I | CCTNAGC | 1 cut(s) | 12 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseGI | GGATG | 1 cut(s) | 52 |
| BseMII | CTCAG | 2 cut(s) | 26, 310 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| Bsp1286I | GDGCHC | 1 cut(s) | 204 |
| Bsp1407I | TGTACA | 2 cut(s) | 124, 136 |
| BspCNI | CTCAG | 2 cut(s) | 25, 309 |
| BspLI | GGNNCC | 1 cut(s) | 203 |
| BsrGI | TGTACA | 2 cut(s) | 124, 136 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BstAUI | TGTACA | 2 cut(s) | 124, 136 |
| BstC8I | GCNNGC | 1 cut(s) | 307 |
| BstDEI | CTNAG | 2 cut(s) | 12, 296 |
| BstF5I | GGATG | 1 cut(s) | 52 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 289 |
| BstNSI | RCATGY | 1 cut(s) | 309 |
| BtsCI | GGATG | 1 cut(s) | 52 |
| BtsIMutI | CAGTG | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 1 cut(s) | 307 |
| Csp6I | GTAC | 2 cut(s) | 125, 137 |
| CviAII | CATG | 1 cut(s) | 306 |
| CviJI | RGCY | 9 cut(s) | 17, 29, 71, 82, 102, 110, 202, 271, 292 |
| CviKI_1 | RGCY | 9 cut(s) | 17, 29, 71, 82, 102, 110, 202, 271, 292 |
| CviQI | GTAC | 2 cut(s) | 125, 137 |
| DdeI | CTNAG | 2 cut(s) | 12, 296 |
| Eco24I | GRGCYC | 1 cut(s) | 204 |
| Eco57I | CTGAAG | 2 cut(s) | 57, 97 |
| EcoT38I | GRGCYC | 1 cut(s) | 204 |
| FaeI | CATG | 1 cut(s) | 309 |
| FatI | CATG | 1 cut(s) | 305 |
| FauNDI | CATATG | 2 cut(s) | 61, 184 |
| FblI | GTMKAC | 1 cut(s) | 168 |
| FokI | GGATG | 1 cut(s) | 59 |
| FriOI | GRGCYC | 1 cut(s) | 204 |
| FspBI | CTAG | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 309 |
| HinfI | GANTC | 2 cut(s) | 40, 179 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 2 cut(s) | 218, 321 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyAV | CCTTC | 3 cut(s) | 60, 121, 337 |
| HpyCH4IV | ACGT | 1 cut(s) | 220 |
| HpyCH4V | TGCA | 3 cut(s) | 305, 309, 340 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 289 |
| HpyF3I | CTNAG | 2 cut(s) | 12, 296 |
| HpySE526I | ACGT | 1 cut(s) | 220 |
| Hsp92II | CATG | 1 cut(s) | 309 |
| LmnI | GCTCC | 1 cut(s) | 207 |
| LpnPI | CCDG | 6 cut(s) | 8, 29, 60, 113, 117, 182 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MaeII | ACGT | 1 cut(s) | 220 |
| MhlI | GDGCHC | 1 cut(s) | 204 |
| MluCI | AATT | 2 cut(s) | 88, 174 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| MnlI | CCTC | 1 cut(s) | 19 |
| MroXI | GAANNNNTTC | 1 cut(s) | 70 |
| MseI | TTAA | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 289 |
| NdeI | CATATG | 2 cut(s) | 61, 184 |
| NlaIII | CATG | 1 cut(s) | 309 |
| NlaIV | GGNNCC | 1 cut(s) | 203 |
| NspI | RCATGY | 1 cut(s) | 309 |
| PaeI | GCATGC | 1 cut(s) | 309 |
| PdmI | GAANNNNTTC | 1 cut(s) | 70 |
| PfeI | GAWTC | 1 cut(s) | 40 |
| PleI | GAGTC | 1 cut(s) | 187 |
| PpsI | GAGTC | 1 cut(s) | 187 |
| PspN4I | GGNNCC | 1 cut(s) | 203 |
| RsaI | GTAC | 2 cut(s) | 126, 138 |
| RsaNI | GTAC | 2 cut(s) | 125, 137 |
| SaqAI | TTAA | 1 cut(s) | 93 |
| SchI | GAGTC | 1 cut(s) | 188 |
| SduI | GDGCHC | 1 cut(s) | 204 |
| SetI | ASST | 4 cut(s) | 84, 223, 273, 294 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| SphI | GCATGC | 1 cut(s) | 309 |
| Sse9I | AATT | 2 cut(s) | 88, 174 |
| SspMI | CTAG | 1 cut(s) | 83 |
| TaiI | ACGT | 1 cut(s) | 223 |
| TasI | AATT | 2 cut(s) | 88, 174 |
| TatI | WGTACW | 2 cut(s) | 124, 136 |
| TfiI | GAWTC | 1 cut(s) | 40 |
| Tru1I | TTAA | 1 cut(s) | 93 |
| Tru9I | TTAA | 1 cut(s) | 93 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TspDTI | ATGAA | 1 cut(s) | 159 |
| TspRI | CASTG | 1 cut(s) | 304 |
| XapI | RAATTY | 1 cut(s) | 88 |
| XceI | RCATGY | 1 cut(s) | 309 |
| XmiI | GTMKAC | 1 cut(s) | 168 |
| XmnI | GAANNNNTTC | 1 cut(s) | 70 |
| XspI | CTAG | 1 cut(s) | 83 |