ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcyI | GRCGYC | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 106 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 18 |
| AflIII | ACRYGT | 1 cut(s) | 107 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| AspLEI | GCGC | 1 cut(s) | 124 |
| AsuC2I | CCSGG | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 1 cut(s) | 77 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 3 cut(s) | 35, 62, 209 |
| BclI | TGATCA | 1 cut(s) | 58 |
| BcnI | CCSGG | 1 cut(s) | 53 |
| BfaI | CTAG | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BpuMI | CCSGG | 1 cut(s) | 53 |
| BsaAI | YACGTR | 2 cut(s) | 92, 108 |
| BsaHI | GRCGYC | 1 cut(s) | 22 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 66, 96 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 18 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 18 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BseYI | CCCAGC | 1 cut(s) | 181 |
| BsiSI | CCGG | 1 cut(s) | 52 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 18 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BssMI | GATC | 1 cut(s) | 58 |
| BssNI | GRCGYC | 1 cut(s) | 22 |
| BstACI | GRCGYC | 1 cut(s) | 22 |
| BstBAI | YACGTR | 2 cut(s) | 92, 108 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstHHI | GCGC | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 148, 178 |
| BstNSI | RCATGY | 2 cut(s) | 142, 176 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| CfoI | GCGC | 1 cut(s) | 124 |
| CseI | GACGC | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 105 |
| CviAII | CATG | 4 cut(s) | 62, 139, 173, 210 |
| CviJI | RGCY | 4 cut(s) | 56, 119, 181, 186 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 119, 181, 186 |
| CviQI | GTAC | 1 cut(s) | 105 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| FaeI | CATG | 4 cut(s) | 65, 142, 176, 213 |
| FaiI | YATR | 6 cut(s) | 63, 140, 158, 160, 174, 211 |
| FatI | CATG | 4 cut(s) | 61, 138, 172, 209 |
| FauNDI | CATATG | 1 cut(s) | 158 |
| FbaI | TGATCA | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| FspBI | CTAG | 1 cut(s) | 15 |
| GlaI | GCGC | 1 cut(s) | 123 |
| GluI | GCNGC | 1 cut(s) | 120 |
| GsaI | CCCAGC | 1 cut(s) | 185 |
| HapII | CCGG | 1 cut(s) | 52 |
| HgaI | GACGC | 1 cut(s) | 11 |
| HhaI | GCGC | 1 cut(s) | 124 |
| Hin1I | GRCGYC | 1 cut(s) | 22 |
| Hin1II | CATG | 4 cut(s) | 65, 142, 176, 213 |
| Hin6I | GCGC | 1 cut(s) | 122 |
| HinP1I | GCGC | 1 cut(s) | 122 |
| HpaII | CCGG | 1 cut(s) | 52 |
| HphI | GGTGA | 1 cut(s) | 77 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| HpyCH4IV | ACGT | 2 cut(s) | 91, 107 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 148, 178 |
| HpySE526I | ACGT | 2 cut(s) | 91, 107 |
| Hsp92I | GRCGYC | 1 cut(s) | 22 |
| Hsp92II | CATG | 4 cut(s) | 65, 142, 176, 213 |
| HspAI | GCGC | 1 cut(s) | 122 |
| Ksp22I | TGATCA | 1 cut(s) | 58 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LpnPI | CCDG | 3 cut(s) | 65, 167, 190 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeII | ACGT | 2 cut(s) | 91, 107 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MnlI | CCTC | 1 cut(s) | 156 |
| MslI | CAYNNNNRTG | 1 cut(s) | 66 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 52 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 148, 178 |
| NciI | CCSGG | 1 cut(s) | 53 |
| NdeI | CATATG | 1 cut(s) | 158 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 4 cut(s) | 65, 142, 176, 213 |
| NspI | RCATGY | 2 cut(s) | 142, 176 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| Ppu21I | YACGTR | 2 cut(s) | 92, 108 |
| PspFI | CCCAGC | 1 cut(s) | 181 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| RsaI | GTAC | 1 cut(s) | 106 |
| RsaNI | GTAC | 1 cut(s) | 105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 66 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SetI | ASST | 4 cut(s) | 94, 110, 121, 167 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 66 |
| SspMI | CTAG | 1 cut(s) | 15 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| TaiI | ACGT | 2 cut(s) | 94, 110 |
| TseI | GCWGC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 2 cut(s) | 111, 134 |
| XceI | RCATGY | 2 cut(s) | 142, 176 |
| XspI | CTAG | 1 cut(s) | 15 |