Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 192 - 313 | 6.3e-16 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 728 |
| Acc36I | ACCTGC | 1 cut(s) | 728 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 112 |
| AccI | GTMKAC | 1 cut(s) | 806 |
| AciI | CCGC | 1 cut(s) | 436 |
| AclWI | GGATC | 3 cut(s) | 60, 239, 252 |
| AcsI | RAATTY | 1 cut(s) | 634 |
| AfaI | GTAC | 5 cut(s) | 223, 317, 799, 835, 978 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 76, 112, 241, 557, 766 |
| AgsI | TTSAA | 5 cut(s) | 365, 493, 568, 704, 994 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 560, 592 |
| AluBI | AGCT | 4 cut(s) | 82, 169, 330, 713 |
| AluI | AGCT | 4 cut(s) | 82, 169, 330, 713 |
| Alw26I | GTCTC | 2 cut(s) | 444, 671 |
| AlwI | GGATC | 3 cut(s) | 60, 239, 252 |
| ApeKI | GCWGC | 1 cut(s) | 61 |
| ApoI | RAATTY | 1 cut(s) | 634 |
| AseI | ATTAAT | 1 cut(s) | 957 |
| AsuHPI | GGTGA | 3 cut(s) | 224, 637, 752 |
| AsuII | TTCGAA | 1 cut(s) | 448 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 825, 858 |
| BamHI | GGATCC | 1 cut(s) | 244 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 966, 998 |
| BbvI | GCAGC | 1 cut(s) | 48 |
| BccI | CCATC | 1 cut(s) | 575 |
| BcoDI | GTCTC | 2 cut(s) | 444, 671 |
| BfaI | CTAG | 3 cut(s) | 258, 389, 714 |
| BfmI | CTRYAG | 1 cut(s) | 807 |
| BfuAI | ACCTGC | 1 cut(s) | 728 |
| BisI | GCNGC | 1 cut(s) | 62 |
| BlsI | GCNGC | 1 cut(s) | 63 |
| BmcAI | AGTACT | 1 cut(s) | 223 |
| BmiI | GGNNCC | 1 cut(s) | 246 |
| BmrI | ACTGGG | 1 cut(s) | 100 |
| BmsI | GCATC | 2 cut(s) | 336, 631 |
| BmuI | ACTGGG | 1 cut(s) | 100 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 424, 456 |
| Bpu14I | TTCGAA | 1 cut(s) | 448 |
| BpuEI | CTTGAG | 1 cut(s) | 630 |
| BsaI | GGTCTC | 1 cut(s) | 444 |
| BsaJI | CCNNGG | 2 cut(s) | 248, 263 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 71, 101, 535, 565 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 76, 112, 241, 557, 766 |
| Bse118I | RCCGGY | 1 cut(s) | 283 |
| Bse1I | ACTGG | 2 cut(s) | 20, 106 |
| BseDI | CCNNGG | 2 cut(s) | 248, 263 |
| BseGI | GGATG | 4 cut(s) | 272, 402, 547, 586 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 76, 112, 241, 557, 766 |
| BseMII | CTCAG | 3 cut(s) | 270, 479, 682 |
| BseNI | ACTGG | 2 cut(s) | 20, 106 |
| BseXI | GCAGC | 1 cut(s) | 48 |
| BsiSI | CCGG | 1 cut(s) | 284 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 76, 112, 241, 557, 766 |
| BsmAI | GTCTC | 2 cut(s) | 444, 671 |
| Bso31I | GGTCTC | 1 cut(s) | 444 |
| Bsp119I | TTCGAA | 1 cut(s) | 448 |
| Bsp143I | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| BspACI | CCGC | 1 cut(s) | 436 |
| BspCNI | CTCAG | 3 cut(s) | 271, 478, 681 |
| BspLI | GGNNCC | 1 cut(s) | 246 |
| BspMI | ACCTGC | 1 cut(s) | 728 |
| BspPI | GGATC | 3 cut(s) | 60, 239, 252 |
| BspQI | GCTCTTC | 1 cut(s) | 111 |
| BspT104I | TTCGAA | 1 cut(s) | 448 |
| BspTNI | GGTCTC | 1 cut(s) | 444 |
| BsrFI | RCCGGY | 1 cut(s) | 283 |
| BsrI | ACTGG | 2 cut(s) | 20, 106 |
| BssAI | RCCGGY | 1 cut(s) | 283 |
| BssECI | CCNNGG | 2 cut(s) | 248, 263 |
| BssMI | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| BssT1I | CCWWGG | 1 cut(s) | 248 |
| Bst4CI | ACNGT | 1 cut(s) | 949 |
| Bst6I | CTCTTC | 2 cut(s) | 111, 156 |
| BstBI | TTCGAA | 1 cut(s) | 448 |
| BstC8I | GCNNGC | 2 cut(s) | 123, 727 |
| BstDEI | CTNAG | 5 cut(s) | 225, 279, 465, 668, 697 |
| BstEII | GGTNACC | 1 cut(s) | 252 |
| BstF5I | GGATG | 4 cut(s) | 272, 402, 547, 586 |
| BstKTI | GATC | 4 cut(s) | 68, 188, 247, 1027 |
| BstMAI | GTCTC | 2 cut(s) | 444, 671 |
| BstMBI | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 289, 336, 433 |
| BstNSI | RCATGY | 1 cut(s) | 125 |
| BstPI | GGTNACC | 1 cut(s) | 252 |
| BstSFI | CTRYAG | 1 cut(s) | 807 |
| BstV1I | GCAGC | 1 cut(s) | 48 |
| BstX2I | RGATCY | 1 cut(s) | 244 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 561 |
| BstYI | RGATCY | 1 cut(s) | 244 |
| BtsCI | GGATG | 4 cut(s) | 272, 402, 547, 586 |
| BtsIMutI | CAGTG | 1 cut(s) | 276 |
| BveI | ACCTGC | 1 cut(s) | 728 |
| Cac8I | GCNNGC | 2 cut(s) | 123, 727 |
| Cfr10I | RCCGGY | 1 cut(s) | 283 |
| Csp6I | GTAC | 5 cut(s) | 222, 316, 798, 834, 977 |
| CviAII | CATG | 2 cut(s) | 122, 893 |
| CviQI | GTAC | 5 cut(s) | 222, 316, 798, 834, 977 |
| DdeI | CTNAG | 5 cut(s) | 225, 279, 465, 668, 697 |
| DpnI | GATC | 4 cut(s) | 67, 187, 246, 1026 |
| DpnII | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| DraI | TTTAAA | 1 cut(s) | 693 |
| Eam1104I | CTCTTC | 2 cut(s) | 111, 156 |
| EarI | CTCTTC | 2 cut(s) | 111, 156 |
| Eco130I | CCWWGG | 1 cut(s) | 248 |
| Eco31I | GGTCTC | 1 cut(s) | 444 |
| Eco32I | GATATC | 1 cut(s) | 850 |
| Eco91I | GGTNACC | 1 cut(s) | 252 |
| EcoO65I | GGTNACC | 1 cut(s) | 252 |
| EcoRV | GATATC | 1 cut(s) | 850 |
| EcoT14I | CCWWGG | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 248 |
| FaeI | CATG | 2 cut(s) | 125, 896 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 846, 878 |
| FatI | CATG | 2 cut(s) | 121, 892 |
| FblI | GTMKAC | 1 cut(s) | 806 |
| Fnu4HI | GCNGC | 1 cut(s) | 62 |
| FokI | GGATG | 4 cut(s) | 259, 389, 534, 593 |
| Fsp4HI | GCNGC | 1 cut(s) | 62 |
| FspBI | CTAG | 3 cut(s) | 258, 389, 714 |
| GluI | GCNGC | 1 cut(s) | 62 |
| HapII | CCGG | 1 cut(s) | 284 |
| Hin1II | CATG | 2 cut(s) | 125, 896 |
| HincII | GTYRAC | 1 cut(s) | 96 |
| HindII | GTYRAC | 1 cut(s) | 96 |
| HinfI | GANTC | 6 cut(s) | 37, 469, 544, 770, 821, 905 |
| HpaII | CCGG | 1 cut(s) | 284 |
| HphI | GGTGA | 3 cut(s) | 224, 637, 752 |
| Hpy166II | GTNNAC | 2 cut(s) | 96, 807 |
| Hpy188I | TCNGA | 6 cut(s) | 407, 468, 640, 671, 775, 826 |
| Hpy188III | TCNNGA | 2 cut(s) | 322, 508 |
| Hpy8I | GTNNAC | 2 cut(s) | 96, 807 |
| HpyAV | CCTTC | 3 cut(s) | 235, 885, 992 |
| HpyCH4III | ACNGT | 1 cut(s) | 949 |
| HpyCH4IV | ACGT | 1 cut(s) | 309 |
| HpyCH4V | TGCA | 1 cut(s) | 125 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 289, 336, 433 |
| HpyF3I | CTNAG | 5 cut(s) | 225, 279, 465, 668, 697 |
| HpySE526I | ACGT | 1 cut(s) | 309 |
| Hsp92II | CATG | 2 cut(s) | 125, 896 |
| Kzo9I | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| LguI | GCTCTTC | 1 cut(s) | 111 |
| LmnI | GCTCC | 2 cut(s) | 79, 584 |
| LpnPI | CCDG | 8 cut(s) | 119, 223, 297, 318, 321, 588, 723, 952 |
| Lsp1109I | GCAGC | 1 cut(s) | 48 |
| LweI | GCATC | 2 cut(s) | 336, 631 |
| MaeI | CTAG | 3 cut(s) | 258, 389, 714 |
| MaeII | ACGT | 1 cut(s) | 309 |
| MaeIII | GTNAC | 2 cut(s) | 252, 1015 |
| MalI | GATC | 4 cut(s) | 67, 187, 246, 1026 |
| MboI | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| MboII | GAAGA | 8 cut(s) | 58, 128, 173, 223, 462, 857, 870, 982 |
| MfeI | CAATTG | 2 cut(s) | 394, 555 |
| MflI | RGATCY | 1 cut(s) | 244 |
| MlyI | GAGTC | 1 cut(s) | 538 |
| MnlI | CCTC | 9 cut(s) | 151, 258, 426, 561, 602, 650, 711, 811, 1017 |
| MseI | TTAA | 5 cut(s) | 288, 684, 692, 792, 957 |
| MslI | CAYNNNNRTG | 1 cut(s) | 344 |
| MspI | CCGG | 1 cut(s) | 284 |
| MunI | CAATTG | 2 cut(s) | 394, 555 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 289, 336, 433 |
| NdeII | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| NlaIII | CATG | 2 cut(s) | 125, 896 |
| NlaIV | GGNNCC | 1 cut(s) | 246 |
| NspI | RCATGY | 1 cut(s) | 125 |
| NspV | TTCGAA | 1 cut(s) | 448 |
| PaeI | GCATGC | 1 cut(s) | 125 |
| PaqCI | CACCTGC | 1 cut(s) | 728 |
| PciSI | GCTCTTC | 1 cut(s) | 111 |
| PfeI | GAWTC | 5 cut(s) | 37, 469, 770, 821, 905 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 112 |
| PkrI | GCNGC | 1 cut(s) | 63 |
| PleI | GAGTC | 1 cut(s) | 538 |
| PpsI | GAGTC | 1 cut(s) | 538 |
| PshBI | ATTAAT | 1 cut(s) | 957 |
| PspEI | GGTNACC | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 1 cut(s) | 246 |
| PsuI | RGATCY | 1 cut(s) | 244 |
| RsaI | GTAC | 5 cut(s) | 223, 317, 799, 835, 978 |
| RsaNI | GTAC | 5 cut(s) | 222, 316, 798, 834, 977 |
| RseI | CAYNNNNRTG | 1 cut(s) | 344 |
| SapI | GCTCTTC | 1 cut(s) | 111 |
| SaqAI | TTAA | 5 cut(s) | 288, 684, 692, 792, 957 |
| SatI | GCNGC | 1 cut(s) | 62 |
| Sau3AI | GATC | 4 cut(s) | 65, 185, 244, 1024 |
| ScaI | AGTACT | 1 cut(s) | 223 |
| SchI | GAGTC | 1 cut(s) | 538 |
| SfaNI | GCATC | 2 cut(s) | 336, 631 |
| SfcI | CTRYAG | 1 cut(s) | 807 |
| SfuI | TTCGAA | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 344 |
| SmlI | CTYRAG | 1 cut(s) | 645 |
| SmoI | CTYRAG | 1 cut(s) | 645 |
| SphI | GCATGC | 1 cut(s) | 125 |
| SsiI | CCGC | 1 cut(s) | 436 |
| SspMI | CTAG | 3 cut(s) | 258, 389, 714 |
| StyI | CCWWGG | 1 cut(s) | 248 |
| TaaI | ACNGT | 1 cut(s) | 949 |
| TaiI | ACGT | 1 cut(s) | 312 |
| TaqI | TCGA | 3 cut(s) | 323, 448, 747 |
| TaqII | GACCGA | 1 cut(s) | 277 |
| TatI | WGTACW | 1 cut(s) | 221 |
| TfiI | GAWTC | 5 cut(s) | 37, 469, 770, 821, 905 |
| Tru1I | TTAA | 5 cut(s) | 288, 684, 692, 792, 957 |
| Tru9I | TTAA | 5 cut(s) | 288, 684, 692, 792, 957 |
| TscAI | CASTG | 1 cut(s) | 283 |
| TseI | GCWGC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 3 cut(s) | 261, 391, 461 |
| TspRI | CASTG | 1 cut(s) | 283 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 112 |
| VspI | ATTAAT | 1 cut(s) | 957 |
| XapI | RAATTY | 1 cut(s) | 634 |
| XceI | RCATGY | 1 cut(s) | 125 |
| XmiI | GTMKAC | 1 cut(s) | 806 |
| XspI | CTAG | 3 cut(s) | 258, 389, 714 |
| ZrmI | AGTACT | 1 cut(s) | 223 |