Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 238 |
| AciI | CCGC | 2 cut(s) | 68, 301 |
| AcsI | RAATTY | 1 cut(s) | 146 |
| AfaI | GTAC | 1 cut(s) | 53 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 91 |
| AgsI | TTSAA | 2 cut(s) | 441, 455 |
| AluBI | AGCT | 4 cut(s) | 116, 176, 335, 350 |
| AluI | AGCT | 4 cut(s) | 116, 176, 335, 350 |
| AoxI | GGCC | 2 cut(s) | 65, 138 |
| ApeKI | GCWGC | 2 cut(s) | 332, 347 |
| ApoI | RAATTY | 1 cut(s) | 146 |
| AsuHPI | GGTGA | 1 cut(s) | 286 |
| AxyI | CCTNAGG | 1 cut(s) | 369 |
| BbvCI | CCTCAGC | 1 cut(s) | 117 |
| BbvI | GCAGC | 2 cut(s) | 344, 359 |
| BccI | CCATC | 1 cut(s) | 70 |
| BfaI | CTAG | 1 cut(s) | 357 |
| BfmI | CTRYAG | 1 cut(s) | 177 |
| BisI | GCNGC | 3 cut(s) | 68, 333, 348 |
| BlsI | GCNGC | 3 cut(s) | 69, 334, 349 |
| Bpu10I | CCTNAGC | 1 cut(s) | 117 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 91 |
| Bse21I | CCTNAGG | 1 cut(s) | 369 |
| Bse3DI | GCAATG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BseMI | GCAATG | 1 cut(s) | 31 |
| BseMII | CTCAG | 2 cut(s) | 108, 360 |
| BseXI | GCAGC | 2 cut(s) | 344, 359 |
| BseYI | CCCAGC | 1 cut(s) | 172 |
| BsgI | GTGCAG | 1 cut(s) | 351 |
| BshFI | GGCC | 2 cut(s) | 67, 140 |
| BslFI | GGGAC | 3 cut(s) | 199, 244, 264 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 91 |
| BsmFI | GGGAC | 3 cut(s) | 199, 244, 264 |
| BsnI | GGCC | 2 cut(s) | 67, 140 |
| BspACI | CCGC | 2 cut(s) | 68, 301 |
| BspANI | GGCC | 2 cut(s) | 67, 140 |
| BspCNI | CTCAG | 2 cut(s) | 109, 361 |
| BsrDI | GCAATG | 1 cut(s) | 31 |
| Bst4CI | ACNGT | 1 cut(s) | 327 |
| BstC8I | GCNNGC | 2 cut(s) | 65, 72 |
| BstDEI | CTNAG | 2 cut(s) | 117, 369 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 96 |
| BstNSI | RCATGY | 1 cut(s) | 132 |
| BstSFI | CTRYAG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 2 cut(s) | 344, 359 |
| Bsu36I | CCTNAGG | 1 cut(s) | 369 |
| BsuRI | GGCC | 2 cut(s) | 67, 140 |
| BtgZI | GCGATG | 1 cut(s) | 89 |
| BtsI | GCAGTG | 2 cut(s) | 26, 129 |
| BtsIMutI | CAGTG | 3 cut(s) | 26, 129, 332 |
| Cac8I | GCNNGC | 2 cut(s) | 65, 72 |
| Csp6I | GTAC | 1 cut(s) | 52 |
| CviAII | CATG | 2 cut(s) | 129, 343 |
| CviJI | RGCY | 7 cut(s) | 67, 84, 116, 140, 176, 335, 350 |
| CviKI_1 | RGCY | 7 cut(s) | 67, 84, 116, 140, 176, 335, 350 |
| CviQI | GTAC | 1 cut(s) | 52 |
| DdeI | CTNAG | 2 cut(s) | 117, 369 |
| DraI | TTTAAA | 1 cut(s) | 145 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 238 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 238 |
| Eco147I | AGGCCT | 1 cut(s) | 140 |
| Eco81I | CCTNAGG | 1 cut(s) | 369 |
| FaeI | CATG | 2 cut(s) | 132, 346 |
| FaqI | GGGAC | 3 cut(s) | 199, 244, 264 |
| FatI | CATG | 2 cut(s) | 128, 342 |
| FauI | CCCGC | 1 cut(s) | 294 |
| Fnu4HI | GCNGC | 3 cut(s) | 68, 333, 348 |
| Fsp4HI | GCNGC | 3 cut(s) | 68, 333, 348 |
| FspBI | CTAG | 1 cut(s) | 357 |
| GluI | GCNGC | 3 cut(s) | 68, 333, 348 |
| GsaI | CCCAGC | 1 cut(s) | 176 |
| HaeIII | GGCC | 2 cut(s) | 67, 140 |
| Hin1II | CATG | 2 cut(s) | 132, 346 |
| HinfI | GANTC | 1 cut(s) | 191 |
| HphI | GGTGA | 1 cut(s) | 286 |
| HpyAV | CCTTC | 3 cut(s) | 8, 221, 405 |
| HpyCH4III | ACNGT | 1 cut(s) | 327 |
| HpyCH4IV | ACGT | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 4 cut(s) | 36, 321, 332, 413 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 96 |
| HpyF3I | CTNAG | 2 cut(s) | 117, 369 |
| HpySE526I | ACGT | 1 cut(s) | 253 |
| Hsp92II | CATG | 2 cut(s) | 132, 346 |
| LpnPI | CCDG | 8 cut(s) | 10, 33, 49, 56, 119, 186, 233, 381 |
| Lsp1109I | GCAGC | 2 cut(s) | 344, 359 |
| MaeI | CTAG | 1 cut(s) | 357 |
| MaeII | ACGT | 1 cut(s) | 253 |
| MboII | GAAGA | 1 cut(s) | 381 |
| MfeI | CAATTG | 2 cut(s) | 197, 212 |
| MluCI | AATT | 4 cut(s) | 146, 197, 212, 450 |
| MmeI | TCCRAC | 1 cut(s) | 451 |
| MnlI | CCTC | 4 cut(s) | 95, 112, 265, 364 |
| MseI | TTAA | 2 cut(s) | 144, 381 |
| MunI | CAATTG | 2 cut(s) | 197, 212 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 96 |
| NlaIII | CATG | 2 cut(s) | 132, 346 |
| NspI | RCATGY | 1 cut(s) | 132 |
| PceI | AGGCCT | 1 cut(s) | 140 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| PkrI | GCNGC | 3 cut(s) | 69, 334, 349 |
| PspFI | CCCAGC | 1 cut(s) | 172 |
| RsaI | GTAC | 1 cut(s) | 53 |
| RsaNI | GTAC | 1 cut(s) | 52 |
| SaqAI | TTAA | 2 cut(s) | 144, 381 |
| SatI | GCNGC | 3 cut(s) | 68, 333, 348 |
| SetI | ASST | 9 cut(s) | 108, 118, 178, 256, 276, 337, 352, 380, 433 |
| SfcI | CTRYAG | 1 cut(s) | 177 |
| Sse9I | AATT | 4 cut(s) | 146, 197, 212, 450 |
| SseBI | AGGCCT | 1 cut(s) | 140 |
| SsiI | CCGC | 2 cut(s) | 68, 301 |
| SspMI | CTAG | 1 cut(s) | 357 |
| StuI | AGGCCT | 1 cut(s) | 140 |
| TaaI | ACNGT | 1 cut(s) | 327 |
| TaiI | ACGT | 1 cut(s) | 256 |
| TasI | AATT | 4 cut(s) | 146, 197, 212, 450 |
| TauI | GCSGC | 1 cut(s) | 70 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| Tru1I | TTAA | 2 cut(s) | 144, 381 |
| Tru9I | TTAA | 2 cut(s) | 144, 381 |
| TscAI | CASTG | 3 cut(s) | 26, 129, 332 |
| TseI | GCWGC | 2 cut(s) | 332, 347 |
| TspDTI | ATGAA | 3 cut(s) | 20, 194, 299 |
| TspGWI | ACGGA | 1 cut(s) | 203 |
| TspRI | CASTG | 3 cut(s) | 26, 129, 332 |
| XapI | RAATTY | 1 cut(s) | 146 |
| XceI | RCATGY | 1 cut(s) | 132 |
| XspI | CTAG | 1 cut(s) | 357 |