Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 410 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 283 |
| AciI | CCGC | 1 cut(s) | 287 |
| AclWI | GGATC | 2 cut(s) | 19, 32 |
| AfaI | GTAC | 1 cut(s) | 159 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 283 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 90, 122, 257, 289 |
| AluBI | AGCT | 2 cut(s) | 58, 273 |
| AluI | AGCT | 2 cut(s) | 58, 273 |
| AlwI | GGATC | 2 cut(s) | 19, 32 |
| AspS9I | GGNCC | 1 cut(s) | 289 |
| AsuHPI | GGTGA | 1 cut(s) | 108 |
| AvaII | GGWCC | 1 cut(s) | 289 |
| BaeGI | GKGCMC | 1 cut(s) | 243 |
| BamHI | GGATCC | 1 cut(s) | 24 |
| BbsI | GAAGAC | 1 cut(s) | 157 |
| BccI | CCATC | 2 cut(s) | 12, 185 |
| BfaI | CTAG | 2 cut(s) | 270, 396 |
| BlpI | GCTNAGC | 1 cut(s) | 54 |
| BmcAI | AGTACT | 1 cut(s) | 159 |
| Bme18I | GGWCC | 1 cut(s) | 289 |
| BmgT120I | GGNCC | 1 cut(s) | 289 |
| BmiI | GGNNCC | 1 cut(s) | 26 |
| BmrI | ACTGGG | 1 cut(s) | 237 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BmuI | ACTGGG | 1 cut(s) | 237 |
| BpiI | GAAGAC | 1 cut(s) | 157 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 54 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 283 |
| Bse1I | ACTGG | 2 cut(s) | 175, 243 |
| Bse3DI | GCAATG | 3 cut(s) | 82, 320, 354 |
| BseGI | GGATG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 283 |
| BseMI | GCAATG | 3 cut(s) | 82, 320, 354 |
| BseNI | ACTGG | 2 cut(s) | 175, 243 |
| BseSI | GKGCMC | 1 cut(s) | 243 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 283 |
| Bsp1286I | GDGCHC | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 24 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 54 |
| BspACI | CCGC | 1 cut(s) | 287 |
| BspLI | GGNNCC | 1 cut(s) | 26 |
| BspPI | GGATC | 2 cut(s) | 19, 32 |
| BsrDI | GCAATG | 3 cut(s) | 82, 320, 354 |
| BsrI | ACTGG | 2 cut(s) | 175, 243 |
| BssMI | GATC | 1 cut(s) | 24 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 54 |
| BstF5I | GGATG | 1 cut(s) | 23 |
| BstKTI | GATC | 1 cut(s) | 27 |
| BstMBI | GATC | 1 cut(s) | 24 |
| BstSLI | GKGCMC | 1 cut(s) | 243 |
| BstV2I | GAAGAC | 1 cut(s) | 157 |
| BstX2I | RGATCY | 1 cut(s) | 24 |
| BstYI | RGATCY | 1 cut(s) | 24 |
| BtsCI | GGATG | 1 cut(s) | 23 |
| BtsIMutI | CAGTG | 1 cut(s) | 182 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 1 cut(s) | 289 |
| Csp6I | GTAC | 1 cut(s) | 158 |
| CviJI | RGCY | 3 cut(s) | 58, 273, 393 |
| CviKI_1 | RGCY | 3 cut(s) | 58, 273, 393 |
| CviQI | GTAC | 1 cut(s) | 158 |
| DdeI | CTNAG | 1 cut(s) | 54 |
| DpnI | GATC | 1 cut(s) | 26 |
| DpnII | GATC | 1 cut(s) | 24 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 410 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 410 |
| EciI | GGCGGA | 1 cut(s) | 302 |
| Eco47I | GGWCC | 1 cut(s) | 289 |
| FaiI | YATR | 5 cut(s) | 61, 209, 211, 279, 336 |
| FokI | GGATG | 1 cut(s) | 30 |
| FspBI | CTAG | 2 cut(s) | 270, 396 |
| HinfI | GANTC | 4 cut(s) | 113, 171, 226, 367 |
| HphI | GGTGA | 1 cut(s) | 108 |
| Hpy166II | GTNNAC | 1 cut(s) | 248 |
| Hpy188I | TCNGA | 2 cut(s) | 325, 416 |
| Hpy188III | TCNNGA | 1 cut(s) | 401 |
| Hpy8I | GTNNAC | 1 cut(s) | 248 |
| HpyAV | CCTTC | 1 cut(s) | 129 |
| HpyCH4V | TGCA | 1 cut(s) | 359 |
| HpyF3I | CTNAG | 1 cut(s) | 54 |
| Kzo9I | GATC | 1 cut(s) | 24 |
| LpnPI | CCDG | 4 cut(s) | 153, 188, 256, 295 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeI | CTAG | 2 cut(s) | 270, 396 |
| MalI | GATC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 24 |
| MboII | GAAGA | 3 cut(s) | 162, 193, 376 |
| MflI | RGATCY | 1 cut(s) | 24 |
| MhlI | GDGCHC | 1 cut(s) | 243 |
| MluCI | AATT | 1 cut(s) | 294 |
| MnlI | CCTC | 4 cut(s) | 15, 38, 48, 357 |
| MseI | TTAA | 2 cut(s) | 252, 305 |
| NdeII | GATC | 1 cut(s) | 24 |
| NlaIV | GGNNCC | 1 cut(s) | 26 |
| PfeI | GAWTC | 4 cut(s) | 113, 171, 226, 367 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 1 cut(s) | 26 |
| PspPI | GGNCC | 1 cut(s) | 289 |
| PsuI | RGATCY | 1 cut(s) | 24 |
| RsaI | GTAC | 1 cut(s) | 159 |
| RsaNI | GTAC | 1 cut(s) | 158 |
| SaqAI | TTAA | 2 cut(s) | 252, 305 |
| Sau3AI | GATC | 1 cut(s) | 24 |
| Sau96I | GGNCC | 1 cut(s) | 289 |
| ScaI | AGTACT | 1 cut(s) | 159 |
| SduI | GDGCHC | 1 cut(s) | 243 |
| SetI | ASST | 5 cut(s) | 60, 121, 275, 294, 388 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| SinI | GGWCC | 1 cut(s) | 289 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| Sse9I | AATT | 1 cut(s) | 294 |
| SsiI | CCGC | 1 cut(s) | 287 |
| SspI | AATATT | 1 cut(s) | 74 |
| SspMI | CTAG | 2 cut(s) | 270, 396 |
| TasI | AATT | 1 cut(s) | 294 |
| TatI | WGTACW | 1 cut(s) | 157 |
| TfiI | GAWTC | 4 cut(s) | 113, 171, 226, 367 |
| Tru1I | TTAA | 2 cut(s) | 252, 305 |
| Tru9I | TTAA | 2 cut(s) | 252, 305 |
| TscAI | CASTG | 1 cut(s) | 182 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| TspRI | CASTG | 1 cut(s) | 182 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 289 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 182 |
| XspI | CTAG | 2 cut(s) | 270, 396 |
| ZrmI | AGTACT | 1 cut(s) | 159 |