ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 348 |
| AciI | CCGC | 1 cut(s) | 14 |
| AcsI | RAATTY | 2 cut(s) | 263, 404 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 380 |
| AgsI | TTSAA | 2 cut(s) | 31, 358 |
| AjnI | CCWGG | 1 cut(s) | 420 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 433 |
| AluBI | AGCT | 5 cut(s) | 49, 92, 130, 232, 362 |
| AluI | AGCT | 5 cut(s) | 49, 92, 130, 232, 362 |
| AoxI | GGCC | 1 cut(s) | 33 |
| ApoI | RAATTY | 2 cut(s) | 263, 404 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 122 |
| AspLEI | GCGC | 1 cut(s) | 318 |
| AsuHPI | GGTGA | 1 cut(s) | 197 |
| BaeGI | GKGCMC | 1 cut(s) | 241 |
| BceAI | ACGGC | 1 cut(s) | 71 |
| BciT130I | CCWGG | 1 cut(s) | 422 |
| BclI | TGATCA | 1 cut(s) | 78 |
| BfaI | CTAG | 1 cut(s) | 348 |
| BfuAI | ACCTGC | 1 cut(s) | 348 |
| Bme1390I | CCNGG | 1 cut(s) | 422 |
| BmrFI | CCNGG | 1 cut(s) | 422 |
| BmrI | ACTGGG | 1 cut(s) | 72 |
| BmuI | ACTGGG | 1 cut(s) | 72 |
| BpmI | CTGGAG | 1 cut(s) | 443 |
| BpuEI | CTTGAG | 1 cut(s) | 78 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 380 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| BseBI | CCWGG | 1 cut(s) | 422 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BseMII | CTCAG | 1 cut(s) | 393 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| BseRI | GAGGAG | 2 cut(s) | 287, 440 |
| BseSI | GKGCMC | 1 cut(s) | 241 |
| BshFI | GGCC | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 239 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BsmFI | GGGAC | 1 cut(s) | 239 |
| BsnI | GGCC | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 1 cut(s) | 241 |
| Bsp143I | GATC | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 14 |
| BspANI | GGCC | 1 cut(s) | 35 |
| BspCNI | CTCAG | 1 cut(s) | 392 |
| BspHI | TCATGA | 1 cut(s) | 114 |
| BspMI | ACCTGC | 1 cut(s) | 348 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 78 |
| Bst2UI | CCWGG | 1 cut(s) | 422 |
| Bst6I | CTCTTC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 2 cut(s) | 53, 379 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstHHI | GCGC | 1 cut(s) | 318 |
| BstKTI | GATC | 1 cut(s) | 81 |
| BstMBI | GATC | 1 cut(s) | 78 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 32, 104, 313, 322 |
| BstNI | CCWGG | 1 cut(s) | 422 |
| BstSCI | CCNGG | 1 cut(s) | 420 |
| BstSLI | GKGCMC | 1 cut(s) | 241 |
| BsuRI | GGCC | 1 cut(s) | 35 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| BveI | ACCTGC | 1 cut(s) | 348 |
| CciI | TCATGA | 1 cut(s) | 114 |
| CfoI | GCGC | 1 cut(s) | 318 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 161, 196 |
| CviAII | CATG | 4 cut(s) | 115, 222, 248, 278 |
| DdeI | CTNAG | 2 cut(s) | 53, 379 |
| DpnI | GATC | 1 cut(s) | 80 |
| DpnII | GATC | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 1 cut(s) | 194 |
| EarI | CTCTTC | 1 cut(s) | 194 |
| Eco147I | AGGCCT | 1 cut(s) | 35 |
| EcoRII | CCWGG | 1 cut(s) | 420 |
| EcoT22I | ATGCAT | 3 cut(s) | 159, 213, 279 |
| FaeI | CATG | 4 cut(s) | 118, 225, 251, 281 |
| FaqI | GGGAC | 1 cut(s) | 239 |
| FatI | CATG | 4 cut(s) | 114, 221, 247, 277 |
| FauNDI | CATATG | 1 cut(s) | 109 |
| FbaI | TGATCA | 1 cut(s) | 78 |
| FokI | GGATG | 1 cut(s) | 206 |
| FspBI | CTAG | 1 cut(s) | 348 |
| GlaI | GCGC | 1 cut(s) | 317 |
| GsuI | CTGGAG | 1 cut(s) | 443 |
| HaeIII | GGCC | 1 cut(s) | 35 |
| HhaI | GCGC | 1 cut(s) | 318 |
| Hin1II | CATG | 4 cut(s) | 118, 225, 251, 281 |
| Hin6I | GCGC | 1 cut(s) | 316 |
| HinP1I | GCGC | 1 cut(s) | 316 |
| HindIII | AAGCTT | 1 cut(s) | 230 |
| HphI | GGTGA | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 1 cut(s) | 334 |
| Hpy188III | TCNNGA | 3 cut(s) | 115, 269, 453 |
| HpyAV | CCTTC | 2 cut(s) | 61, 436 |
| HpyCH4V | TGCA | 7 cut(s) | 19, 59, 107, 157, 211, 277, 325 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 32, 104, 313, 322 |
| HpyF3I | CTNAG | 2 cut(s) | 53, 379 |
| Hsp92II | CATG | 4 cut(s) | 118, 225, 251, 281 |
| HspAI | GCGC | 1 cut(s) | 316 |
| Ksp22I | TGATCA | 1 cut(s) | 78 |
| Kzo9I | GATC | 1 cut(s) | 78 |
| LmnI | GCTCC | 2 cut(s) | 23, 427 |
| LpnPI | CCDG | 8 cut(s) | 48, 117, 293, 353, 366, 407, 424, 434 |
| MaeI | CTAG | 1 cut(s) | 348 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 1 cut(s) | 80 |
| MboI | GATC | 1 cut(s) | 78 |
| MboII | GAAGA | 1 cut(s) | 211 |
| MhlI | GDGCHC | 1 cut(s) | 241 |
| MluCI | AATT | 5 cut(s) | 72, 118, 173, 263, 404 |
| MnlI | CCTC | 5 cut(s) | 142, 248, 308, 385, 418 |
| Mph1103I | ATGCAT | 3 cut(s) | 159, 213, 279 |
| MroXI | GAANNNNTTC | 1 cut(s) | 122 |
| MseI | TTAA | 1 cut(s) | 290 |
| MspR9I | CCNGG | 1 cut(s) | 422 |
| MvaI | CCWGG | 1 cut(s) | 422 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 32, 104, 313, 322 |
| NdeI | CATATG | 1 cut(s) | 109 |
| NdeII | GATC | 1 cut(s) | 78 |
| NlaIII | CATG | 4 cut(s) | 118, 225, 251, 281 |
| NmuCI | GTSAC | 1 cut(s) | 185 |
| NsiI | ATGCAT | 3 cut(s) | 159, 213, 279 |
| PagI | TCATGA | 1 cut(s) | 114 |
| PceI | AGGCCT | 1 cut(s) | 35 |
| PdmI | GAANNNNTTC | 1 cut(s) | 122 |
| Psp6I | CCWGG | 1 cut(s) | 420 |
| PspGI | CCWGG | 1 cut(s) | 420 |
| SaqAI | TTAA | 1 cut(s) | 290 |
| Sau3AI | GATC | 1 cut(s) | 78 |
| ScrFI | CCNGG | 1 cut(s) | 422 |
| SduI | GDGCHC | 1 cut(s) | 241 |
| SetI | ASST | 7 cut(s) | 51, 94, 132, 234, 342, 364, 423 |
| SmlI | CTYRAG | 1 cut(s) | 93 |
| SmoI | CTYRAG | 1 cut(s) | 93 |
| Sse9I | AATT | 5 cut(s) | 72, 118, 173, 263, 404 |
| SseBI | AGGCCT | 1 cut(s) | 35 |
| SsiI | CCGC | 1 cut(s) | 14 |
| SspMI | CTAG | 1 cut(s) | 348 |
| StuI | AGGCCT | 1 cut(s) | 35 |
| StyD4I | CCNGG | 1 cut(s) | 420 |
| TaqI | TCGA | 1 cut(s) | 126 |
| TasI | AATT | 5 cut(s) | 72, 118, 173, 263, 404 |
| Tru1I | TTAA | 1 cut(s) | 290 |
| Tru9I | TTAA | 1 cut(s) | 290 |
| TseFI | GTSAC | 1 cut(s) | 185 |
| Tsp45I | GTSAC | 1 cut(s) | 185 |
| TspDTI | ATGAA | 4 cut(s) | 59, 131, 264, 405 |
| TspGWI | ACGGA | 1 cut(s) | 206 |
| XapI | RAATTY | 2 cut(s) | 263, 404 |
| XmnI | GAANNNNTTC | 1 cut(s) | 122 |
| XspI | CTAG | 1 cut(s) | 348 |
| Zsp2I | ATGCAT | 3 cut(s) | 159, 213, 279 |