Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 101 |
| AciI | CCGC | 5 cut(s) | 9, 34, 101, 115, 128 |
| AluBI | AGCT | 3 cut(s) | 40, 49, 207 |
| AluI | AGCT | 3 cut(s) | 40, 49, 207 |
| Alw26I | GTCTC | 2 cut(s) | 90, 258 |
| ApeKI | GCWGC | 2 cut(s) | 40, 89 |
| AspLEI | GCGC | 1 cut(s) | 8 |
| AsuHPI | GGTGA | 2 cut(s) | 64, 115 |
| BbvI | GCAGC | 2 cut(s) | 27, 76 |
| BcoDI | GTCTC | 2 cut(s) | 90, 258 |
| BfaI | CTAG | 2 cut(s) | 93, 298 |
| BfoI | RGCGCY | 1 cut(s) | 9 |
| BisI | GCNGC | 5 cut(s) | 9, 41, 90, 116, 129 |
| BlpI | GCTNAGC | 1 cut(s) | 132 |
| BlsI | GCNGC | 5 cut(s) | 10, 42, 91, 117, 130 |
| BpmI | CTGGAG | 1 cut(s) | 65 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 1 cut(s) | 276 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseDI | CCNNGG | 1 cut(s) | 276 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseMII | CTCAG | 2 cut(s) | 110, 123 |
| BseXI | GCAGC | 2 cut(s) | 27, 76 |
| Bsh1236I | CGCG | 1 cut(s) | 101 |
| Bsh1285I | CGRYCG | 1 cut(s) | 175 |
| BsiEI | CGRYCG | 1 cut(s) | 175 |
| BsmAI | GTCTC | 2 cut(s) | 90, 258 |
| BsmBI | CGTCTC | 1 cut(s) | 90 |
| Bsp143I | GATC | 3 cut(s) | 172, 244, 294 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 132 |
| BspACI | CCGC | 5 cut(s) | 9, 34, 101, 115, 128 |
| BspCNI | CTCAG | 2 cut(s) | 111, 124 |
| BspFNI | CGCG | 1 cut(s) | 101 |
| BssECI | CCNNGG | 1 cut(s) | 276 |
| BssMI | GATC | 3 cut(s) | 172, 244, 294 |
| BssT1I | CCWWGG | 1 cut(s) | 276 |
| BstDEI | CTNAG | 3 cut(s) | 119, 132, 161 |
| BstFNI | CGCG | 1 cut(s) | 101 |
| BstH2I | RGCGCY | 1 cut(s) | 9 |
| BstHHI | GCGC | 1 cut(s) | 8 |
| BstKTI | GATC | 3 cut(s) | 175, 247, 297 |
| BstMAI | GTCTC | 2 cut(s) | 90, 258 |
| BstMBI | GATC | 3 cut(s) | 172, 244, 294 |
| BstMCI | CGRYCG | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 40, 46, 98 |
| BstUI | CGCG | 1 cut(s) | 101 |
| BstV1I | GCAGC | 2 cut(s) | 27, 76 |
| CfoI | GCGC | 1 cut(s) | 8 |
| CseI | GACGC | 1 cut(s) | 107 |
| CviJI | RGCY | 8 cut(s) | 40, 49, 89, 118, 131, 158, 193, 207 |
| CviKI_1 | RGCY | 8 cut(s) | 40, 49, 89, 118, 131, 158, 193, 207 |
| DdeI | CTNAG | 3 cut(s) | 119, 132, 161 |
| DpnI | GATC | 3 cut(s) | 174, 246, 296 |
| DpnII | GATC | 3 cut(s) | 172, 244, 294 |
| Eco130I | CCWWGG | 1 cut(s) | 276 |
| EcoT14I | CCWWGG | 1 cut(s) | 276 |
| ErhI | CCWWGG | 1 cut(s) | 276 |
| Esp3I | CGTCTC | 1 cut(s) | 90 |
| FaiI | YATR | 1 cut(s) | 204 |
| FauI | CCCGC | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 5 cut(s) | 9, 41, 90, 116, 129 |
| Fsp4HI | GCNGC | 5 cut(s) | 9, 41, 90, 116, 129 |
| FspBI | CTAG | 2 cut(s) | 93, 298 |
| GlaI | GCGC | 1 cut(s) | 7 |
| GluI | GCNGC | 5 cut(s) | 9, 41, 90, 116, 129 |
| GsuI | CTGGAG | 1 cut(s) | 65 |
| HaeII | RGCGCY | 1 cut(s) | 9 |
| HgaI | GACGC | 1 cut(s) | 107 |
| HhaI | GCGC | 1 cut(s) | 8 |
| Hin6I | GCGC | 1 cut(s) | 6 |
| HinP1I | GCGC | 1 cut(s) | 6 |
| HphI | GGTGA | 2 cut(s) | 64, 115 |
| Hpy188I | TCNGA | 2 cut(s) | 172, 229 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| Hpy99I | CGWCG | 1 cut(s) | 295 |
| HpyAV | CCTTC | 3 cut(s) | 10, 148, 211 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 40, 46, 98 |
| HpyF3I | CTNAG | 3 cut(s) | 119, 132, 161 |
| HspAI | GCGC | 1 cut(s) | 6 |
| Kzo9I | GATC | 3 cut(s) | 172, 244, 294 |
| LmnI | GCTCC | 2 cut(s) | 37, 46 |
| LpnPI | CCDG | 5 cut(s) | 29, 35, 50, 207, 245 |
| Lsp1109I | GCAGC | 2 cut(s) | 27, 76 |
| MaeI | CTAG | 2 cut(s) | 93, 298 |
| MalI | GATC | 3 cut(s) | 174, 246, 296 |
| MboI | GATC | 3 cut(s) | 172, 244, 294 |
| MboII | GAAGA | 2 cut(s) | 163, 254 |
| MluCI | AATT | 2 cut(s) | 60, 80 |
| MnlI | CCTC | 6 cut(s) | 13, 18, 48, 99, 135, 207 |
| MseI | TTAA | 1 cut(s) | 83 |
| MvnI | CGCG | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 40, 46, 98 |
| NdeII | GATC | 3 cut(s) | 172, 244, 294 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 20, 290 |
| PkrI | GCNGC | 5 cut(s) | 10, 42, 91, 117, 130 |
| Ple19I | CGATCG | 1 cut(s) | 175 |
| PvuI | CGATCG | 1 cut(s) | 175 |
| SaqAI | TTAA | 1 cut(s) | 83 |
| SatI | GCNGC | 5 cut(s) | 9, 41, 90, 116, 129 |
| Sau3AI | GATC | 3 cut(s) | 172, 244, 294 |
| SetI | ASST | 4 cut(s) | 42, 51, 209, 282 |
| Sse9I | AATT | 2 cut(s) | 60, 80 |
| SsiI | CCGC | 5 cut(s) | 9, 34, 101, 115, 128 |
| SspMI | CTAG | 2 cut(s) | 93, 298 |
| StyI | CCWWGG | 1 cut(s) | 276 |
| TaqI | TCGA | 2 cut(s) | 247, 293 |
| TasI | AATT | 2 cut(s) | 60, 80 |
| TauI | GCSGC | 3 cut(s) | 11, 118, 131 |
| Tru1I | TTAA | 1 cut(s) | 83 |
| Tru9I | TTAA | 1 cut(s) | 83 |
| TseI | GCWGC | 2 cut(s) | 40, 89 |
| TspDTI | ATGAA | 2 cut(s) | 164, 255 |
| XspI | CTAG | 2 cut(s) | 93, 298 |