ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 206, 464 |
| AclWI | GGATC | 1 cut(s) | 496 |
| AcoI | YGGCCR | 2 cut(s) | 127, 493 |
| AcuI | CTGAAG | 1 cut(s) | 557 |
| AfaI | GTAC | 1 cut(s) | 387 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 262 |
| AgsI | TTSAA | 2 cut(s) | 422, 575 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 490, 522 |
| AluBI | AGCT | 4 cut(s) | 153, 270, 414, 515 |
| AluI | AGCT | 4 cut(s) | 153, 270, 414, 515 |
| Alw26I | GTCTC | 3 cut(s) | 89, 257, 599 |
| AlwI | GGATC | 1 cut(s) | 496 |
| AoxI | GGCC | 2 cut(s) | 127, 493 |
| ApeKI | GCWGC | 1 cut(s) | 414 |
| AsuHPI | GGTGA | 3 cut(s) | 20, 379, 491 |
| BalI | TGGCCA | 1 cut(s) | 129 |
| BanII | GRGCYC | 1 cut(s) | 16 |
| BbvI | GCAGC | 1 cut(s) | 401 |
| BccI | CCATC | 1 cut(s) | 175 |
| BclI | TGATCA | 1 cut(s) | 372 |
| BcoDI | GTCTC | 3 cut(s) | 89, 257, 599 |
| BfaI | CTAG | 1 cut(s) | 312 |
| BglII | AGATCT | 1 cut(s) | 327 |
| BisI | GCNGC | 1 cut(s) | 415 |
| BlsI | GCNGC | 1 cut(s) | 416 |
| BmiI | GGNNCC | 1 cut(s) | 15 |
| BmsI | GCATC | 4 cut(s) | 34, 131, 438, 442 |
| BsaI | GGTCTC | 1 cut(s) | 257 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 458, 488 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 262 |
| BseGI | GGATG | 1 cut(s) | 453 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 262 |
| BseMII | CTCAG | 3 cut(s) | 100, 273, 338 |
| BseRI | GAGGAG | 2 cut(s) | 92, 209 |
| BseXI | GCAGC | 1 cut(s) | 401 |
| BshFI | GGCC | 2 cut(s) | 129, 495 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 262 |
| BsmAI | GTCTC | 3 cut(s) | 89, 257, 599 |
| BsnI | GGCC | 2 cut(s) | 129, 495 |
| Bso31I | GGTCTC | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 1 cut(s) | 16 |
| Bsp143I | GATC | 3 cut(s) | 327, 372, 501 |
| BspACI | CCGC | 2 cut(s) | 206, 464 |
| BspANI | GGCC | 2 cut(s) | 129, 495 |
| BspCNI | CTCAG | 3 cut(s) | 99, 274, 339 |
| BspLI | GGNNCC | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 496 |
| BspTNI | GGTCTC | 1 cut(s) | 257 |
| BssMI | GATC | 3 cut(s) | 327, 372, 501 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 4 cut(s) | 86, 221, 282, 347 |
| BstF5I | GGATG | 1 cut(s) | 453 |
| BstKTI | GATC | 3 cut(s) | 330, 375, 504 |
| BstMAI | GTCTC | 3 cut(s) | 89, 257, 599 |
| BstMBI | GATC | 3 cut(s) | 327, 372, 501 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstV1I | GCAGC | 1 cut(s) | 401 |
| BstX2I | RGATCY | 2 cut(s) | 327, 501 |
| BstYI | RGATCY | 2 cut(s) | 327, 501 |
| BsuRI | GGCC | 2 cut(s) | 129, 495 |
| BtsCI | GGATG | 1 cut(s) | 453 |
| Csp6I | GTAC | 1 cut(s) | 386 |
| CviAII | CATG | 2 cut(s) | 191, 236 |
| CviJI | RGCY | 9 cut(s) | 14, 68, 129, 153, 270, 414, 495, 515, 570 |
| CviKI_1 | RGCY | 9 cut(s) | 14, 68, 129, 153, 270, 414, 495, 515, 570 |
| CviQI | GTAC | 1 cut(s) | 386 |
| DdeI | CTNAG | 4 cut(s) | 86, 221, 282, 347 |
| DpnI | GATC | 3 cut(s) | 329, 374, 503 |
| DpnII | GATC | 3 cut(s) | 327, 372, 501 |
| EaeI | YGGCCR | 2 cut(s) | 127, 493 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| EciI | GGCGGA | 1 cut(s) | 479 |
| Eco24I | GRGCYC | 1 cut(s) | 16 |
| Eco31I | GGTCTC | 1 cut(s) | 257 |
| Eco57I | CTGAAG | 1 cut(s) | 557 |
| EcoT38I | GRGCYC | 1 cut(s) | 16 |
| FaeI | CATG | 2 cut(s) | 194, 239 |
| FatI | CATG | 2 cut(s) | 190, 235 |
| FauNDI | CATATG | 1 cut(s) | 403 |
| FbaI | TGATCA | 1 cut(s) | 372 |
| Fnu4HI | GCNGC | 1 cut(s) | 415 |
| FokI | GGATG | 1 cut(s) | 460 |
| FriOI | GRGCYC | 1 cut(s) | 16 |
| Fsp4HI | GCNGC | 1 cut(s) | 415 |
| FspBI | CTAG | 1 cut(s) | 312 |
| GluI | GCNGC | 1 cut(s) | 415 |
| HaeIII | GGCC | 2 cut(s) | 129, 495 |
| Hin1II | CATG | 2 cut(s) | 194, 239 |
| HinfI | GANTC | 2 cut(s) | 100, 315 |
| HphI | GGTGA | 3 cut(s) | 20, 379, 491 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy188I | TCNGA | 3 cut(s) | 89, 147, 559 |
| Hpy188III | TCNNGA | 1 cut(s) | 331 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| HpyAV | CCTTC | 4 cut(s) | 58, 61, 532, 581 |
| HpyCH4V | TGCA | 4 cut(s) | 106, 190, 451, 531 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 4 cut(s) | 86, 221, 282, 347 |
| Hsp92II | CATG | 2 cut(s) | 194, 239 |
| Ksp22I | TGATCA | 1 cut(s) | 372 |
| Kzo9I | GATC | 3 cut(s) | 327, 372, 501 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 6 cut(s) | 111, 316, 342, 359, 428, 439 |
| Lsp1109I | GCAGC | 1 cut(s) | 401 |
| LweI | GCATC | 4 cut(s) | 34, 131, 438, 442 |
| MaeI | CTAG | 1 cut(s) | 312 |
| MaeIII | GTNAC | 2 cut(s) | 26, 479 |
| MalI | GATC | 3 cut(s) | 329, 374, 503 |
| MboI | GATC | 3 cut(s) | 327, 372, 501 |
| MboII | GAAGA | 4 cut(s) | 25, 28, 128, 337 |
| MflI | RGATCY | 2 cut(s) | 327, 501 |
| MhlI | GDGCHC | 1 cut(s) | 16 |
| MlsI | TGGCCA | 1 cut(s) | 129 |
| MluCI | AATT | 1 cut(s) | 610 |
| MluNI | TGGCCA | 1 cut(s) | 129 |
| MnlI | CCTC | 7 cut(s) | 41, 70, 187, 256, 277, 358, 535 |
| Mox20I | TGGCCA | 1 cut(s) | 129 |
| MscI | TGGCCA | 1 cut(s) | 129 |
| MseI | TTAA | 1 cut(s) | 92 |
| MslI | CAYNNNNRTG | 1 cut(s) | 59 |
| Msp20I | TGGCCA | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NdeI | CATATG | 1 cut(s) | 403 |
| NdeII | GATC | 3 cut(s) | 327, 372, 501 |
| NlaIII | CATG | 2 cut(s) | 194, 239 |
| NlaIV | GGNNCC | 1 cut(s) | 15 |
| NmuCI | GTSAC | 2 cut(s) | 26, 479 |
| PfeI | GAWTC | 2 cut(s) | 100, 315 |
| PkrI | GCNGC | 1 cut(s) | 416 |
| PspN4I | GGNNCC | 1 cut(s) | 15 |
| PsuI | RGATCY | 2 cut(s) | 327, 501 |
| RsaI | GTAC | 1 cut(s) | 387 |
| RsaNI | GTAC | 1 cut(s) | 386 |
| RseI | CAYNNNNRTG | 1 cut(s) | 59 |
| SaqAI | TTAA | 1 cut(s) | 92 |
| SatI | GCNGC | 1 cut(s) | 415 |
| Sau3AI | GATC | 3 cut(s) | 327, 372, 501 |
| SduI | GDGCHC | 1 cut(s) | 16 |
| SetI | ASST | 8 cut(s) | 33, 155, 267, 272, 369, 416, 458, 517 |
| SfaNI | GCATC | 4 cut(s) | 34, 131, 438, 442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 59 |
| Sse9I | AATT | 1 cut(s) | 610 |
| SsiI | CCGC | 2 cut(s) | 206, 464 |
| SspMI | CTAG | 1 cut(s) | 312 |
| TasI | AATT | 1 cut(s) | 610 |
| TfiI | GAWTC | 2 cut(s) | 100, 315 |
| Tru1I | TTAA | 1 cut(s) | 92 |
| Tru9I | TTAA | 1 cut(s) | 92 |
| TseFI | GTSAC | 2 cut(s) | 26, 479 |
| TseI | GCWGC | 1 cut(s) | 414 |
| Tsp45I | GTSAC | 2 cut(s) | 26, 479 |
| TspDTI | ATGAA | 4 cut(s) | 43, 77, 129, 286 |
| XspI | CTAG | 1 cut(s) | 312 |