Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 342 - 594 | 1.3e-28 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1525, 1901 |
| AccI | GTMKAC | 4 cut(s) | 482, 746, 1089, 1180 |
| AciI | CCGC | 4 cut(s) | 559, 1523, 1595, 1622 |
| AclWI | GGATC | 4 cut(s) | 173, 1373, 1409, 1422 |
| AcsI | RAATTY | 3 cut(s) | 25, 50, 646 |
| AcuI | CTGAAG | 2 cut(s) | 497, 1526 |
| AcvI | CACGTG | 1 cut(s) | 72 |
| AfaI | GTAC | 3 cut(s) | 187, 328, 1876 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1441, 1442, 1884 |
| AflIII | ACRYGT | 1 cut(s) | 125 |
| AgsI | TTSAA | 8 cut(s) | 287, 350, 586, 1231, 1270, 1618, 1648, 1855 |
| AjnI | CCWGG | 4 cut(s) | 161, 754, 1174, 2136 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 995, 1027, 1640, 1672, 2044, 2076 |
| AluBI | AGCT | 8 cut(s) | 37, 1273, 1374, 1643, 1819, 1940, 1968, 1978 |
| AluI | AGCT | 8 cut(s) | 37, 1273, 1374, 1643, 1819, 1940, 1968, 1978 |
| Alw21I | GWGCWC | 2 cut(s) | 689, 1734 |
| Alw26I | GTCTC | 2 cut(s) | 377, 1059 |
| Alw44I | GTGCAC | 1 cut(s) | 1730 |
| AlwI | GGATC | 4 cut(s) | 173, 1373, 1409, 1422 |
| Ama87I | CYCGRG | 1 cut(s) | 690 |
| AoxI | GGCC | 3 cut(s) | 890, 1017, 1064 |
| ApaLI | GTGCAC | 1 cut(s) | 1730 |
| ApeKI | GCWGC | 2 cut(s) | 1757, 1807 |
| ApoI | RAATTY | 3 cut(s) | 25, 50, 646 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 575 |
| AspA2I | CCTAGG | 1 cut(s) | 1418 |
| AspS9I | GGNCC | 6 cut(s) | 59, 341, 474, 890, 1018, 1065 |
| AsuC2I | CCSGG | 2 cut(s) | 691, 692 |
| AsuHPI | GGTGA | 6 cut(s) | 112, 164, 454, 1012, 1143, 1369 |
| AvaI | CYCGRG | 1 cut(s) | 690 |
| AvaII | GGWCC | 3 cut(s) | 59, 341, 474 |
| AvrII | CCTAGG | 1 cut(s) | 1418 |
| AxyI | CCTNAGG | 1 cut(s) | 1044 |
| BaeGI | GKGCMC | 1 cut(s) | 1734 |
| BamHI | GGATCC | 1 cut(s) | 1414 |
| BbrPI | CACGTG | 1 cut(s) | 72 |
| BbsI | GAAGAC | 1 cut(s) | 1901 |
| Bbv12I | GWGCWC | 2 cut(s) | 689, 1734 |
| BbvI | GCAGC | 2 cut(s) | 1769, 1794 |
| BccI | CCATC | 7 cut(s) | 464, 584, 890, 1330, 1960, 2008, 2059 |
| BceAI | ACGGC | 2 cut(s) | 767, 1466 |
| BciT130I | CCWGG | 4 cut(s) | 163, 756, 1176, 2138 |
| BclI | TGATCA | 2 cut(s) | 193, 493 |
| BcnI | CCSGG | 2 cut(s) | 691, 692 |
| BcoDI | GTCTC | 2 cut(s) | 377, 1059 |
| BfaI | CTAG | 5 cut(s) | 183, 776, 1419, 1572, 2049 |
| BfmI | CTRYAG | 1 cut(s) | 1812 |
| BfuAI | ACCTGC | 2 cut(s) | 1525, 1901 |
| BglII | AGATCT | 1 cut(s) | 573 |
| BisI | GCNGC | 3 cut(s) | 560, 1758, 1808 |
| BlnI | CCTAGG | 1 cut(s) | 1418 |
| BlsI | GCNGC | 3 cut(s) | 561, 1759, 1809 |
| Bme1390I | CCNGG | 6 cut(s) | 163, 691, 692, 756, 1176, 2138 |
| Bme18I | GGWCC | 3 cut(s) | 59, 341, 474 |
| BmeT110I | CYCGRG | 1 cut(s) | 690 |
| BmgT120I | GGNCC | 6 cut(s) | 59, 341, 474, 890, 1018, 1065 |
| BmiI | GGNNCC | 7 cut(s) | 342, 343, 475, 891, 1416, 1569, 1871 |
| BmrFI | CCNGG | 6 cut(s) | 163, 691, 692, 756, 1176, 2138 |
| BmsI | GCATC | 2 cut(s) | 7, 1129 |
| BpiI | GAAGAC | 1 cut(s) | 1901 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2030, 2062 |
| BpmI | CTGGAG | 1 cut(s) | 777 |
| BpuEI | CTTGAG | 2 cut(s) | 233, 1926 |
| BpuMI | CCSGG | 2 cut(s) | 691, 692 |
| BsaAI | YACGTR | 3 cut(s) | 72, 126, 1960 |
| BsaJI | CCNNGG | 6 cut(s) | 162, 690, 1383, 1418, 1494, 1879 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 263, 293, 833, 863, 1228, 1258 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1441, 1442, 1884 |
| Bse1I | ACTGG | 3 cut(s) | 102, 708, 2173 |
| Bse21I | CCTNAGG | 1 cut(s) | 1044 |
| Bse3DI | GCAATG | 1 cut(s) | 1640 |
| BseBI | CCWGG | 4 cut(s) | 163, 756, 1176, 2138 |
| BseDI | CCNNGG | 6 cut(s) | 162, 690, 1383, 1418, 1494, 1879 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1441, 1442, 1884 |
| BseMI | GCAATG | 1 cut(s) | 1640 |
| BseMII | CTCAG | 4 cut(s) | 77, 1058, 1070, 1915 |
| BseNI | ACTGG | 3 cut(s) | 102, 708, 2173 |
| BseRI | GAGGAG | 7 cut(s) | 284, 818, 857, 1249, 1252, 1255, 1850 |
| BseSI | GKGCMC | 1 cut(s) | 1734 |
| BseXI | GCAGC | 2 cut(s) | 1769, 1794 |
| BseYI | CCCAGC | 2 cut(s) | 37, 674 |
| BshFI | GGCC | 3 cut(s) | 892, 1019, 1066 |
| BsiHKAI | GWGCWC | 2 cut(s) | 689, 1734 |
| BsiHKCI | CYCGRG | 1 cut(s) | 690 |
| BsiSI | CCGG | 1 cut(s) | 691 |
| BslFI | GGGAC | 2 cut(s) | 327, 608 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1441, 1442, 1884 |
| BsmAI | GTCTC | 2 cut(s) | 377, 1059 |
| BsmBI | CGTCTC | 1 cut(s) | 377 |
| BsmFI | GGGAC | 2 cut(s) | 327, 608 |
| BsnI | GGCC | 3 cut(s) | 892, 1019, 1066 |
| BsoBI | CYCGRG | 1 cut(s) | 690 |
| Bsp1286I | GDGCHC | 2 cut(s) | 689, 1734 |
| Bsp143I | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| BspACI | CCGC | 4 cut(s) | 559, 1523, 1595, 1622 |
| BspANI | GGCC | 3 cut(s) | 892, 1019, 1066 |
| BspCNI | CTCAG | 4 cut(s) | 76, 1057, 1069, 1914 |
| BspHI | TCATGA | 1 cut(s) | 1368 |
| BspLI | GGNNCC | 7 cut(s) | 342, 343, 475, 891, 1416, 1569, 1871 |
| BspMI | ACCTGC | 2 cut(s) | 1525, 1901 |
| BspPI | GGATC | 4 cut(s) | 173, 1373, 1409, 1422 |
| BsrDI | GCAATG | 1 cut(s) | 1640 |
| BsrI | ACTGG | 3 cut(s) | 102, 708, 2173 |
| BssECI | CCNNGG | 6 cut(s) | 162, 690, 1383, 1418, 1494, 1879 |
| BssMI | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| BssT1I | CCWWGG | 2 cut(s) | 1418, 1879 |
| Bst2UI | CCWGG | 4 cut(s) | 163, 756, 1176, 2138 |
| Bst4CI | ACNGT | 5 cut(s) | 790, 831, 1000, 1387, 1874 |
| Bst6I | CTCTTC | 2 cut(s) | 1226, 1697 |
| BstBAI | YACGTR | 3 cut(s) | 72, 126, 1960 |
| BstC8I | GCNNGC | 3 cut(s) | 35, 624, 1521 |
| BstDEI | CTNAG | 9 cut(s) | 63, 519, 627, 1044, 1056, 1820, 1830, 1901, 2019 |
| BstDSI | CCRYGG | 1 cut(s) | 1383 |
| BstKTI | GATC | 7 cut(s) | 181, 196, 496, 576, 1149, 1368, 1417 |
| BstMAI | GTCTC | 2 cut(s) | 377, 1059 |
| BstMBI | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 544, 1816, 2147 |
| BstNI | CCWGG | 4 cut(s) | 163, 756, 1176, 2138 |
| BstNSI | RCATGY | 1 cut(s) | 551 |
| BstSCI | CCNGG | 6 cut(s) | 161, 689, 690, 754, 1174, 2136 |
| BstSFI | CTRYAG | 1 cut(s) | 1812 |
| BstSLI | GKGCMC | 1 cut(s) | 1734 |
| BstV1I | GCAGC | 2 cut(s) | 1769, 1794 |
| BstV2I | GAAGAC | 1 cut(s) | 1901 |
| BstX2I | RGATCY | 2 cut(s) | 573, 1414 |
| BstYI | RGATCY | 2 cut(s) | 573, 1414 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1044 |
| BsuRI | GGCC | 3 cut(s) | 892, 1019, 1066 |
| BtgI | CCRYGG | 1 cut(s) | 1383 |
| BveI | ACCTGC | 2 cut(s) | 1525, 1901 |
| Cac8I | GCNNGC | 3 cut(s) | 35, 624, 1521 |
| CciI | TCATGA | 1 cut(s) | 1368 |
| Cfr13I | GGNCC | 6 cut(s) | 59, 341, 474, 890, 1018, 1065 |
| Cfr9I | CCCGGG | 1 cut(s) | 690 |
| CseI | GACGC | 1 cut(s) | 147 |
| Csp6I | GTAC | 3 cut(s) | 186, 327, 1875 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 318, 353 |
| CviAII | CATG | 7 cut(s) | 138, 548, 1279, 1369, 1735, 1790, 2122 |
| CviQI | GTAC | 3 cut(s) | 186, 327, 1875 |
| DdeI | CTNAG | 9 cut(s) | 63, 519, 627, 1044, 1056, 1820, 1830, 1901, 2019 |
| DpnI | GATC | 7 cut(s) | 180, 195, 495, 575, 1148, 1367, 1416 |
| DpnII | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| DraI | TTTAAA | 1 cut(s) | 49 |
| Eam1104I | CTCTTC | 2 cut(s) | 1226, 1697 |
| EarI | CTCTTC | 2 cut(s) | 1226, 1697 |
| EciI | GGCGGA | 1 cut(s) | 1538 |
| Eco130I | CCWWGG | 2 cut(s) | 1418, 1879 |
| Eco32I | GATATC | 1 cut(s) | 736 |
| Eco47I | GGWCC | 3 cut(s) | 59, 341, 474 |
| Eco57I | CTGAAG | 2 cut(s) | 497, 1526 |
| Eco72I | CACGTG | 1 cut(s) | 72 |
| Eco81I | CCTNAGG | 1 cut(s) | 1044 |
| Eco88I | CYCGRG | 1 cut(s) | 690 |
| EcoO109I | RGGNCCY | 2 cut(s) | 341, 474 |
| EcoRI | GAATTC | 1 cut(s) | 646 |
| EcoRII | CCWGG | 4 cut(s) | 161, 754, 1174, 2136 |
| EcoRV | GATATC | 1 cut(s) | 736 |
| EcoT14I | CCWWGG | 2 cut(s) | 1418, 1879 |
| EcoT22I | ATGCAT | 1 cut(s) | 2007 |
| ErhI | CCWWGG | 2 cut(s) | 1418, 1879 |
| Esp3I | CGTCTC | 1 cut(s) | 377 |
| FaeI | CATG | 7 cut(s) | 141, 551, 1282, 1372, 1738, 1793, 2125 |
| FaqI | GGGAC | 2 cut(s) | 327, 608 |
| FatI | CATG | 7 cut(s) | 137, 547, 1278, 1368, 1734, 1789, 2121 |
| FbaI | TGATCA | 2 cut(s) | 193, 493 |
| FblI | GTMKAC | 4 cut(s) | 482, 746, 1089, 1180 |
| Fnu4HI | GCNGC | 3 cut(s) | 560, 1758, 1808 |
| Fsp4HI | GCNGC | 3 cut(s) | 560, 1758, 1808 |
| FspBI | CTAG | 5 cut(s) | 183, 776, 1419, 1572, 2049 |
| GluI | GCNGC | 3 cut(s) | 560, 1758, 1808 |
| GsaI | CCCAGC | 2 cut(s) | 41, 678 |
| GsuI | CTGGAG | 1 cut(s) | 777 |
| HaeIII | GGCC | 3 cut(s) | 892, 1019, 1066 |
| HapII | CCGG | 1 cut(s) | 691 |
| HgaI | GACGC | 1 cut(s) | 147 |
| Hin1II | CATG | 7 cut(s) | 141, 551, 1282, 1372, 1738, 1793, 2125 |
| HincII | GTYRAC | 5 cut(s) | 452, 483, 747, 1036, 1181 |
| HindII | GTYRAC | 5 cut(s) | 452, 483, 747, 1036, 1181 |
| HindIII | AAGCTT | 2 cut(s) | 1271, 1641 |
| HinfI | GANTC | 8 cut(s) | 82, 1060, 1460, 1601, 1897, 2045, 2056, 2112 |
| HpaII | CCGG | 1 cut(s) | 691 |
| HphI | GGTGA | 6 cut(s) | 112, 164, 454, 1012, 1143, 1369 |
| Hpy188I | TCNGA | 8 cut(s) | 193, 802, 982, 1059, 1192, 1999, 2091, 2117 |
| Hpy188III | TCNNGA | 7 cut(s) | 731, 766, 776, 1136, 1369, 1506, 2049 |
| Hpy99I | CGWCG | 3 cut(s) | 748, 751, 1441 |
| HpyAV | CCTTC | 5 cut(s) | 521, 580, 832, 2089, 2093 |
| HpyCH4III | ACNGT | 5 cut(s) | 790, 831, 1000, 1387, 1874 |
| HpyCH4IV | ACGT | 7 cut(s) | 71, 125, 386, 749, 1038, 1083, 1959 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 544, 1816, 2147 |
| HpyF3I | CTNAG | 9 cut(s) | 63, 519, 627, 1044, 1056, 1820, 1830, 1901, 2019 |
| HpySE526I | ACGT | 7 cut(s) | 71, 125, 386, 749, 1038, 1083, 1959 |
| Hsp92II | CATG | 7 cut(s) | 141, 551, 1282, 1372, 1738, 1793, 2125 |
| KflI | GGGWCCC | 1 cut(s) | 341 |
| Ksp22I | TGATCA | 2 cut(s) | 193, 493 |
| Kzo9I | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| LmnI | GCTCC | 5 cut(s) | 223, 692, 910, 1573, 1630 |
| Lsp1109I | GCAGC | 2 cut(s) | 1769, 1794 |
| LweI | GCATC | 2 cut(s) | 7, 1129 |
| MaeI | CTAG | 5 cut(s) | 183, 776, 1419, 1572, 2049 |
| MaeII | ACGT | 7 cut(s) | 71, 125, 386, 749, 1038, 1083, 1959 |
| MaeIII | GTNAC | 4 cut(s) | 170, 784, 1079, 1771 |
| MalI | GATC | 7 cut(s) | 180, 195, 495, 575, 1148, 1367, 1416 |
| MboI | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| MflI | RGATCY | 2 cut(s) | 573, 1414 |
| MhlI | GDGCHC | 2 cut(s) | 689, 1734 |
| MlyI | GAGTC | 2 cut(s) | 1891, 2039 |
| MmeI | TCCRAC | 3 cut(s) | 369, 377, 1865 |
| Mph1103I | ATGCAT | 1 cut(s) | 2007 |
| MroXI | GAANNNNTTC | 1 cut(s) | 575 |
| MseI | TTAA | 9 cut(s) | 48, 524, 599, 666, 1124, 1202, 1692, 1929, 2133 |
| MslI | CAYNNNNRTG | 2 cut(s) | 621, 1739 |
| MspI | CCGG | 1 cut(s) | 691 |
| MspR9I | CCNGG | 6 cut(s) | 163, 691, 692, 756, 1176, 2138 |
| MvaI | CCWGG | 4 cut(s) | 163, 756, 1176, 2138 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 544, 1816, 2147 |
| NciI | CCSGG | 2 cut(s) | 691, 692 |
| NdeII | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| NlaIII | CATG | 7 cut(s) | 141, 551, 1282, 1372, 1738, 1793, 2125 |
| NlaIV | GGNNCC | 7 cut(s) | 342, 343, 475, 891, 1416, 1569, 1871 |
| NmeAIII | GCCGAG | 1 cut(s) | 1519 |
| NmuCI | GTSAC | 1 cut(s) | 170 |
| NsiI | ATGCAT | 1 cut(s) | 2007 |
| NspI | RCATGY | 1 cut(s) | 551 |
| PagI | TCATGA | 1 cut(s) | 1368 |
| PdmI | GAANNNNTTC | 1 cut(s) | 575 |
| PfeI | GAWTC | 6 cut(s) | 82, 1060, 1460, 1601, 2056, 2112 |
| PkrI | GCNGC | 3 cut(s) | 561, 1759, 1809 |
| PleI | GAGTC | 2 cut(s) | 1891, 2039 |
| PmaCI | CACGTG | 1 cut(s) | 72 |
| PmlI | CACGTG | 1 cut(s) | 72 |
| PpsI | GAGTC | 2 cut(s) | 1891, 2039 |
| Ppu21I | YACGTR | 3 cut(s) | 72, 126, 1960 |
| PpuMI | RGGWCCY | 2 cut(s) | 341, 474 |
| Psp5II | RGGWCCY | 2 cut(s) | 341, 474 |
| Psp6I | CCWGG | 4 cut(s) | 161, 754, 1174, 2136 |
| PspCI | CACGTG | 1 cut(s) | 72 |
| PspFI | CCCAGC | 2 cut(s) | 37, 674 |
| PspGI | CCWGG | 4 cut(s) | 161, 754, 1174, 2136 |
| PspN4I | GGNNCC | 7 cut(s) | 342, 343, 475, 891, 1416, 1569, 1871 |
| PspPI | GGNCC | 6 cut(s) | 59, 341, 474, 890, 1018, 1065 |
| PspPPI | RGGWCCY | 2 cut(s) | 341, 474 |
| PsuI | RGATCY | 2 cut(s) | 573, 1414 |
| RsaI | GTAC | 3 cut(s) | 187, 328, 1876 |
| RsaNI | GTAC | 3 cut(s) | 186, 327, 1875 |
| RseI | CAYNNNNRTG | 2 cut(s) | 621, 1739 |
| SalI | GTCGAC | 3 cut(s) | 481, 745, 1179 |
| SaqAI | TTAA | 9 cut(s) | 48, 524, 599, 666, 1124, 1202, 1692, 1929, 2133 |
| SatI | GCNGC | 3 cut(s) | 560, 1758, 1808 |
| Sau3AI | GATC | 7 cut(s) | 178, 193, 493, 573, 1146, 1365, 1414 |
| Sau96I | GGNCC | 6 cut(s) | 59, 341, 474, 890, 1018, 1065 |
| SchI | GAGTC | 2 cut(s) | 1891, 2039 |
| ScrFI | CCNGG | 6 cut(s) | 163, 691, 692, 756, 1176, 2138 |
| SduI | GDGCHC | 2 cut(s) | 689, 1734 |
| SfaNI | GCATC | 2 cut(s) | 7, 1129 |
| SfcI | CTRYAG | 1 cut(s) | 1812 |
| SgrDI | CGTCGACG | 1 cut(s) | 745 |
| SinI | GGWCC | 3 cut(s) | 59, 341, 474 |
| SmaI | CCCGGG | 1 cut(s) | 692 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 621, 1739 |
| SmlI | CTYRAG | 2 cut(s) | 212, 1941 |
| SmoI | CTYRAG | 2 cut(s) | 212, 1941 |
| SsiI | CCGC | 4 cut(s) | 559, 1523, 1595, 1622 |
| SspI | AATATT | 1 cut(s) | 772 |
| SspMI | CTAG | 5 cut(s) | 183, 776, 1419, 1572, 2049 |
| StyD4I | CCNGG | 6 cut(s) | 161, 689, 690, 754, 1174, 2136 |
| StyI | CCWWGG | 2 cut(s) | 1418, 1879 |
| TaaI | ACNGT | 5 cut(s) | 790, 831, 1000, 1387, 1874 |
| TaiI | ACGT | 7 cut(s) | 74, 128, 389, 752, 1041, 1086, 1962 |
| TaqI | TCGA | 6 cut(s) | 482, 730, 746, 1180, 1439, 1507 |
| TatI | WGTACW | 1 cut(s) | 326 |
| TauI | GCSGC | 1 cut(s) | 562 |
| TfiI | GAWTC | 6 cut(s) | 82, 1060, 1460, 1601, 2056, 2112 |
| Tru1I | TTAA | 9 cut(s) | 48, 524, 599, 666, 1124, 1202, 1692, 1929, 2133 |
| Tru9I | TTAA | 9 cut(s) | 48, 524, 599, 666, 1124, 1202, 1692, 1929, 2133 |
| TseFI | GTSAC | 1 cut(s) | 170 |
| TseI | GCWGC | 2 cut(s) | 1757, 1807 |
| Tsp45I | GTSAC | 1 cut(s) | 170 |
| TspDTI | ATGAA | 7 cut(s) | 17, 605, 711, 1007, 1390, 1715, 2048 |
| TspGWI | ACGGA | 2 cut(s) | 262, 897 |
| TspMI | CCCGGG | 1 cut(s) | 690 |
| VneI | GTGCAC | 1 cut(s) | 1730 |
| VpaK11BI | GGWCC | 3 cut(s) | 59, 341, 474 |
| XapI | RAATTY | 3 cut(s) | 25, 50, 646 |
| XbaI | TCTAGA | 2 cut(s) | 775, 2048 |
| XceI | RCATGY | 1 cut(s) | 551 |
| XmaI | CCCGGG | 1 cut(s) | 690 |
| XmaJI | CCTAGG | 1 cut(s) | 1418 |
| XmiI | GTMKAC | 4 cut(s) | 482, 746, 1089, 1180 |
| XmnI | GAANNNNTTC | 1 cut(s) | 575 |
| XspI | CTAG | 5 cut(s) | 183, 776, 1419, 1572, 2049 |
| Zsp2I | ATGCAT | 1 cut(s) | 2007 |