ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 282, 506 |
| AcoI | YGGCCR | 1 cut(s) | 279 |
| AfaI | GTAC | 2 cut(s) | 66, 400 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 74 |
| AgsI | TTSAA | 5 cut(s) | 142, 172, 184, 341, 354 |
| Alw21I | GWGCWC | 1 cut(s) | 94 |
| AoxI | GGCC | 1 cut(s) | 279 |
| AseI | ATTAAT | 1 cut(s) | 216 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 179 |
| AspS9I | GGNCC | 1 cut(s) | 388 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 388 |
| Bbv12I | GWGCWC | 1 cut(s) | 94 |
| BccI | CCATC | 1 cut(s) | 76 |
| BfaI | CTAG | 3 cut(s) | 72, 164, 520 |
| BfmI | CTRYAG | 1 cut(s) | 432 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlpI | GCTNAGC | 1 cut(s) | 264 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| Bme18I | GGWCC | 1 cut(s) | 388 |
| BmgT120I | GGNCC | 1 cut(s) | 388 |
| BmiI | GGNNCC | 1 cut(s) | 389 |
| BpmI | CTGGAG | 1 cut(s) | 430 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 264 |
| BsaAI | YACGTR | 1 cut(s) | 484 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 74 |
| Bse3DI | GCAATG | 1 cut(s) | 215 |
| BseGI | GGATG | 1 cut(s) | 298 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BseMI | GCAATG | 1 cut(s) | 215 |
| BseMII | CTCAG | 2 cut(s) | 351, 479 |
| BseRI | GAGGAG | 2 cut(s) | 84, 209 |
| BshFI | GGCC | 1 cut(s) | 281 |
| BsiHKAI | GWGCWC | 1 cut(s) | 94 |
| BslFI | GGGAC | 1 cut(s) | 58 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BsmFI | GGGAC | 1 cut(s) | 58 |
| BsnI | GGCC | 1 cut(s) | 281 |
| Bsp1286I | GDGCHC | 1 cut(s) | 94 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 264 |
| BspACI | CCGC | 2 cut(s) | 282, 506 |
| BspANI | GGCC | 1 cut(s) | 281 |
| BspCNI | CTCAG | 2 cut(s) | 352, 478 |
| BspLI | GGNNCC | 1 cut(s) | 389 |
| BsrDI | GCAATG | 1 cut(s) | 215 |
| Bst4CI | ACNGT | 1 cut(s) | 19 |
| Bst6I | CTCTTC | 3 cut(s) | 116, 150, 221 |
| BstBAI | YACGTR | 1 cut(s) | 484 |
| BstDEI | CTNAG | 4 cut(s) | 50, 264, 360, 465 |
| BstF5I | GGATG | 1 cut(s) | 298 |
| BstSFI | CTRYAG | 1 cut(s) | 432 |
| BstSNI | TACGTA | 1 cut(s) | 484 |
| BsuRI | GGCC | 1 cut(s) | 281 |
| BtsCI | GGATG | 1 cut(s) | 298 |
| Cfr13I | GGNCC | 1 cut(s) | 388 |
| Csp6I | GTAC | 2 cut(s) | 65, 399 |
| CviAII | CATG | 1 cut(s) | 314 |
| CviJI | RGCY | 7 cut(s) | 239, 263, 281, 365, 408, 458, 470 |
| CviKI_1 | RGCY | 7 cut(s) | 239, 263, 281, 365, 408, 458, 470 |
| CviQI | GTAC | 2 cut(s) | 65, 399 |
| DdeI | CTNAG | 4 cut(s) | 50, 264, 360, 465 |
| EaeI | YGGCCR | 1 cut(s) | 279 |
| Eam1104I | CTCTTC | 3 cut(s) | 116, 150, 221 |
| EarI | CTCTTC | 3 cut(s) | 116, 150, 221 |
| Eco105I | TACGTA | 1 cut(s) | 484 |
| Eco47I | GGWCC | 1 cut(s) | 388 |
| FaeI | CATG | 1 cut(s) | 317 |
| FaiI | YATR | 3 cut(s) | 192, 315, 449 |
| FaqI | GGGAC | 1 cut(s) | 58 |
| FatI | CATG | 1 cut(s) | 313 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| FokI | GGATG | 1 cut(s) | 305 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| FspBI | CTAG | 3 cut(s) | 72, 164, 520 |
| GluI | GCNGC | 1 cut(s) | 282 |
| GsuI | CTGGAG | 1 cut(s) | 430 |
| HaeIII | GGCC | 1 cut(s) | 281 |
| Hin1II | CATG | 1 cut(s) | 317 |
| HinfI | GANTC | 2 cut(s) | 46, 125 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 2 cut(s) | 225, 361 |
| Hpy188III | TCNNGA | 2 cut(s) | 72, 326 |
| HpyAV | CCTTC | 1 cut(s) | 433 |
| HpyCH4III | ACNGT | 1 cut(s) | 19 |
| HpyCH4IV | ACGT | 2 cut(s) | 252, 483 |
| HpyF3I | CTNAG | 4 cut(s) | 50, 264, 360, 465 |
| HpySE526I | ACGT | 2 cut(s) | 252, 483 |
| Hsp92II | CATG | 1 cut(s) | 317 |
| LmnI | GCTCC | 1 cut(s) | 97 |
| LpnPI | CCDG | 6 cut(s) | 71, 189, 263, 394, 420, 452 |
| MaeI | CTAG | 3 cut(s) | 72, 164, 520 |
| MaeII | ACGT | 2 cut(s) | 252, 483 |
| MaeIII | GTNAC | 2 cut(s) | 460, 501 |
| MboII | GAAGA | 8 cut(s) | 69, 103, 106, 130, 167, 184, 238, 430 |
| MhlI | GDGCHC | 1 cut(s) | 94 |
| MluCI | AATT | 4 cut(s) | 60, 217, 342, 444 |
| MlyI | GAGTC | 2 cut(s) | 40, 119 |
| MnlI | CCTC | 9 cut(s) | 47, 68, 105, 119, 187, 190, 341, 355, 398 |
| MroXI | GAANNNNTTC | 1 cut(s) | 179 |
| MseI | TTAA | 4 cut(s) | 80, 216, 377, 453 |
| NlaIII | CATG | 1 cut(s) | 317 |
| NlaIV | GGNNCC | 1 cut(s) | 389 |
| PdmI | GAANNNNTTC | 1 cut(s) | 179 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| PleI | GAGTC | 2 cut(s) | 40, 119 |
| PpsI | GAGTC | 2 cut(s) | 40, 119 |
| Ppu21I | YACGTR | 1 cut(s) | 484 |
| PshBI | ATTAAT | 1 cut(s) | 216 |
| PspN4I | GGNNCC | 1 cut(s) | 389 |
| PspPI | GGNCC | 1 cut(s) | 388 |
| RsaI | GTAC | 2 cut(s) | 66, 400 |
| RsaNI | GTAC | 2 cut(s) | 65, 399 |
| SaqAI | TTAA | 4 cut(s) | 80, 216, 377, 453 |
| SatI | GCNGC | 1 cut(s) | 282 |
| Sau96I | GGNCC | 1 cut(s) | 388 |
| SchI | GAGTC | 2 cut(s) | 40, 119 |
| SduI | GDGCHC | 1 cut(s) | 94 |
| SetI | ASST | 5 cut(s) | 111, 201, 255, 333, 486 |
| SfcI | CTRYAG | 1 cut(s) | 432 |
| SinI | GGWCC | 1 cut(s) | 388 |
| SnaBI | TACGTA | 1 cut(s) | 484 |
| Sse9I | AATT | 4 cut(s) | 60, 217, 342, 444 |
| SsiI | CCGC | 2 cut(s) | 282, 506 |
| SspI | AATATT | 1 cut(s) | 178 |
| SspMI | CTAG | 3 cut(s) | 72, 164, 520 |
| TaaI | ACNGT | 1 cut(s) | 19 |
| TaiI | ACGT | 2 cut(s) | 255, 486 |
| TasI | AATT | 4 cut(s) | 60, 217, 342, 444 |
| TauI | GCSGC | 1 cut(s) | 284 |
| Tru1I | TTAA | 4 cut(s) | 80, 216, 377, 453 |
| Tru9I | TTAA | 4 cut(s) | 80, 216, 377, 453 |
| TspDTI | ATGAA | 1 cut(s) | 106 |
| TspGWI | ACGGA | 1 cut(s) | 380 |
| VpaK11BI | GGWCC | 1 cut(s) | 388 |
| VspI | ATTAAT | 1 cut(s) | 216 |
| XbaI | TCTAGA | 1 cut(s) | 71 |
| XmnI | GAANNNNTTC | 1 cut(s) | 179 |
| XspI | CTAG | 3 cut(s) | 72, 164, 520 |