Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 30 - 68 | 1.5e-11 | Leucine rich repeat N-terminal domain |
| LRR_8 | PF13855 | 98 - 157 | 9.3e-07 | Leucine rich repeat |
| Pkinase | PF00069 | 313 - 576 | 1.7e-45 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 314 - 577 | 9.3e-42 | Protein tyrosine and serine/threonine kinase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1235 |
| AccBSI | CCGCTC | 1 cut(s) | 402 |
| AccII | CGCG | 1 cut(s) | 527 |
| AciI | CCGC | 4 cut(s) | 402, 618, 705, 1619 |
| AclWI | GGATC | 4 cut(s) | 164, 170, 1295, 1610 |
| AcoI | YGGCCR | 1 cut(s) | 724 |
| AcsI | RAATTY | 4 cut(s) | 670, 1071, 1105, 1576 |
| AcuI | CTGAAG | 3 cut(s) | 100, 137, 327 |
| AdeI | CACNNNGTG | 1 cut(s) | 1720 |
| AfaI | GTAC | 2 cut(s) | 361, 977 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 278, 494, 563, 1596, 1716 |
| AflIII | ACRYGT | 1 cut(s) | 525 |
| AgsI | TTSAA | 7 cut(s) | 459, 523, 934, 1058, 1228, 1689, 1736 |
| AjnI | CCWGG | 3 cut(s) | 348, 1254, 1494 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 933, 965 |
| Alw21I | GWGCWC | 1 cut(s) | 763 |
| Alw26I | GTCTC | 3 cut(s) | 154, 920, 1599 |
| AlwI | GGATC | 4 cut(s) | 164, 170, 1295, 1610 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 752 |
| AoxI | GGCC | 3 cut(s) | 724, 1252, 1552 |
| ApeKI | GCWGC | 5 cut(s) | 367, 370, 1204, 1244, 1729 |
| ApoI | RAATTY | 4 cut(s) | 670, 1071, 1105, 1576 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 430, 1185 |
| AspA2I | CCTAGG | 2 cut(s) | 277, 1283 |
| AspS9I | GGNCC | 5 cut(s) | 548, 1252, 1492, 1552, 1723 |
| AsuHPI | GGTGA | 4 cut(s) | 28, 110, 1272, 1579 |
| AvaII | GGWCC | 3 cut(s) | 548, 1492, 1723 |
| AvrII | CCTAGG | 2 cut(s) | 277, 1283 |
| BauI | CACGAG | 1 cut(s) | 1344 |
| BbsI | GAAGAC | 1 cut(s) | 1704 |
| Bbv12I | GWGCWC | 1 cut(s) | 763 |
| BbvCI | CCTCAGC | 1 cut(s) | 745 |
| BbvI | GCAGC | 5 cut(s) | 354, 382, 1216, 1256, 1716 |
| BccI | CCATC | 5 cut(s) | 89, 134, 557, 989, 1322 |
| BciT130I | CCWGG | 3 cut(s) | 350, 1256, 1496 |
| BciVI | GTATCC | 1 cut(s) | 491 |
| BclI | TGATCA | 1 cut(s) | 289 |
| BcoDI | GTCTC | 3 cut(s) | 154, 920, 1599 |
| BfaI | CTAG | 4 cut(s) | 278, 1067, 1208, 1284 |
| BfmI | CTRYAG | 2 cut(s) | 368, 753 |
| BfuI | GTATCC | 1 cut(s) | 491 |
| BglII | AGATCT | 1 cut(s) | 1196 |
| BisI | GCNGC | 5 cut(s) | 368, 371, 1205, 1245, 1730 |
| BlnI | CCTAGG | 2 cut(s) | 277, 1283 |
| BlsI | GCNGC | 5 cut(s) | 369, 372, 1206, 1246, 1731 |
| Bme1390I | CCNGG | 3 cut(s) | 350, 1256, 1496 |
| Bme18I | GGWCC | 3 cut(s) | 548, 1492, 1723 |
| BmgT120I | GGNCC | 5 cut(s) | 548, 1252, 1492, 1552, 1723 |
| BmiI | GGNNCC | 2 cut(s) | 1434, 1493 |
| BmrFI | CCNGG | 3 cut(s) | 350, 1256, 1496 |
| BmrI | ACTGGG | 4 cut(s) | 408, 503, 1222, 1755 |
| BmsI | GCATC | 9 cut(s) | 153, 576, 872, 1099, 1207, 1276, 1522, 1544, 1642 |
| BmuI | ACTGGG | 4 cut(s) | 408, 503, 1222, 1755 |
| BpiI | GAAGAC | 1 cut(s) | 1704 |
| BpmI | CTGGAG | 1 cut(s) | 1419 |
| Bpu10I | CCTNAGC | 1 cut(s) | 745 |
| BpuEI | CTTGAG | 4 cut(s) | 253, 418, 1358, 1523 |
| BsaBI | GATNNNNATC | 3 cut(s) | 174, 999, 1332 |
| BsaI | GGTCTC | 1 cut(s) | 154 |
| BsaJI | CCNNGG | 4 cut(s) | 277, 349, 1283, 1590 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 278, 494, 563, 1596, 1716 |
| Bse118I | RCCGGY | 1 cut(s) | 726 |
| Bse1I | ACTGG | 4 cut(s) | 414, 498, 1217, 1761 |
| Bse3DI | GCAATG | 2 cut(s) | 849, 993 |
| Bse8I | GATNNNNATC | 3 cut(s) | 174, 999, 1332 |
| BseBI | CCWGG | 3 cut(s) | 350, 1256, 1496 |
| BseDI | CCNNGG | 4 cut(s) | 277, 349, 1283, 1590 |
| BseGI | GGATG | 5 cut(s) | 144, 567, 853, 997, 1222 |
| BseJI | GATNNNNATC | 3 cut(s) | 174, 999, 1332 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 278, 494, 563, 1596, 1716 |
| BseMI | GCAATG | 2 cut(s) | 849, 993 |
| BseMII | CTCAG | 5 cut(s) | 461, 702, 759, 1191, 1731 |
| BseNI | ACTGG | 4 cut(s) | 414, 498, 1217, 1761 |
| BseX3I | CGGCCG | 1 cut(s) | 724 |
| BseXI | GCAGC | 5 cut(s) | 354, 382, 1216, 1256, 1716 |
| Bsh1236I | CGCG | 1 cut(s) | 527 |
| Bsh1285I | CGRYCG | 2 cut(s) | 727, 1526 |
| BshFI | GGCC | 3 cut(s) | 726, 1254, 1554 |
| BsiEI | CGRYCG | 2 cut(s) | 727, 1526 |
| BsiHKAI | GWGCWC | 1 cut(s) | 763 |
| BsiSI | CCGG | 2 cut(s) | 723, 727 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 278, 494, 563, 1596, 1716 |
| BsmAI | GTCTC | 3 cut(s) | 154, 920, 1599 |
| BsnI | GGCC | 3 cut(s) | 726, 1254, 1554 |
| Bso31I | GGTCTC | 1 cut(s) | 154 |
| Bsp1286I | GDGCHC | 1 cut(s) | 763 |
| Bsp1407I | TGTACA | 2 cut(s) | 359, 975 |
| Bsp143I | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| BspACI | CCGC | 4 cut(s) | 402, 618, 705, 1619 |
| BspANI | GGCC | 3 cut(s) | 726, 1254, 1554 |
| BspCNI | CTCAG | 5 cut(s) | 462, 701, 758, 1192, 1732 |
| BspFNI | CGCG | 1 cut(s) | 527 |
| BspHI | TCATGA | 1 cut(s) | 1270 |
| BspLI | GGNNCC | 2 cut(s) | 1434, 1493 |
| BspMAI | CTGCAG | 1 cut(s) | 372 |
| BspPI | GGATC | 4 cut(s) | 164, 170, 1295, 1610 |
| BspQI | GCTCTTC | 2 cut(s) | 315, 1191 |
| BspTNI | GGTCTC | 1 cut(s) | 154 |
| BsrBI | CCGCTC | 1 cut(s) | 402 |
| BsrDI | GCAATG | 2 cut(s) | 849, 993 |
| BsrFI | RCCGGY | 1 cut(s) | 726 |
| BsrGI | TGTACA | 2 cut(s) | 359, 975 |
| BsrI | ACTGG | 4 cut(s) | 414, 498, 1217, 1761 |
| BssAI | RCCGGY | 1 cut(s) | 726 |
| BssECI | CCNNGG | 4 cut(s) | 277, 349, 1283, 1590 |
| BssMI | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| BssSI | CACGAG | 1 cut(s) | 1344 |
| BssT1I | CCWWGG | 2 cut(s) | 277, 1283 |
| Bst2BI | CACGAG | 1 cut(s) | 1344 |
| Bst2UI | CCWGG | 3 cut(s) | 350, 1256, 1496 |
| Bst4CI | ACNGT | 6 cut(s) | 67, 558, 754, 830, 973, 1374 |
| Bst6I | CTCTTC | 3 cut(s) | 315, 904, 1191 |
| BstAUI | TGTACA | 2 cut(s) | 359, 975 |
| BstC8I | GCNNGC | 4 cut(s) | 728, 984, 1222, 1638 |
| BstDEI | CTNAG | 7 cut(s) | 448, 470, 688, 745, 1099, 1200, 1740 |
| BstEII | GGTNACC | 1 cut(s) | 1585 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 276 |
| BstF5I | GGATG | 5 cut(s) | 144, 567, 853, 997, 1222 |
| BstFNI | CGCG | 1 cut(s) | 527 |
| BstKTI | GATC | 8 cut(s) | 172, 178, 292, 1048, 1149, 1199, 1290, 1618 |
| BstMAI | GTCTC | 3 cut(s) | 154, 920, 1599 |
| BstMBI | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| BstMCI | CGRYCG | 2 cut(s) | 727, 1526 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 292 |
| BstNI | CCWGG | 3 cut(s) | 350, 1256, 1496 |
| BstNSI | RCATGY | 1 cut(s) | 10 |
| BstPI | GGTNACC | 1 cut(s) | 1585 |
| BstSCI | CCNGG | 3 cut(s) | 348, 1254, 1494 |
| BstSFI | CTRYAG | 2 cut(s) | 368, 753 |
| BstUI | CGCG | 1 cut(s) | 527 |
| BstV1I | GCAGC | 5 cut(s) | 354, 382, 1216, 1256, 1716 |
| BstV2I | GAAGAC | 1 cut(s) | 1704 |
| BstX2I | RGATCY | 2 cut(s) | 169, 1196 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 186, 421, 1375 |
| BstYI | RGATCY | 2 cut(s) | 169, 1196 |
| BstZI | CGGCCG | 1 cut(s) | 724 |
| BsuI | GTATCC | 1 cut(s) | 491 |
| BsuRI | GGCC | 3 cut(s) | 726, 1254, 1554 |
| BtgZI | GCGATG | 1 cut(s) | 1076 |
| BtsCI | GGATG | 5 cut(s) | 144, 567, 853, 997, 1222 |
| BtsI | GCAGTG | 2 cut(s) | 761, 1628 |
| BtsIMutI | CAGTG | 8 cut(s) | 72, 161, 421, 491, 761, 978, 1628, 1768 |
| Cac8I | GCNNGC | 4 cut(s) | 728, 984, 1222, 1638 |
| CaiI | CAGNNNCTG | 1 cut(s) | 752 |
| CciI | TCATGA | 1 cut(s) | 1270 |
| Cfr10I | RCCGGY | 1 cut(s) | 726 |
| Cfr13I | GGNCC | 5 cut(s) | 548, 1252, 1492, 1552, 1723 |
| CseI | GACGC | 1 cut(s) | 516 |
| Csp6I | GTAC | 2 cut(s) | 360, 976 |
| CviAII | CATG | 7 cut(s) | 7, 180, 781, 881, 1271, 1711, 1755 |
| CviQI | GTAC | 2 cut(s) | 360, 976 |
| DdeI | CTNAG | 7 cut(s) | 448, 470, 688, 745, 1099, 1200, 1740 |
| DpnI | GATC | 8 cut(s) | 171, 177, 291, 1047, 1148, 1198, 1289, 1617 |
| DpnII | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| DraIII | CACNNNGTG | 1 cut(s) | 1720 |
| EaeI | YGGCCR | 1 cut(s) | 724 |
| EagI | CGGCCG | 1 cut(s) | 724 |
| Eam1104I | CTCTTC | 3 cut(s) | 315, 904, 1191 |
| EarI | CTCTTC | 3 cut(s) | 315, 904, 1191 |
| EciI | GGCGGA | 1 cut(s) | 720 |
| EclXI | CGGCCG | 1 cut(s) | 724 |
| Eco130I | CCWWGG | 2 cut(s) | 277, 1283 |
| Eco31I | GGTCTC | 1 cut(s) | 154 |
| Eco47I | GGWCC | 3 cut(s) | 548, 1492, 1723 |
| Eco52I | CGGCCG | 1 cut(s) | 724 |
| Eco57I | CTGAAG | 3 cut(s) | 100, 137, 327 |
| Eco91I | GGTNACC | 1 cut(s) | 1585 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 276 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1252, 1492, 1552 |
| EcoO65I | GGTNACC | 1 cut(s) | 1585 |
| EcoRII | CCWGG | 3 cut(s) | 348, 1254, 1494 |
| EcoT14I | CCWWGG | 2 cut(s) | 277, 1283 |
| EcoT22I | ATGCAT | 1 cut(s) | 1537 |
| ErhI | CCWWGG | 2 cut(s) | 277, 1283 |
| FaeI | CATG | 7 cut(s) | 10, 183, 784, 884, 1274, 1714, 1758 |
| FatI | CATG | 7 cut(s) | 6, 179, 780, 880, 1270, 1710, 1754 |
| FauI | CCCGC | 1 cut(s) | 611 |
| FbaI | TGATCA | 1 cut(s) | 289 |
| Fnu4HI | GCNGC | 5 cut(s) | 368, 371, 1205, 1245, 1730 |
| FokI | GGATG | 5 cut(s) | 131, 554, 860, 1004, 1229 |
| Fsp4HI | GCNGC | 5 cut(s) | 368, 371, 1205, 1245, 1730 |
| FspBI | CTAG | 4 cut(s) | 278, 1067, 1208, 1284 |
| GluI | GCNGC | 5 cut(s) | 368, 371, 1205, 1245, 1730 |
| GsuI | CTGGAG | 1 cut(s) | 1419 |
| HaeIII | GGCC | 3 cut(s) | 726, 1254, 1554 |
| HapII | CCGG | 2 cut(s) | 723, 727 |
| HgaI | GACGC | 1 cut(s) | 516 |
| Hin1II | CATG | 7 cut(s) | 10, 183, 784, 884, 1274, 1714, 1758 |
| HindIII | AAGCTT | 4 cut(s) | 112, 284, 428, 980 |
| HinfI | GANTC | 5 cut(s) | 235, 1362, 1388, 1736, 1775 |
| HpaII | CCGG | 2 cut(s) | 723, 727 |
| HphI | GGTGA | 4 cut(s) | 28, 110, 1272, 1579 |
| Hpy166II | GTNNAC | 4 cut(s) | 70, 362, 821, 976 |
| Hpy8I | GTNNAC | 4 cut(s) | 70, 362, 821, 976 |
| Hpy99I | CGWCG | 1 cut(s) | 1405 |
| HpyAV | CCTTC | 6 cut(s) | 158, 351, 702, 851, 1543, 1622 |
| HpyCH4III | ACNGT | 6 cut(s) | 67, 558, 754, 830, 973, 1374 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 292 |
| HpyF3I | CTNAG | 7 cut(s) | 448, 470, 688, 745, 1099, 1200, 1740 |
| Hsp92II | CATG | 7 cut(s) | 10, 183, 784, 884, 1274, 1714, 1758 |
| KroI | GCCGGC | 1 cut(s) | 726 |
| KroNI | GCCGGC | 1 cut(s) | 728 |
| Ksp22I | TGATCA | 1 cut(s) | 289 |
| Kzo9I | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| LguI | GCTCTTC | 2 cut(s) | 315, 1191 |
| LmnI | GCTCC | 5 cut(s) | 670, 758, 1063, 1241, 1438 |
| Lsp1109I | GCAGC | 5 cut(s) | 354, 382, 1216, 1256, 1716 |
| LweI | GCATC | 9 cut(s) | 153, 576, 872, 1099, 1207, 1276, 1522, 1544, 1642 |
| MaeI | CTAG | 4 cut(s) | 278, 1067, 1208, 1284 |
| MaeIII | GTNAC | 5 cut(s) | 461, 489, 514, 1585, 1763 |
| MalI | GATC | 8 cut(s) | 171, 177, 291, 1047, 1148, 1198, 1289, 1617 |
| MbiI | CCGCTC | 1 cut(s) | 402 |
| MboI | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| MboII | GAAGA | 9 cut(s) | 143, 179, 302, 724, 891, 1178, 1397, 1677, 1709 |
| MfeI | CAATTG | 1 cut(s) | 867 |
| MflI | RGATCY | 2 cut(s) | 169, 1196 |
| MhlI | GDGCHC | 1 cut(s) | 763 |
| MluI | ACGCGT | 1 cut(s) | 525 |
| MlyI | GAGTC | 2 cut(s) | 244, 1356 |
| MmeI | TCCRAC | 4 cut(s) | 483, 526, 580, 1356 |
| Mph1103I | ATGCAT | 1 cut(s) | 1537 |
| MroNI | GCCGGC | 1 cut(s) | 726 |
| MroXI | GAANNNNTTC | 2 cut(s) | 430, 1185 |
| MseI | TTAA | 4 cut(s) | 110, 915, 1574, 1789 |
| MspA1I | CMGCKG | 2 cut(s) | 367, 1729 |
| MspI | CCGG | 2 cut(s) | 723, 727 |
| MspR9I | CCNGG | 3 cut(s) | 350, 1256, 1496 |
| MunI | CAATTG | 1 cut(s) | 867 |
| MvaI | CCWGG | 3 cut(s) | 350, 1256, 1496 |
| MvnI | CGCG | 1 cut(s) | 527 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 292 |
| NaeI | GCCGGC | 1 cut(s) | 728 |
| NdeII | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| NgoMIV | GCCGGC | 1 cut(s) | 726 |
| NlaIII | CATG | 7 cut(s) | 10, 183, 784, 884, 1274, 1714, 1758 |
| NlaIV | GGNNCC | 2 cut(s) | 1434, 1493 |
| NmuCI | GTSAC | 3 cut(s) | 489, 1585, 1763 |
| NsiI | ATGCAT | 1 cut(s) | 1537 |
| NspI | RCATGY | 1 cut(s) | 10 |
| PagI | TCATGA | 1 cut(s) | 1270 |
| PciSI | GCTCTTC | 2 cut(s) | 315, 1191 |
| PdiI | GCCGGC | 1 cut(s) | 728 |
| PdmI | GAANNNNTTC | 2 cut(s) | 430, 1185 |
| PfeI | GAWTC | 3 cut(s) | 1388, 1736, 1775 |
| PkrI | GCNGC | 5 cut(s) | 369, 372, 1206, 1246, 1731 |
| PleI | GAGTC | 2 cut(s) | 243, 1356 |
| PpsI | GAGTC | 2 cut(s) | 243, 1356 |
| PpuMI | RGGWCCY | 1 cut(s) | 1492 |
| PsiI | TTATAA | 1 cut(s) | 1235 |
| Psp5II | RGGWCCY | 1 cut(s) | 1492 |
| Psp6I | CCWGG | 3 cut(s) | 348, 1254, 1494 |
| PspEI | GGTNACC | 1 cut(s) | 1585 |
| PspGI | CCWGG | 3 cut(s) | 348, 1254, 1494 |
| PspN4I | GGNNCC | 2 cut(s) | 1434, 1493 |
| PspPI | GGNCC | 5 cut(s) | 548, 1252, 1492, 1552, 1723 |
| PspPPI | RGGWCCY | 1 cut(s) | 1492 |
| PstI | CTGCAG | 1 cut(s) | 372 |
| PstNI | CAGNNNCTG | 1 cut(s) | 752 |
| PsuI | RGATCY | 2 cut(s) | 169, 1196 |
| PvuII | CAGCTG | 2 cut(s) | 367, 1729 |
| RsaI | GTAC | 2 cut(s) | 361, 977 |
| RsaNI | GTAC | 2 cut(s) | 360, 976 |
| SapI | GCTCTTC | 2 cut(s) | 315, 1191 |
| SaqAI | TTAA | 4 cut(s) | 110, 915, 1574, 1789 |
| SatI | GCNGC | 5 cut(s) | 368, 371, 1205, 1245, 1730 |
| Sau3AI | GATC | 8 cut(s) | 169, 175, 289, 1045, 1146, 1196, 1287, 1615 |
| Sau96I | GGNCC | 5 cut(s) | 548, 1252, 1492, 1552, 1723 |
| SchI | GAGTC | 2 cut(s) | 244, 1356 |
| ScrFI | CCNGG | 3 cut(s) | 350, 1256, 1496 |
| SduI | GDGCHC | 1 cut(s) | 763 |
| SfaNI | GCATC | 9 cut(s) | 153, 576, 872, 1099, 1207, 1276, 1522, 1544, 1642 |
| SfcI | CTRYAG | 2 cut(s) | 368, 753 |
| SinI | GGWCC | 3 cut(s) | 548, 1492, 1723 |
| SmlI | CTYRAG | 4 cut(s) | 232, 397, 1337, 1502 |
| SmoI | CTYRAG | 4 cut(s) | 232, 397, 1337, 1502 |
| SsiI | CCGC | 4 cut(s) | 402, 618, 705, 1619 |
| SspI | AATATT | 3 cut(s) | 511, 1231, 1318 |
| SspMI | CTAG | 4 cut(s) | 278, 1067, 1208, 1284 |
| StyD4I | CCNGG | 3 cut(s) | 348, 1254, 1494 |
| StyI | CCWWGG | 2 cut(s) | 277, 1283 |
| TaaI | ACNGT | 6 cut(s) | 67, 558, 754, 830, 973, 1374 |
| TaqI | TCGA | 3 cut(s) | 1176, 1297, 1310 |
| TaqII | GACCGA | 2 cut(s) | 1540, 1716 |
| TatI | WGTACW | 2 cut(s) | 359, 975 |
| TfiI | GAWTC | 3 cut(s) | 1388, 1736, 1775 |
| Tru1I | TTAA | 4 cut(s) | 110, 915, 1574, 1789 |
| Tru9I | TTAA | 4 cut(s) | 110, 915, 1574, 1789 |
| TscAI | CASTG | 8 cut(s) | 72, 161, 421, 498, 768, 978, 1628, 1768 |
| TseFI | GTSAC | 3 cut(s) | 489, 1585, 1763 |
| TseI | GCWGC | 5 cut(s) | 367, 370, 1204, 1244, 1729 |
| Tsp45I | GTSAC | 3 cut(s) | 489, 1585, 1763 |
| TspDTI | ATGAA | 5 cut(s) | 302, 869, 1046, 1194, 1531 |
| TspGWI | ACGGA | 1 cut(s) | 477 |
| TspRI | CASTG | 8 cut(s) | 72, 161, 421, 498, 768, 978, 1628, 1768 |
| VpaK11BI | GGWCC | 3 cut(s) | 548, 1492, 1723 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 276 |
| XapI | RAATTY | 4 cut(s) | 670, 1071, 1105, 1576 |
| XceI | RCATGY | 1 cut(s) | 10 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1717 |
| XmaJI | CCTAGG | 2 cut(s) | 277, 1283 |
| XmnI | GAANNNNTTC | 2 cut(s) | 430, 1185 |
| XspI | CTAG | 4 cut(s) | 278, 1067, 1208, 1284 |
| Zsp2I | ATGCAT | 1 cut(s) | 1537 |