ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 89 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 92 |
| AccI | GTMKAC | 1 cut(s) | 97 |
| AclWI | GGATC | 1 cut(s) | 266 |
| AdeI | CACNNNGTG | 2 cut(s) | 75, 92 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AflIII | ACRYGT | 1 cut(s) | 11 |
| AgsI | TTSAA | 1 cut(s) | 259 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 15, 47 |
| AluBI | AGCT | 3 cut(s) | 123, 188, 244 |
| AluI | AGCT | 3 cut(s) | 123, 188, 244 |
| Alw26I | GTCTC | 1 cut(s) | 294 |
| AlwI | GGATC | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 62 |
| ApeKI | GCWGC | 1 cut(s) | 188 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 245 |
| AspS9I | GGNCC | 1 cut(s) | 78 |
| AsuC2I | CCSGG | 1 cut(s) | 19 |
| AsuII | TTCGAA | 1 cut(s) | 126 |
| AvaII | GGWCC | 1 cut(s) | 78 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BccI | CCATC | 2 cut(s) | 110, 283 |
| BcnI | CCSGG | 1 cut(s) | 19 |
| BcoDI | GTCTC | 1 cut(s) | 294 |
| BfaI | CTAG | 2 cut(s) | 90, 198 |
| BfuAI | ACCTGC | 1 cut(s) | 89 |
| BisI | GCNGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 190 |
| Bme1390I | CCNGG | 1 cut(s) | 19 |
| Bme18I | GGWCC | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 1 cut(s) | 78 |
| BmiI | GGNNCC | 1 cut(s) | 253 |
| BmrFI | CCNGG | 1 cut(s) | 19 |
| BmsI | GCATC | 1 cut(s) | 202 |
| Bpu10I | CCTNAGC | 1 cut(s) | 264 |
| Bpu14I | TTCGAA | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 19 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseRI | GAGGAG | 1 cut(s) | 282 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| Bsh1285I | CGRYCG | 1 cut(s) | 221 |
| BshFI | GGCC | 1 cut(s) | 64 |
| BsiEI | CGRYCG | 1 cut(s) | 221 |
| BsiSI | CCGG | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BsmAI | GTCTC | 1 cut(s) | 294 |
| BsnI | GGCC | 1 cut(s) | 64 |
| Bsp119I | TTCGAA | 1 cut(s) | 126 |
| Bsp143I | GATC | 2 cut(s) | 218, 271 |
| BspANI | GGCC | 1 cut(s) | 64 |
| BspLI | GGNNCC | 1 cut(s) | 253 |
| BspMI | ACCTGC | 1 cut(s) | 89 |
| BspPI | GGATC | 1 cut(s) | 266 |
| BspQI | GCTCTTC | 1 cut(s) | 251 |
| BspT104I | TTCGAA | 1 cut(s) | 126 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BssMI | GATC | 2 cut(s) | 218, 271 |
| Bst6I | CTCTTC | 1 cut(s) | 251 |
| BstBI | TTCGAA | 1 cut(s) | 126 |
| BstDEI | CTNAG | 1 cut(s) | 264 |
| BstKTI | GATC | 2 cut(s) | 221, 274 |
| BstMAI | GTCTC | 1 cut(s) | 294 |
| BstMBI | GATC | 2 cut(s) | 218, 271 |
| BstMCI | CGRYCG | 1 cut(s) | 221 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 194 |
| BstNSI | RCATGY | 1 cut(s) | 15 |
| BstSCI | CCNGG | 1 cut(s) | 17 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| BstX2I | RGATCY | 1 cut(s) | 271 |
| BstYI | RGATCY | 1 cut(s) | 271 |
| BsuRI | GGCC | 1 cut(s) | 64 |
| BveI | ACCTGC | 1 cut(s) | 89 |
| Cfr13I | GGNCC | 1 cut(s) | 78 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviAII | CATG | 2 cut(s) | 12, 26 |
| CviJI | RGCY | 7 cut(s) | 64, 123, 188, 197, 244, 252, 263 |
| CviKI_1 | RGCY | 7 cut(s) | 64, 123, 188, 197, 244, 252, 263 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 264 |
| DpnI | GATC | 2 cut(s) | 220, 273 |
| DpnII | GATC | 2 cut(s) | 218, 271 |
| DraIII | CACNNNGTG | 2 cut(s) | 75, 92 |
| Eam1104I | CTCTTC | 1 cut(s) | 251 |
| EarI | CTCTTC | 1 cut(s) | 251 |
| Eco47I | GGWCC | 1 cut(s) | 78 |
| FaeI | CATG | 2 cut(s) | 15, 29 |
| FaiI | YATR | 6 cut(s) | 13, 27, 113, 151, 230, 325 |
| FatI | CATG | 2 cut(s) | 11, 25 |
| FblI | GTMKAC | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 1 cut(s) | 189 |
| Fsp4HI | GCNGC | 1 cut(s) | 189 |
| FspBI | CTAG | 2 cut(s) | 90, 198 |
| GluI | GCNGC | 1 cut(s) | 189 |
| HaeIII | GGCC | 1 cut(s) | 64 |
| HapII | CCGG | 1 cut(s) | 18 |
| Hin1II | CATG | 2 cut(s) | 15, 29 |
| HpaII | CCGG | 1 cut(s) | 18 |
| Hpy166II | GTNNAC | 2 cut(s) | 78, 98 |
| Hpy188I | TCNGA | 1 cut(s) | 164 |
| Hpy188III | TCNNGA | 1 cut(s) | 283 |
| Hpy8I | GTNNAC | 2 cut(s) | 78, 98 |
| HpyAV | CCTTC | 1 cut(s) | 265 |
| HpyCH4V | TGCA | 2 cut(s) | 191, 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 194 |
| HpyF3I | CTNAG | 1 cut(s) | 264 |
| Hsp92II | CATG | 2 cut(s) | 15, 29 |
| Kzo9I | GATC | 2 cut(s) | 218, 271 |
| LguI | GCTCTTC | 1 cut(s) | 251 |
| LmnI | GCTCC | 2 cut(s) | 120, 257 |
| LpnPI | CCDG | 4 cut(s) | 31, 94, 296, 302 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| LweI | GCATC | 1 cut(s) | 202 |
| MaeI | CTAG | 2 cut(s) | 90, 198 |
| MalI | GATC | 2 cut(s) | 220, 273 |
| MboI | GATC | 2 cut(s) | 218, 271 |
| MboII | GAAGA | 2 cut(s) | 61, 238 |
| MflI | RGATCY | 1 cut(s) | 271 |
| MnlI | CCTC | 4 cut(s) | 54, 139, 228, 303 |
| MroXI | GAANNNNTTC | 1 cut(s) | 245 |
| MseI | TTAA | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 18 |
| MspR9I | CCNGG | 1 cut(s) | 19 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 194 |
| NciI | CCSGG | 1 cut(s) | 19 |
| NdeII | GATC | 2 cut(s) | 218, 271 |
| NlaIII | CATG | 2 cut(s) | 15, 29 |
| NlaIV | GGNNCC | 1 cut(s) | 253 |
| NspI | RCATGY | 1 cut(s) | 15 |
| NspV | TTCGAA | 1 cut(s) | 126 |
| PciI | ACATGT | 1 cut(s) | 11 |
| PciSI | GCTCTTC | 1 cut(s) | 251 |
| PdmI | GAANNNNTTC | 1 cut(s) | 245 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 92 |
| PkrI | GCNGC | 1 cut(s) | 190 |
| Ple19I | CGATCG | 1 cut(s) | 221 |
| PscI | ACATGT | 1 cut(s) | 11 |
| PspN4I | GGNNCC | 1 cut(s) | 253 |
| PspPI | GGNCC | 1 cut(s) | 78 |
| PsuI | RGATCY | 1 cut(s) | 271 |
| PvuI | CGATCG | 1 cut(s) | 221 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| SapI | GCTCTTC | 1 cut(s) | 251 |
| SaqAI | TTAA | 1 cut(s) | 108 |
| SatI | GCNGC | 1 cut(s) | 189 |
| Sau3AI | GATC | 2 cut(s) | 218, 271 |
| Sau96I | GGNCC | 1 cut(s) | 78 |
| ScrFI | CCNGG | 1 cut(s) | 19 |
| SetI | ASST | 8 cut(s) | 83, 91, 125, 143, 150, 190, 239, 246 |
| SfaNI | GCATC | 1 cut(s) | 202 |
| SfuI | TTCGAA | 1 cut(s) | 126 |
| SinI | GGWCC | 1 cut(s) | 78 |
| SspMI | CTAG | 2 cut(s) | 90, 198 |
| StyD4I | CCNGG | 1 cut(s) | 17 |
| TaqI | TCGA | 2 cut(s) | 126, 233 |
| TaqII | GACCGA | 1 cut(s) | 115 |
| Tru1I | TTAA | 1 cut(s) | 108 |
| Tru9I | TTAA | 1 cut(s) | 108 |
| TseI | GCWGC | 1 cut(s) | 188 |
| TspDTI | ATGAA | 3 cut(s) | 62, 146, 183 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 78 |
| XceI | RCATGY | 1 cut(s) | 15 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 72 |
| XmiI | GTMKAC | 1 cut(s) | 97 |
| XmnI | GAANNNNTTC | 1 cut(s) | 245 |
| XspI | CTAG | 2 cut(s) | 90, 198 |