Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 333 |
| AciI | CCGC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 333 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AluBI | AGCT | 5 cut(s) | 56, 134, 204, 300, 410 |
| AluI | AGCT | 5 cut(s) | 56, 134, 204, 300, 410 |
| Alw26I | GTCTC | 1 cut(s) | 370 |
| AoxI | GGCC | 2 cut(s) | 261, 351 |
| AseI | ATTAAT | 1 cut(s) | 321 |
| AspS9I | GGNCC | 2 cut(s) | 8, 351 |
| AsuHPI | GGTGA | 1 cut(s) | 106 |
| AvaII | GGWCC | 1 cut(s) | 8 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 462, 494 |
| BccI | CCATC | 2 cut(s) | 269, 467 |
| BciVI | GTATCC | 2 cut(s) | 182, 245 |
| BcoDI | GTCTC | 1 cut(s) | 370 |
| BfaI | CTAG | 2 cut(s) | 297, 426 |
| BfuI | GTATCC | 2 cut(s) | 182, 245 |
| BglII | AGATCT | 1 cut(s) | 281 |
| Bme18I | GGWCC | 1 cut(s) | 8 |
| BmgT120I | GGNCC | 2 cut(s) | 8, 351 |
| BmiI | GGNNCC | 4 cut(s) | 9, 10, 19, 352 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 12, 361 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 333 |
| Bse1I | ACTGG | 2 cut(s) | 153, 338 |
| BseDI | CCNNGG | 2 cut(s) | 12, 361 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 333 |
| BseMII | CTCAG | 1 cut(s) | 397 |
| BseNI | ACTGG | 2 cut(s) | 153, 338 |
| BseRI | GAGGAG | 1 cut(s) | 204 |
| BshFI | GGCC | 2 cut(s) | 263, 353 |
| BslFI | GGGAC | 1 cut(s) | 21 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 333 |
| BsmAI | GTCTC | 1 cut(s) | 370 |
| BsmFI | GGGAC | 1 cut(s) | 21 |
| BsnI | GGCC | 2 cut(s) | 263, 353 |
| Bsp143I | GATC | 2 cut(s) | 281, 286 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 2 cut(s) | 263, 353 |
| BspCNI | CTCAG | 1 cut(s) | 396 |
| BspLI | GGNNCC | 4 cut(s) | 9, 10, 19, 352 |
| BspQI | GCTCTTC | 1 cut(s) | 400 |
| BsrI | ACTGG | 2 cut(s) | 153, 338 |
| BssECI | CCNNGG | 2 cut(s) | 12, 361 |
| BssMI | GATC | 2 cut(s) | 281, 286 |
| Bst6I | CTCTTC | 1 cut(s) | 400 |
| BstC8I | GCNNGC | 1 cut(s) | 265 |
| BstDEI | CTNAG | 3 cut(s) | 179, 185, 383 |
| BstDSI | CCRYGG | 2 cut(s) | 12, 361 |
| BstKTI | GATC | 2 cut(s) | 284, 289 |
| BstMAI | GTCTC | 1 cut(s) | 370 |
| BstMBI | GATC | 2 cut(s) | 281, 286 |
| BstX2I | RGATCY | 1 cut(s) | 281 |
| BstYI | RGATCY | 1 cut(s) | 281 |
| BsuI | GTATCC | 2 cut(s) | 182, 245 |
| BsuRI | GGCC | 2 cut(s) | 263, 353 |
| BtgI | CCRYGG | 2 cut(s) | 12, 361 |
| BtsIMutI | CAGTG | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 265 |
| Cfr13I | GGNCC | 2 cut(s) | 8, 351 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 343, 378 |
| CviAII | CATG | 2 cut(s) | 257, 461 |
| DdeI | CTNAG | 3 cut(s) | 179, 185, 383 |
| DpnI | GATC | 2 cut(s) | 283, 288 |
| DpnII | GATC | 2 cut(s) | 281, 286 |
| Eam1104I | CTCTTC | 1 cut(s) | 400 |
| EarI | CTCTTC | 1 cut(s) | 400 |
| Eco47I | GGWCC | 1 cut(s) | 8 |
| EcoO109I | RGGNCCY | 1 cut(s) | 8 |
| EcoT22I | ATGCAT | 1 cut(s) | 466 |
| FaeI | CATG | 2 cut(s) | 260, 464 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 394, 426 |
| FaqI | GGGAC | 1 cut(s) | 21 |
| FatI | CATG | 2 cut(s) | 256, 460 |
| FspBI | CTAG | 2 cut(s) | 297, 426 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 2 cut(s) | 263, 353 |
| Hin1II | CATG | 2 cut(s) | 260, 464 |
| HindIII | AAGCTT | 1 cut(s) | 132 |
| HphI | GGTGA | 1 cut(s) | 106 |
| Hpy166II | GTNNAC | 1 cut(s) | 479 |
| Hpy188I | TCNGA | 3 cut(s) | 286, 386, 491 |
| Hpy188III | TCNNGA | 1 cut(s) | 434 |
| Hpy8I | GTNNAC | 1 cut(s) | 479 |
| HpyCH4V | TGCA | 2 cut(s) | 167, 464 |
| HpyF3I | CTNAG | 3 cut(s) | 179, 185, 383 |
| Hsp92II | CATG | 2 cut(s) | 260, 464 |
| KflI | GGGWCCC | 1 cut(s) | 8 |
| Kzo9I | GATC | 2 cut(s) | 281, 286 |
| LguI | GCTCTTC | 1 cut(s) | 400 |
| LmnI | GCTCC | 1 cut(s) | 191 |
| LpnPI | CCDG | 5 cut(s) | 66, 134, 277, 319, 497 |
| MaeI | CTAG | 2 cut(s) | 297, 426 |
| MaeIII | GTNAC | 2 cut(s) | 83, 502 |
| MalI | GATC | 2 cut(s) | 283, 288 |
| MboI | GATC | 2 cut(s) | 281, 286 |
| MboII | GAAGA | 5 cut(s) | 80, 109, 349, 417, 482 |
| MflI | RGATCY | 1 cut(s) | 281 |
| MluCI | AATT | 6 cut(s) | 31, 71, 162, 318, 342, 442 |
| MnlI | CCTC | 5 cut(s) | 58, 182, 186, 221, 380 |
| Mph1103I | ATGCAT | 1 cut(s) | 466 |
| MseI | TTAA | 3 cut(s) | 74, 89, 321 |
| NdeII | GATC | 2 cut(s) | 281, 286 |
| NlaIII | CATG | 2 cut(s) | 260, 464 |
| NlaIV | GGNNCC | 4 cut(s) | 9, 10, 19, 352 |
| NmuCI | GTSAC | 1 cut(s) | 83 |
| NsiI | ATGCAT | 1 cut(s) | 466 |
| PciSI | GCTCTTC | 1 cut(s) | 400 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 333 |
| PpuMI | RGGWCCY | 1 cut(s) | 8 |
| PshBI | ATTAAT | 1 cut(s) | 321 |
| Psp5II | RGGWCCY | 1 cut(s) | 8 |
| PspN4I | GGNNCC | 4 cut(s) | 9, 10, 19, 352 |
| PspPI | GGNCC | 2 cut(s) | 8, 351 |
| PspPPI | RGGWCCY | 1 cut(s) | 8 |
| PsuI | RGATCY | 1 cut(s) | 281 |
| SapI | GCTCTTC | 1 cut(s) | 400 |
| SaqAI | TTAA | 3 cut(s) | 74, 89, 321 |
| Sau3AI | GATC | 2 cut(s) | 281, 286 |
| Sau96I | GGNCC | 2 cut(s) | 8, 351 |
| SetI | ASST | 9 cut(s) | 29, 58, 136, 206, 302, 400, 412, 486, 512 |
| SinI | GGWCC | 1 cut(s) | 8 |
| Sse9I | AATT | 6 cut(s) | 31, 71, 162, 318, 342, 442 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 2 cut(s) | 297, 426 |
| TasI | AATT | 6 cut(s) | 31, 71, 162, 318, 342, 442 |
| Tru1I | TTAA | 3 cut(s) | 74, 89, 321 |
| Tru9I | TTAA | 3 cut(s) | 74, 89, 321 |
| TscAI | CASTG | 1 cut(s) | 153 |
| TseFI | GTSAC | 1 cut(s) | 83 |
| Tsp45I | GTSAC | 1 cut(s) | 83 |
| TspDTI | ATGAA | 1 cut(s) | 81 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 1 cut(s) | 153 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 333 |
| VpaK11BI | GGWCC | 1 cut(s) | 8 |
| VspI | ATTAAT | 1 cut(s) | 321 |
| XspI | CTAG | 2 cut(s) | 297, 426 |
| Zsp2I | ATGCAT | 1 cut(s) | 466 |