Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 217, 313, 346 |
| AcoI | YGGCCR | 1 cut(s) | 180 |
| AcuI | CTGAAG | 1 cut(s) | 47 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 13, 66, 67 |
| AflIII | ACRYGT | 1 cut(s) | 289 |
| AgsI | TTSAA | 3 cut(s) | 26, 146, 261 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 293 |
| AluBI | AGCT | 2 cut(s) | 86, 360 |
| AluI | AGCT | 2 cut(s) | 86, 360 |
| Alw26I | GTCTC | 3 cut(s) | 26, 243, 262 |
| AoxI | GGCC | 2 cut(s) | 180, 210 |
| AspS9I | GGNCC | 1 cut(s) | 211 |
| BalI | TGGCCA | 1 cut(s) | 182 |
| BcoDI | GTCTC | 3 cut(s) | 26, 243, 262 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BfmI | CTRYAG | 1 cut(s) | 245 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 293 |
| BmgT120I | GGNCC | 1 cut(s) | 211 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 13, 66, 67 |
| BseGI | GGATG | 2 cut(s) | 112, 319 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 13, 66, 67 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseRI | GAGGAG | 3 cut(s) | 86, 231, 330 |
| BsgI | GTGCAG | 1 cut(s) | 25 |
| BshFI | GGCC | 2 cut(s) | 182, 212 |
| BslFI | GGGAC | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 13, 66, 67 |
| BsmAI | GTCTC | 3 cut(s) | 26, 243, 262 |
| BsmBI | CGTCTC | 1 cut(s) | 243 |
| BsmFI | GGGAC | 1 cut(s) | 29 |
| BsnI | GGCC | 2 cut(s) | 182, 212 |
| BspACI | CCGC | 3 cut(s) | 217, 313, 346 |
| BspANI | GGCC | 2 cut(s) | 182, 212 |
| BspCNI | CTCAG | 1 cut(s) | 258 |
| BspHI | TCATGA | 1 cut(s) | 362 |
| BspMAI | CTGCAG | 1 cut(s) | 249 |
| Bst4CI | ACNGT | 1 cut(s) | 176 |
| BstC8I | GCNNGC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 1 cut(s) | 266 |
| BstF5I | GGATG | 2 cut(s) | 112, 319 |
| BstMAI | GTCTC | 3 cut(s) | 26, 243, 262 |
| BstNSI | RCATGY | 1 cut(s) | 293 |
| BstSFI | CTRYAG | 1 cut(s) | 245 |
| BsuRI | GGCC | 2 cut(s) | 182, 212 |
| BtsCI | GGATG | 2 cut(s) | 112, 319 |
| BtsIMutI | CAGTG | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 1 cut(s) | 192 |
| CciI | TCATGA | 1 cut(s) | 362 |
| Cfr13I | GGNCC | 1 cut(s) | 211 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 159, 194 |
| CviAII | CATG | 3 cut(s) | 155, 290, 363 |
| CviJI | RGCY | 5 cut(s) | 86, 182, 190, 212, 360 |
| CviKI_1 | RGCY | 5 cut(s) | 86, 182, 190, 212, 360 |
| DdeI | CTNAG | 1 cut(s) | 266 |
| DriI | GACNNNNNGTC | 1 cut(s) | 293 |
| EaeI | YGGCCR | 1 cut(s) | 180 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 293 |
| Eco57I | CTGAAG | 1 cut(s) | 47 |
| Esp3I | CGTCTC | 1 cut(s) | 243 |
| FaeI | CATG | 3 cut(s) | 158, 293, 366 |
| FaiI | YATR | 4 cut(s) | 57, 156, 291, 364 |
| FaqI | GGGAC | 1 cut(s) | 29 |
| FatI | CATG | 3 cut(s) | 154, 289, 362 |
| FauI | CCCGC | 1 cut(s) | 320 |
| FokI | GGATG | 2 cut(s) | 119, 306 |
| FspBI | CTAG | 1 cut(s) | 83 |
| HaeIII | GGCC | 2 cut(s) | 182, 212 |
| Hin1II | CATG | 3 cut(s) | 158, 293, 366 |
| Hpy188I | TCNGA | 2 cut(s) | 66, 267 |
| Hpy188III | TCNNGA | 2 cut(s) | 164, 363 |
| Hpy99I | CGWCG | 3 cut(s) | 299, 302, 305 |
| HpyAV | CCTTC | 3 cut(s) | 71, 90, 267 |
| HpyCH4III | ACNGT | 1 cut(s) | 176 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 42, 114, 194, 247 |
| HpyF3I | CTNAG | 1 cut(s) | 266 |
| Hsp92II | CATG | 3 cut(s) | 158, 293, 366 |
| LmnI | GCTCC | 1 cut(s) | 343 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MlsI | TGGCCA | 1 cut(s) | 182 |
| MluCI | AATT | 1 cut(s) | 307 |
| MluNI | TGGCCA | 1 cut(s) | 182 |
| Mox20I | TGGCCA | 1 cut(s) | 182 |
| MscI | TGGCCA | 1 cut(s) | 182 |
| MseI | TTAA | 2 cut(s) | 125, 134 |
| Msp20I | TGGCCA | 1 cut(s) | 182 |
| NlaIII | CATG | 3 cut(s) | 158, 293, 366 |
| NspI | RCATGY | 1 cut(s) | 293 |
| PagI | TCATGA | 1 cut(s) | 362 |
| PciI | ACATGT | 1 cut(s) | 289 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 300 |
| PscI | ACATGT | 1 cut(s) | 289 |
| PspPI | GGNCC | 1 cut(s) | 211 |
| PstI | CTGCAG | 1 cut(s) | 249 |
| SaqAI | TTAA | 2 cut(s) | 125, 134 |
| Sau96I | GGNCC | 1 cut(s) | 211 |
| SetI | ASST | 6 cut(s) | 84, 88, 122, 201, 231, 362 |
| SfcI | CTRYAG | 1 cut(s) | 245 |
| Sse9I | AATT | 1 cut(s) | 307 |
| SsiI | CCGC | 3 cut(s) | 217, 313, 346 |
| SspMI | CTAG | 1 cut(s) | 83 |
| TaaI | ACNGT | 1 cut(s) | 176 |
| TasI | AATT | 1 cut(s) | 307 |
| Tru1I | TTAA | 2 cut(s) | 125, 134 |
| Tru9I | TTAA | 2 cut(s) | 125, 134 |
| TscAI | CASTG | 1 cut(s) | 181 |
| TspGWI | ACGGA | 1 cut(s) | 225 |
| TspRI | CASTG | 1 cut(s) | 181 |
| XceI | RCATGY | 1 cut(s) | 293 |
| XspI | CTAG | 1 cut(s) | 83 |