Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 2 cut(s) | 52, 169 |
| AclWI | GGATC | 2 cut(s) | 212, 225 |
| AcyI | GRCGYC | 1 cut(s) | 21 |
| AflIII | ACRYGT | 1 cut(s) | 39 |
| AgsI | TTSAA | 3 cut(s) | 101, 107, 296 |
| AjnI | CCWGG | 1 cut(s) | 251 |
| AluBI | AGCT | 1 cut(s) | 266 |
| AluI | AGCT | 1 cut(s) | 266 |
| Alw26I | GTCTC | 1 cut(s) | 118 |
| AlwI | GGATC | 2 cut(s) | 212, 225 |
| Aor13HI | TCCGGA | 2 cut(s) | 52, 169 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 1 cut(s) | 298 |
| BamHI | GGATCC | 1 cut(s) | 217 |
| BciT130I | CCWGG | 1 cut(s) | 253 |
| BcoDI | GTCTC | 1 cut(s) | 118 |
| BfaI | CTAG | 1 cut(s) | 143 |
| Bme1390I | CCNGG | 1 cut(s) | 253 |
| BmiI | GGNNCC | 1 cut(s) | 219 |
| BmrFI | CCNGG | 1 cut(s) | 253 |
| BmsI | GCATC | 2 cut(s) | 201, 243 |
| BsaAI | YACGTR | 1 cut(s) | 207 |
| BsaHI | GRCGYC | 1 cut(s) | 21 |
| BsaJI | CCNNGG | 1 cut(s) | 282 |
| BsaWI | WCCGGW | 2 cut(s) | 52, 169 |
| BseAI | TCCGGA | 2 cut(s) | 52, 169 |
| BseBI | CCWGG | 1 cut(s) | 253 |
| BseDI | CCNNGG | 1 cut(s) | 282 |
| BsgI | GTGCAG | 1 cut(s) | 302 |
| BsiSI | CCGG | 2 cut(s) | 53, 170 |
| BsmAI | GTCTC | 1 cut(s) | 118 |
| BsmBI | CGTCTC | 1 cut(s) | 118 |
| Bsp13I | TCCGGA | 2 cut(s) | 52, 169 |
| Bsp143I | GATC | 1 cut(s) | 217 |
| BspEI | TCCGGA | 2 cut(s) | 52, 169 |
| BspLI | GGNNCC | 1 cut(s) | 219 |
| BspPI | GGATC | 2 cut(s) | 212, 225 |
| BssECI | CCNNGG | 1 cut(s) | 282 |
| BssMI | GATC | 1 cut(s) | 217 |
| BssNI | GRCGYC | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 1 cut(s) | 282 |
| Bst2UI | CCWGG | 1 cut(s) | 253 |
| Bst4CI | ACNGT | 1 cut(s) | 186 |
| BstACI | GRCGYC | 1 cut(s) | 21 |
| BstBAI | YACGTR | 1 cut(s) | 207 |
| BstC8I | GCNNGC | 1 cut(s) | 317 |
| BstDEI | CTNAG | 1 cut(s) | 123 |
| BstKTI | GATC | 1 cut(s) | 220 |
| BstMAI | GTCTC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 217 |
| BstNI | CCWGG | 1 cut(s) | 253 |
| BstNSI | RCATGY | 2 cut(s) | 43, 315 |
| BstSCI | CCNGG | 1 cut(s) | 251 |
| BstSNI | TACGTA | 1 cut(s) | 207 |
| BstX2I | RGATCY | 1 cut(s) | 217 |
| BstYI | RGATCY | 1 cut(s) | 217 |
| Cac8I | GCNNGC | 1 cut(s) | 317 |
| CseI | GACGC | 1 cut(s) | 10 |
| CviAII | CATG | 4 cut(s) | 35, 40, 78, 312 |
| CviJI | RGCY | 2 cut(s) | 266, 281 |
| CviKI_1 | RGCY | 2 cut(s) | 266, 281 |
| DdeI | CTNAG | 1 cut(s) | 123 |
| DpnI | GATC | 1 cut(s) | 219 |
| DpnII | GATC | 1 cut(s) | 217 |
| Eco105I | TACGTA | 1 cut(s) | 207 |
| Eco130I | CCWWGG | 1 cut(s) | 282 |
| EcoRII | CCWGG | 1 cut(s) | 251 |
| EcoT14I | CCWWGG | 1 cut(s) | 282 |
| ErhI | CCWWGG | 1 cut(s) | 282 |
| Esp3I | CGTCTC | 1 cut(s) | 118 |
| FaeI | CATG | 4 cut(s) | 38, 43, 81, 315 |
| FaiI | YATR | 8 cut(s) | 36, 41, 79, 151, 210, 212, 225, 313 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 81, 113 |
| FatI | CATG | 4 cut(s) | 34, 39, 77, 311 |
| FspBI | CTAG | 1 cut(s) | 143 |
| HapII | CCGG | 2 cut(s) | 53, 170 |
| HgaI | GACGC | 1 cut(s) | 10 |
| Hin1I | GRCGYC | 1 cut(s) | 21 |
| Hin1II | CATG | 4 cut(s) | 38, 43, 81, 315 |
| HincII | GTYRAC | 1 cut(s) | 246 |
| HindII | GTYRAC | 1 cut(s) | 246 |
| HinfI | GANTC | 1 cut(s) | 94 |
| HpaII | CCGG | 2 cut(s) | 53, 170 |
| HphI | GGTGA | 1 cut(s) | 298 |
| Hpy166II | GTNNAC | 1 cut(s) | 246 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 246 |
| Hpy99I | CGWCG | 2 cut(s) | 26, 89 |
| HpyAV | CCTTC | 2 cut(s) | 83, 84 |
| HpyCH4III | ACNGT | 1 cut(s) | 186 |
| HpyCH4IV | ACGT | 2 cut(s) | 65, 206 |
| HpyCH4V | TGCA | 3 cut(s) | 178, 234, 319 |
| HpyF3I | CTNAG | 1 cut(s) | 123 |
| HpySE526I | ACGT | 2 cut(s) | 65, 206 |
| Hsp92I | GRCGYC | 1 cut(s) | 21 |
| Hsp92II | CATG | 4 cut(s) | 38, 43, 81, 315 |
| Kpn2I | TCCGGA | 2 cut(s) | 52, 169 |
| Kzo9I | GATC | 1 cut(s) | 217 |
| LmnI | GCTCC | 2 cut(s) | 31, 81 |
| LpnPI | CCDG | 6 cut(s) | 26, 66, 183, 238, 265, 276 |
| LweI | GCATC | 2 cut(s) | 201, 243 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MaeII | ACGT | 2 cut(s) | 65, 206 |
| MaeIII | GTNAC | 1 cut(s) | 304 |
| MalI | GATC | 1 cut(s) | 219 |
| MboI | GATC | 1 cut(s) | 217 |
| MboII | GAAGA | 4 cut(s) | 19, 89, 268, 284 |
| MflI | RGATCY | 1 cut(s) | 217 |
| MluCI | AATT | 1 cut(s) | 322 |
| MnlI | CCTC | 3 cut(s) | 49, 60, 166 |
| MroI | TCCGGA | 2 cut(s) | 52, 169 |
| MroXI | GAANNNNTTC | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 1 cut(s) | 266 |
| MspI | CCGG | 2 cut(s) | 53, 170 |
| MspR9I | CCNGG | 1 cut(s) | 253 |
| MvaI | CCWGG | 1 cut(s) | 253 |
| NdeII | GATC | 1 cut(s) | 217 |
| NlaIII | CATG | 4 cut(s) | 38, 43, 81, 315 |
| NlaIV | GGNNCC | 1 cut(s) | 219 |
| NmuCI | GTSAC | 1 cut(s) | 304 |
| NspI | RCATGY | 2 cut(s) | 43, 315 |
| PciI | ACATGT | 1 cut(s) | 39 |
| PdmI | GAANNNNTTC | 1 cut(s) | 93 |
| PfeI | GAWTC | 1 cut(s) | 94 |
| Ppu21I | YACGTR | 1 cut(s) | 207 |
| PscI | ACATGT | 1 cut(s) | 39 |
| Psp6I | CCWGG | 1 cut(s) | 251 |
| PspGI | CCWGG | 1 cut(s) | 251 |
| PspN4I | GGNNCC | 1 cut(s) | 219 |
| PsuI | RGATCY | 1 cut(s) | 217 |
| PvuII | CAGCTG | 1 cut(s) | 266 |
| Sau3AI | GATC | 1 cut(s) | 217 |
| ScrFI | CCNGG | 1 cut(s) | 253 |
| SetI | ASST | 7 cut(s) | 52, 60, 68, 144, 177, 209, 268 |
| SfaNI | GCATC | 2 cut(s) | 201, 243 |
| SnaBI | TACGTA | 1 cut(s) | 207 |
| Sse9I | AATT | 1 cut(s) | 322 |
| SspMI | CTAG | 1 cut(s) | 143 |
| StyD4I | CCNGG | 1 cut(s) | 251 |
| StyI | CCWWGG | 1 cut(s) | 282 |
| TaaI | ACNGT | 1 cut(s) | 186 |
| TaiI | ACGT | 2 cut(s) | 68, 209 |
| TaqI | TCGA | 1 cut(s) | 199 |
| TasI | AATT | 1 cut(s) | 322 |
| TfiI | GAWTC | 1 cut(s) | 94 |
| TseFI | GTSAC | 1 cut(s) | 304 |
| Tsp45I | GTSAC | 1 cut(s) | 304 |
| TspDTI | ATGAA | 1 cut(s) | 66 |
| XceI | RCATGY | 2 cut(s) | 43, 315 |
| XmnI | GAANNNNTTC | 1 cut(s) | 93 |
| XspI | CTAG | 1 cut(s) | 143 |