Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 72 |
| AjnI | CCWGG | 1 cut(s) | 10 |
| AluBI | AGCT | 4 cut(s) | 117, 156, 301, 313 |
| AluI | AGCT | 4 cut(s) | 117, 156, 301, 313 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| AoxI | GGCC | 2 cut(s) | 8, 63 |
| ApeKI | GCWGC | 2 cut(s) | 117, 301 |
| ApoI | RAATTY | 1 cut(s) | 290 |
| AspS9I | GGNCC | 1 cut(s) | 150 |
| AsuC2I | CCSGG | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 1 cut(s) | 177 |
| AvaII | GGWCC | 1 cut(s) | 150 |
| BauI | CACGAG | 1 cut(s) | 141 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BbvI | GCAGC | 2 cut(s) | 104, 288 |
| BciT130I | CCWGG | 1 cut(s) | 12 |
| BclI | TGATCA | 1 cut(s) | 22 |
| BcnI | CCSGG | 1 cut(s) | 38 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BisI | GCNGC | 2 cut(s) | 118, 302 |
| BlsI | GCNGC | 2 cut(s) | 119, 303 |
| Bme1390I | CCNGG | 2 cut(s) | 12, 38 |
| Bme18I | GGWCC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 1 cut(s) | 150 |
| BmrFI | CCNGG | 2 cut(s) | 12, 38 |
| BmrI | ACTGGG | 1 cut(s) | 237 |
| BmsI | GCATC | 1 cut(s) | 161 |
| BmuI | ACTGGG | 1 cut(s) | 237 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| BpuMI | CCSGG | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 1 cut(s) | 11 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 129, 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 72 |
| Bse1I | ACTGG | 2 cut(s) | 166, 232 |
| Bse3DI | GCAATG | 2 cut(s) | 198, 208 |
| BseBI | CCWGG | 1 cut(s) | 12 |
| BseDI | CCNNGG | 1 cut(s) | 11 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BseMI | GCAATG | 2 cut(s) | 198, 208 |
| BseMII | CTCAG | 1 cut(s) | 118 |
| BseNI | ACTGG | 2 cut(s) | 166, 232 |
| BseXI | GCAGC | 2 cut(s) | 104, 288 |
| BsgI | GTGCAG | 2 cut(s) | 103, 300 |
| BshFI | GGCC | 2 cut(s) | 10, 65 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BsiSI | CCGG | 1 cut(s) | 37 |
| BslFI | GGGAC | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BsmFI | GGGAC | 1 cut(s) | 269 |
| BsnI | GGCC | 2 cut(s) | 10, 65 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp143I | GATC | 1 cut(s) | 22 |
| BspANI | GGCC | 2 cut(s) | 10, 65 |
| BspCNI | CTCAG | 1 cut(s) | 117 |
| BsrDI | GCAATG | 2 cut(s) | 198, 208 |
| BsrI | ACTGG | 2 cut(s) | 166, 232 |
| BssECI | CCNNGG | 1 cut(s) | 11 |
| BssMI | GATC | 1 cut(s) | 22 |
| BssSI | CACGAG | 1 cut(s) | 141 |
| Bst2BI | CACGAG | 1 cut(s) | 141 |
| Bst2UI | CCWGG | 1 cut(s) | 12 |
| Bst4CI | ACNGT | 1 cut(s) | 189 |
| BstC8I | GCNNGC | 3 cut(s) | 94, 110, 266 |
| BstDEI | CTNAG | 1 cut(s) | 104 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstKTI | GATC | 1 cut(s) | 25 |
| BstMBI | GATC | 1 cut(s) | 22 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 114, 261, 310 |
| BstNI | CCWGG | 1 cut(s) | 12 |
| BstNSI | RCATGY | 2 cut(s) | 96, 112 |
| BstSCI | CCNGG | 2 cut(s) | 10, 36 |
| BstV1I | GCAGC | 2 cut(s) | 104, 288 |
| BsuRI | GGCC | 2 cut(s) | 10, 65 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 3 cut(s) | 94, 110, 266 |
| Cfr13I | GGNCC | 1 cut(s) | 150 |
| CviAII | CATG | 3 cut(s) | 93, 109, 204 |
| CviJI | RGCY | 8 cut(s) | 10, 65, 76, 117, 156, 255, 301, 313 |
| CviKI_1 | RGCY | 8 cut(s) | 10, 65, 76, 117, 156, 255, 301, 313 |
| DdeI | CTNAG | 1 cut(s) | 104 |
| DpnI | GATC | 1 cut(s) | 24 |
| DpnII | GATC | 1 cut(s) | 22 |
| Eco47I | GGWCC | 1 cut(s) | 150 |
| EcoRII | CCWGG | 1 cut(s) | 10 |
| FaeI | CATG | 3 cut(s) | 96, 112, 207 |
| FaiI | YATR | 8 cut(s) | 27, 94, 110, 159, 177, 205, 239, 241 |
| FaqI | GGGAC | 1 cut(s) | 269 |
| FatI | CATG | 3 cut(s) | 92, 108, 203 |
| FbaI | TGATCA | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 2 cut(s) | 118, 302 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 2 cut(s) | 118, 302 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 2 cut(s) | 118, 302 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| HaeIII | GGCC | 2 cut(s) | 10, 65 |
| HapII | CCGG | 1 cut(s) | 37 |
| Hin1II | CATG | 3 cut(s) | 96, 112, 207 |
| HincII | GTYRAC | 1 cut(s) | 192 |
| HindII | GTYRAC | 1 cut(s) | 192 |
| HinfI | GANTC | 1 cut(s) | 33 |
| HpaII | CCGG | 1 cut(s) | 37 |
| HphI | GGTGA | 1 cut(s) | 177 |
| Hpy166II | GTNNAC | 2 cut(s) | 185, 192 |
| Hpy188III | TCNNGA | 1 cut(s) | 87 |
| Hpy8I | GTNNAC | 2 cut(s) | 185, 192 |
| HpyCH4III | ACNGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 4 cut(s) | 112, 120, 203, 281 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 114, 261, 310 |
| HpyF3I | CTNAG | 1 cut(s) | 104 |
| Hsp92II | CATG | 3 cut(s) | 96, 112, 207 |
| Ksp22I | TGATCA | 1 cut(s) | 22 |
| Kzo9I | GATC | 1 cut(s) | 22 |
| LmnI | GCTCC | 2 cut(s) | 89, 137 |
| LpnPI | CCDG | 9 cut(s) | 24, 50, 72, 147, 166, 213, 218, 250, 300 |
| Lsp1109I | GCAGC | 2 cut(s) | 104, 288 |
| LweI | GCATC | 1 cut(s) | 161 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MalI | GATC | 1 cut(s) | 24 |
| MboI | GATC | 1 cut(s) | 22 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 1 cut(s) | 290 |
| MlyI | GAGTC | 1 cut(s) | 42 |
| MnlI | CCTC | 2 cut(s) | 48, 173 |
| MspA1I | CMGCKG | 1 cut(s) | 313 |
| MspI | CCGG | 1 cut(s) | 37 |
| MspR9I | CCNGG | 2 cut(s) | 12, 38 |
| MvaI | CCWGG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 114, 261, 310 |
| NciI | CCSGG | 1 cut(s) | 38 |
| NdeII | GATC | 1 cut(s) | 22 |
| NlaIII | CATG | 3 cut(s) | 96, 112, 207 |
| NspI | RCATGY | 2 cut(s) | 96, 112 |
| PaeI | GCATGC | 2 cut(s) | 96, 112 |
| PfoI | TCCNGGA | 1 cut(s) | 36 |
| PkrI | GCNGC | 2 cut(s) | 119, 303 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| Psp6I | CCWGG | 1 cut(s) | 10 |
| PspGI | CCWGG | 1 cut(s) | 10 |
| PspPI | GGNCC | 1 cut(s) | 150 |
| PvuII | CAGCTG | 1 cut(s) | 313 |
| SatI | GCNGC | 2 cut(s) | 118, 302 |
| Sau3AI | GATC | 1 cut(s) | 22 |
| Sau96I | GGNCC | 1 cut(s) | 150 |
| SchI | GAGTC | 1 cut(s) | 42 |
| ScrFI | CCNGG | 2 cut(s) | 12, 38 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SetI | ASST | 7 cut(s) | 8, 59, 119, 158, 184, 303, 315 |
| SfaNI | GCATC | 1 cut(s) | 161 |
| SinI | GGWCC | 1 cut(s) | 150 |
| SphI | GCATGC | 2 cut(s) | 96, 112 |
| Sse9I | AATT | 1 cut(s) | 290 |
| SspMI | CTAG | 1 cut(s) | 123 |
| StyD4I | CCNGG | 2 cut(s) | 10, 36 |
| TaaI | ACNGT | 1 cut(s) | 189 |
| TasI | AATT | 1 cut(s) | 290 |
| TseI | GCWGC | 2 cut(s) | 117, 301 |
| TspDTI | ATGAA | 1 cut(s) | 187 |
| VpaK11BI | GGWCC | 1 cut(s) | 150 |
| XapI | RAATTY | 1 cut(s) | 290 |
| XceI | RCATGY | 2 cut(s) | 96, 112 |
| XspI | CTAG | 1 cut(s) | 123 |