Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LOR | PF04525 | 8 - 78 | 1.2e-18 | LURP-one-related |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 69, 220 |
| AgsI | TTSAA | 3 cut(s) | 13, 49, 143 |
| AjnI | CCWGG | 1 cut(s) | 187 |
| AluBI | AGCT | 1 cut(s) | 63 |
| AluI | AGCT | 1 cut(s) | 63 |
| AlwI | GGATC | 2 cut(s) | 69, 220 |
| AseI | ATTAAT | 1 cut(s) | 240 |
| BccI | CCATC | 1 cut(s) | 116 |
| BciT130I | CCWGG | 1 cut(s) | 189 |
| Bme1390I | CCNGG | 1 cut(s) | 189 |
| BmiI | GGNNCC | 1 cut(s) | 68 |
| BmrFI | CCNGG | 1 cut(s) | 189 |
| BmsI | GCATC | 2 cut(s) | 212, 223 |
| Bse3DI | GCAATG | 2 cut(s) | 111, 207 |
| BseBI | CCWGG | 1 cut(s) | 189 |
| BseGI | GGATG | 1 cut(s) | 203 |
| BseMI | GCAATG | 2 cut(s) | 111, 207 |
| BseYI | CCCAGC | 1 cut(s) | 92 |
| BslFI | GGGAC | 1 cut(s) | 110 |
| BsmFI | GGGAC | 1 cut(s) | 110 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| Bsp143I | GATC | 2 cut(s) | 74, 225 |
| BspLI | GGNNCC | 1 cut(s) | 68 |
| BspPI | GGATC | 2 cut(s) | 69, 220 |
| BsrDI | GCAATG | 2 cut(s) | 111, 207 |
| BssMI | GATC | 2 cut(s) | 74, 225 |
| Bst2UI | CCWGG | 1 cut(s) | 189 |
| Bst4CI | ACNGT | 1 cut(s) | 139 |
| Bst6I | CTCTTC | 1 cut(s) | 106 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 209 |
| BstC8I | GCNNGC | 1 cut(s) | 65 |
| BstF5I | GGATG | 1 cut(s) | 203 |
| BstKTI | GATC | 2 cut(s) | 77, 228 |
| BstMBI | GATC | 2 cut(s) | 74, 225 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 209 |
| BstNI | CCWGG | 1 cut(s) | 189 |
| BstSCI | CCNGG | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 203 |
| Cac8I | GCNNGC | 1 cut(s) | 65 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 94, 129, 202, 237 |
| CviAII | CATG | 1 cut(s) | 172 |
| CviJI | RGCY | 2 cut(s) | 63, 67 |
| CviKI_1 | RGCY | 2 cut(s) | 63, 67 |
| DpnI | GATC | 2 cut(s) | 76, 227 |
| DpnII | GATC | 2 cut(s) | 74, 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 106 |
| EarI | CTCTTC | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 187 |
| EcoT22I | ATGCAT | 2 cut(s) | 126, 205 |
| FaeI | CATG | 1 cut(s) | 175 |
| FaiI | YATR | 7 cut(s) | 86, 88, 90, 126, 173, 184, 201 |
| FaqI | GGGAC | 1 cut(s) | 110 |
| FatI | CATG | 1 cut(s) | 171 |
| FokI | GGATG | 1 cut(s) | 190 |
| GsaI | CCCAGC | 1 cut(s) | 96 |
| Hin1II | CATG | 1 cut(s) | 175 |
| HinfI | GANTC | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 1 cut(s) | 179 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4III | ACNGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 2 cut(s) | 124, 203 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 209 |
| Hsp92II | CATG | 1 cut(s) | 175 |
| Kzo9I | GATC | 2 cut(s) | 74, 225 |
| LmnI | GCTCC | 1 cut(s) | 72 |
| LpnPI | CCDG | 6 cut(s) | 49, 54, 78, 91, 174, 201 |
| LweI | GCATC | 2 cut(s) | 212, 223 |
| MalI | GATC | 2 cut(s) | 76, 227 |
| MboI | GATC | 2 cut(s) | 74, 225 |
| MboII | GAAGA | 1 cut(s) | 93 |
| MluCI | AATT | 1 cut(s) | 166 |
| MlyI | GAGTC | 1 cut(s) | 92 |
| MmeI | TCCRAC | 1 cut(s) | 94 |
| MnlI | CCTC | 1 cut(s) | 92 |
| Mph1103I | ATGCAT | 2 cut(s) | 126, 205 |
| MseI | TTAA | 2 cut(s) | 54, 240 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspR9I | CCNGG | 1 cut(s) | 189 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| MvaI | CCWGG | 1 cut(s) | 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 209 |
| NdeII | GATC | 2 cut(s) | 74, 225 |
| NlaIII | CATG | 1 cut(s) | 175 |
| NlaIV | GGNNCC | 1 cut(s) | 68 |
| NsiI | ATGCAT | 2 cut(s) | 126, 205 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PleI | GAGTC | 1 cut(s) | 92 |
| PpsI | GAGTC | 1 cut(s) | 92 |
| PshBI | ATTAAT | 1 cut(s) | 240 |
| Psp6I | CCWGG | 1 cut(s) | 187 |
| PspFI | CCCAGC | 1 cut(s) | 92 |
| PspGI | CCWGG | 1 cut(s) | 187 |
| PspN4I | GGNNCC | 1 cut(s) | 68 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SaqAI | TTAA | 2 cut(s) | 54, 240 |
| Sau3AI | GATC | 2 cut(s) | 74, 225 |
| SchI | GAGTC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 1 cut(s) | 189 |
| SetI | ASST | 2 cut(s) | 54, 65 |
| SfaNI | GCATC | 2 cut(s) | 212, 223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| Sse9I | AATT | 1 cut(s) | 166 |
| StyD4I | CCNGG | 1 cut(s) | 187 |
| TaaI | ACNGT | 1 cut(s) | 139 |
| TasI | AATT | 1 cut(s) | 166 |
| Tru1I | TTAA | 2 cut(s) | 54, 240 |
| Tru9I | TTAA | 2 cut(s) | 54, 240 |
| TspDTI | ATGAA | 2 cut(s) | 47, 160 |
| VspI | ATTAAT | 1 cut(s) | 240 |
| Zsp2I | ATGCAT | 2 cut(s) | 126, 205 |