The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 180 | 2.3e-42 | TIR domain |
| TIR_2 | PF13676 | 23 - 118 | 1.7e-15 | TIR domain |
| NB-ARC | PF00931 | 205 - 367 | 1.1e-29 | NB-ARC domain |
| LRR_8 | PF13855 | 577 - 635 | 2.3e-09 | Leucine rich repeat |
| LRR_14 | PF23598 | 627 - 746 | 4e-10 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 864 - 1005 | 1.6e-18 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 531 |
| Acc16I | TGCGCA | 1 cut(s) | 1596 |
| Acc36I | ACCTGC | 2 cut(s) | 2130, 2893 |
| Acc65I | GGTACC | 1 cut(s) | 2522 |
| AccB1I | GGYRCC | 2 cut(s) | 2445, 2522 |
| AccI | GTMKAC | 3 cut(s) | 114, 672, 1168 |
| AciI | CCGC | 3 cut(s) | 812, 1482, 3089 |
| AclWI | GGATC | 6 cut(s) | 113, 344, 892, 1771, 1784, 2113 |
| AcoI | YGGCCR | 4 cut(s) | 471, 1479, 1627, 1646 |
| AcsI | RAATTY | 8 cut(s) | 382, 539, 586, 795, 2049, 2291, 2474, 2916 |
| AcyI | GRCGYC | 1 cut(s) | 528 |
| AfaI | GTAC | 8 cut(s) | 2035, 2096, 2120, 2524, 2709, 2858, 3107, 3261 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 3022 |
| AflII | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| AflIII | ACRYGT | 2 cut(s) | 712, 751 |
| AgeI | ACCGGT | 1 cut(s) | 2030 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1339 |
| AhlI | ACTAGT | 2 cut(s) | 1216, 2201 |
| AjiI | CACGTC | 1 cut(s) | 1652 |
| AjnI | CCWGG | 3 cut(s) | 909, 1737, 2647 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2775, 2807 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2545, 2577 |
| Alw21I | GWGCWC | 2 cut(s) | 724, 3332 |
| Alw26I | GTCTC | 5 cut(s) | 836, 1684, 2658, 2728, 2957 |
| Alw44I | GTGCAC | 1 cut(s) | 720 |
| AlwI | GGATC | 6 cut(s) | 113, 344, 892, 1771, 1784, 2113 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2500 |
| Ama87I | CYCGRG | 1 cut(s) | 1239 |
| AoxI | GGCC | 6 cut(s) | 3, 471, 1083, 1479, 1627, 1646 |
| ApaLI | GTGCAC | 1 cut(s) | 720 |
| ApeKI | GCWGC | 3 cut(s) | 209, 455, 1235 |
| ApoI | RAATTY | 8 cut(s) | 382, 539, 586, 795, 2049, 2291, 2474, 2916 |
| AsiGI | ACCGGT | 1 cut(s) | 2030 |
| Asp718I | GGTACC | 1 cut(s) | 2522 |
| AspLEI | GCGC | 2 cut(s) | 640, 1597 |
| AspS9I | GGNCC | 3 cut(s) | 814, 1083, 2882 |
| AsuC2I | CCSGG | 2 cut(s) | 1574, 2946 |
| AsuHPI | GGTGA | 8 cut(s) | 98, 451, 991, 1042, 2020, 2422, 2648, 2950 |
| AvaI | CYCGRG | 1 cut(s) | 1239 |
| AvaII | GGWCC | 2 cut(s) | 814, 2882 |
| BaeGI | GKGCMC | 3 cut(s) | 724, 1201, 1246 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2025, 2058 |
| BalI | TGGCCA | 2 cut(s) | 473, 1648 |
| BamHI | GGATCC | 1 cut(s) | 1776 |
| BanI | GGYRCC | 2 cut(s) | 2445, 2522 |
| BanII | GRGCYC | 1 cut(s) | 3332 |
| BauI | CACGAG | 1 cut(s) | 2534 |
| BbsI | GAAGAC | 5 cut(s) | 96, 318, 1380, 2118, 3156 |
| Bbv12I | GWGCWC | 2 cut(s) | 724, 3332 |
| BbvI | GCAGC | 3 cut(s) | 221, 442, 1247 |
| BceAI | ACGGC | 3 cut(s) | 647, 691, 1614 |
| BciT130I | CCWGG | 3 cut(s) | 911, 1739, 2649 |
| BciVI | GTATCC | 4 cut(s) | 781, 1570, 1661, 2264 |
| BclI | TGATCA | 4 cut(s) | 340, 499, 1965, 2044 |
| BcnI | CCSGG | 2 cut(s) | 1574, 2946 |
| BcoDI | GTCTC | 5 cut(s) | 836, 1684, 2658, 2728, 2957 |
| BcuI | ACTAGT | 2 cut(s) | 1216, 2201 |
| BfaI | CTAG | 8 cut(s) | 864, 1152, 1217, 1247, 1773, 1986, 2202, 3343 |
| BfmI | CTRYAG | 2 cut(s) | 787, 1674 |
| BfoI | RGCGCY | 1 cut(s) | 641 |
| BfrI | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| BfuAI | ACCTGC | 2 cut(s) | 2130, 2893 |
| BfuI | GTATCC | 4 cut(s) | 781, 1570, 1661, 2264 |
| BglII | AGATCT | 1 cut(s) | 169 |
| BisI | GCNGC | 4 cut(s) | 210, 456, 1236, 1482 |
| BlsI | GCNGC | 4 cut(s) | 211, 457, 1237, 1483 |
| Bme1390I | CCNGG | 5 cut(s) | 911, 1574, 1739, 2649, 2946 |
| Bme18I | GGWCC | 2 cut(s) | 814, 2882 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1339 |
| BmeT110I | CYCGRG | 1 cut(s) | 1239 |
| BmgBI | CACGTC | 1 cut(s) | 1652 |
| BmgT120I | GGNCC | 3 cut(s) | 814, 1083, 2882 |
| BmiI | GGNNCC | 4 cut(s) | 1778, 2447, 2524, 2562 |
| BmrFI | CCNGG | 5 cut(s) | 911, 1574, 1739, 2649, 2946 |
| BmsI | GCATC | 4 cut(s) | 1298, 1426, 1548, 2233 |
| BpiI | GAAGAC | 5 cut(s) | 96, 318, 1380, 2118, 3156 |
| BpmI | CTGGAG | 1 cut(s) | 1721 |
| BpuEI | CTTGAG | 2 cut(s) | 889, 1970 |
| BpuMI | CCSGG | 2 cut(s) | 1574, 2946 |
| Bsa29I | ATCGAT | 1 cut(s) | 2338 |
| BsaBI | GATNNNNATC | 1 cut(s) | 168 |
| BsaHI | GRCGYC | 1 cut(s) | 528 |
| BsaI | GGTCTC | 1 cut(s) | 2658 |
| BsaJI | CCNNGG | 3 cut(s) | 306, 1630, 2648 |
| BsaWI | WCCGGW | 2 cut(s) | 1711, 2030 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 3022 |
| Bse118I | RCCGGY | 1 cut(s) | 2030 |
| Bse1I | ACTGG | 2 cut(s) | 2399, 3257 |
| Bse3DI | GCAATG | 2 cut(s) | 2132, 2904 |
| Bse8I | GATNNNNATC | 1 cut(s) | 168 |
| BseBI | CCWGG | 3 cut(s) | 911, 1739, 2649 |
| BseCI | ATCGAT | 1 cut(s) | 2338 |
| BseDI | CCNNGG | 3 cut(s) | 306, 1630, 2648 |
| BseGI | GGATG | 8 cut(s) | 166, 1289, 1383, 1563, 2054, 2884, 3163, 3247 |
| BseJI | GATNNNNATC | 1 cut(s) | 168 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 3022 |
| BseMI | GCAATG | 2 cut(s) | 2132, 2904 |
| BseMII | CTCAG | 2 cut(s) | 2802, 2999 |
| BseNI | ACTGG | 2 cut(s) | 2399, 3257 |
| BseRI | GAGGAG | 4 cut(s) | 151, 851, 854, 890 |
| BseSI | GKGCMC | 3 cut(s) | 724, 1201, 1246 |
| BseXI | GCAGC | 3 cut(s) | 221, 442, 1247 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1416 |
| BshFI | GGCC | 6 cut(s) | 5, 473, 1085, 1481, 1629, 1648 |
| BshNI | GGYRCC | 2 cut(s) | 2445, 2522 |
| BshTI | ACCGGT | 1 cut(s) | 2030 |
| BshVI | ATCGAT | 1 cut(s) | 2338 |
| BsiEI | CGRYCG | 1 cut(s) | 1416 |
| BsiHKAI | GWGCWC | 2 cut(s) | 724, 3332 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1239 |
| BsiSI | CCGG | 5 cut(s) | 1573, 1712, 2031, 2390, 2945 |
| BslFI | GGGAC | 2 cut(s) | 2511, 3156 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 3022 |
| BsmAI | GTCTC | 5 cut(s) | 836, 1684, 2658, 2728, 2957 |
| BsmFI | GGGAC | 2 cut(s) | 2511, 3156 |
| BsnI | GGCC | 6 cut(s) | 5, 473, 1085, 1481, 1629, 1648 |
| Bso31I | GGTCTC | 1 cut(s) | 2658 |
| BsoBI | CYCGRG | 1 cut(s) | 1239 |
| Bsp1286I | GDGCHC | 4 cut(s) | 724, 1201, 1246, 3332 |
| Bsp1407I | TGTACA | 2 cut(s) | 2094, 2856 |
| Bsp19I | CCATGG | 1 cut(s) | 306 |
| BspACI | CCGC | 3 cut(s) | 812, 1482, 3089 |
| BspANI | GGCC | 6 cut(s) | 5, 473, 1085, 1481, 1629, 1648 |
| BspCNI | CTCAG | 2 cut(s) | 2803, 2998 |
| BspDI | ATCGAT | 1 cut(s) | 2338 |
| BspLI | GGNNCC | 4 cut(s) | 1778, 2447, 2524, 2562 |
| BspMAI | CTGCAG | 1 cut(s) | 1678 |
| BspMI | ACCTGC | 2 cut(s) | 2130, 2893 |
| BspPI | GGATC | 6 cut(s) | 113, 344, 892, 1771, 1784, 2113 |
| BspQI | GCTCTTC | 1 cut(s) | 850 |
| BspT107I | GGYRCC | 2 cut(s) | 2445, 2522 |
| BspTI | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| BspTNI | GGTCTC | 1 cut(s) | 2658 |
| BsrDI | GCAATG | 2 cut(s) | 2132, 2904 |
| BsrFI | RCCGGY | 1 cut(s) | 2030 |
| BsrGI | TGTACA | 2 cut(s) | 2094, 2856 |
| BsrI | ACTGG | 2 cut(s) | 2399, 3257 |
| BssAI | RCCGGY | 1 cut(s) | 2030 |
| BssECI | CCNNGG | 3 cut(s) | 306, 1630, 2648 |
| BssNI | GRCGYC | 1 cut(s) | 528 |
| BssSI | CACGAG | 1 cut(s) | 2534 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| Bst2BI | CACGAG | 1 cut(s) | 2534 |
| Bst2UI | CCWGG | 3 cut(s) | 911, 1739, 2649 |
| Bst4CI | ACNGT | 6 cut(s) | 112, 333, 2094, 2410, 2934, 3170 |
| Bst6I | CTCTTC | 8 cut(s) | 39, 645, 850, 1389, 2586, 2916, 2960, 3339 |
| BstACI | GRCGYC | 1 cut(s) | 528 |
| BstAFI | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| BstAUI | TGTACA | 2 cut(s) | 2094, 2856 |
| BstC8I | GCNNGC | 6 cut(s) | 453, 1505, 1627, 1706, 2387, 3043 |
| BstDEI | CTNAG | 6 cut(s) | 205, 287, 1826, 1958, 2811, 2985 |
| BstDSI | CCRYGG | 2 cut(s) | 306, 1630 |
| BstF5I | GGATG | 8 cut(s) | 166, 1289, 1383, 1563, 2054, 2884, 3163, 3247 |
| BstH2I | RGCGCY | 1 cut(s) | 641 |
| BstHHI | GCGC | 2 cut(s) | 640, 1597 |
| BstMAI | GTCTC | 5 cut(s) | 836, 1684, 2658, 2728, 2957 |
| BstMCI | CGRYCG | 1 cut(s) | 1416 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 206, 266, 602, 684, 1184, 1241, 2894 |
| BstNI | CCWGG | 3 cut(s) | 911, 1739, 2649 |
| BstNSI | RCATGY | 4 cut(s) | 410, 716, 728, 755 |
| BstSCI | CCNGG | 5 cut(s) | 909, 1572, 1737, 2647, 2944 |
| BstSFI | CTRYAG | 2 cut(s) | 787, 1674 |
| BstSLI | GKGCMC | 3 cut(s) | 724, 1201, 1246 |
| BstV1I | GCAGC | 3 cut(s) | 221, 442, 1247 |
| BstV2I | GAAGAC | 5 cut(s) | 96, 318, 1380, 2118, 3156 |
| BstX2I | RGATCY | 3 cut(s) | 169, 897, 1776 |
| BstYI | RGATCY | 3 cut(s) | 169, 897, 1776 |
| Bsu15I | ATCGAT | 1 cut(s) | 2338 |
| BsuI | GTATCC | 4 cut(s) | 781, 1570, 1661, 2264 |
| BsuRI | GGCC | 6 cut(s) | 5, 473, 1085, 1481, 1629, 1648 |
| BsuTUI | ATCGAT | 1 cut(s) | 2338 |
| BtgI | CCRYGG | 2 cut(s) | 306, 1630 |
| BtrI | CACGTC | 1 cut(s) | 1652 |
| BtsCI | GGATG | 8 cut(s) | 166, 1289, 1383, 1563, 2054, 2884, 3163, 3247 |
| BtsI | GCAGTG | 1 cut(s) | 657 |
| BtsIMutI | CAGTG | 3 cut(s) | 329, 657, 2939 |
| BveI | ACCTGC | 2 cut(s) | 2130, 2893 |
| Cac8I | GCNNGC | 6 cut(s) | 453, 1505, 1627, 1706, 2387, 3043 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2500 |
| CfoI | GCGC | 2 cut(s) | 640, 1597 |
| Cfr10I | RCCGGY | 1 cut(s) | 2030 |
| Cfr13I | GGNCC | 3 cut(s) | 814, 1083, 2882 |
| ClaI | ATCGAT | 1 cut(s) | 2338 |
| CseI | GACGC | 1 cut(s) | 1523 |
| Csp6I | GTAC | 8 cut(s) | 2034, 2095, 2119, 2523, 2708, 2857, 3106, 3260 |
| CspAI | ACCGGT | 1 cut(s) | 2030 |
| CviQI | GTAC | 8 cut(s) | 2034, 2095, 2119, 2523, 2708, 2857, 3106, 3260 |
| DdeI | CTNAG | 6 cut(s) | 205, 287, 1826, 1958, 2811, 2985 |
| DraI | TTTAAA | 1 cut(s) | 462 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1339 |
| EaeI | YGGCCR | 4 cut(s) | 471, 1479, 1627, 1646 |
| Eam1104I | CTCTTC | 8 cut(s) | 39, 645, 850, 1389, 2586, 2916, 2960, 3339 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1339 |
| EarI | CTCTTC | 8 cut(s) | 39, 645, 850, 1389, 2586, 2916, 2960, 3339 |
| EciI | GGCGGA | 2 cut(s) | 827, 3104 |
| Ecl136II | GAGCTC | 1 cut(s) | 3330 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco24I | GRGCYC | 1 cut(s) | 3332 |
| Eco31I | GGTCTC | 1 cut(s) | 2658 |
| Eco32I | GATATC | 3 cut(s) | 368, 2026, 2067 |
| Eco47I | GGWCC | 2 cut(s) | 814, 2882 |
| Eco53kI | GAGCTC | 1 cut(s) | 3330 |
| Eco88I | CYCGRG | 1 cut(s) | 1239 |
| EcoICRI | GAGCTC | 1 cut(s) | 3330 |
| EcoRII | CCWGG | 3 cut(s) | 909, 1737, 2647 |
| EcoRV | GATATC | 3 cut(s) | 368, 2026, 2067 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| EcoT22I | ATGCAT | 1 cut(s) | 1563 |
| EcoT38I | GRGCYC | 1 cut(s) | 3332 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1331, 1363 |
| FaqI | GGGAC | 2 cut(s) | 2511, 3156 |
| FauNDI | CATATG | 2 cut(s) | 2601, 2873 |
| FbaI | TGATCA | 4 cut(s) | 340, 499, 1965, 2044 |
| FblI | GTMKAC | 3 cut(s) | 114, 672, 1168 |
| Fnu4HI | GCNGC | 4 cut(s) | 210, 456, 1236, 1482 |
| FokI | GGATG | 8 cut(s) | 173, 1276, 1370, 1570, 2041, 2891, 3170, 3254 |
| FriOI | GRGCYC | 1 cut(s) | 3332 |
| Fsp4HI | GCNGC | 4 cut(s) | 210, 456, 1236, 1482 |
| FspBI | CTAG | 8 cut(s) | 864, 1152, 1217, 1247, 1773, 1986, 2202, 3343 |
| FspI | TGCGCA | 1 cut(s) | 1596 |
| GlaI | GCGC | 2 cut(s) | 639, 1596 |
| GluI | GCNGC | 4 cut(s) | 210, 456, 1236, 1482 |
| GsuI | CTGGAG | 1 cut(s) | 1721 |
| HaeII | RGCGCY | 1 cut(s) | 641 |
| HaeIII | GGCC | 6 cut(s) | 5, 473, 1085, 1481, 1629, 1648 |
| HapII | CCGG | 5 cut(s) | 1573, 1712, 2031, 2390, 2945 |
| HgaI | GACGC | 1 cut(s) | 1523 |
| HhaI | GCGC | 2 cut(s) | 640, 1597 |
| Hin1I | GRCGYC | 1 cut(s) | 528 |
| Hin6I | GCGC | 2 cut(s) | 638, 1595 |
| HinP1I | GCGC | 2 cut(s) | 638, 1595 |
| HincII | GTYRAC | 3 cut(s) | 115, 526, 2991 |
| HindII | GTYRAC | 3 cut(s) | 115, 526, 2991 |
| HindIII | AAGCTT | 3 cut(s) | 393, 1946, 2366 |
| HpaII | CCGG | 5 cut(s) | 1573, 1712, 2031, 2390, 2945 |
| HphI | GGTGA | 8 cut(s) | 98, 451, 991, 1042, 2020, 2422, 2648, 2950 |
| Hpy166II | GTNNAC | 8 cut(s) | 115, 526, 579, 673, 722, 1169, 2991, 3262 |
| Hpy8I | GTNNAC | 8 cut(s) | 115, 526, 579, 673, 722, 1169, 2991, 3262 |
| Hpy99I | CGWCG | 1 cut(s) | 920 |
| HpyCH4III | ACNGT | 6 cut(s) | 112, 333, 2094, 2410, 2934, 3170 |
| HpyCH4IV | ACGT | 4 cut(s) | 528, 918, 1059, 1651 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 206, 266, 602, 684, 1184, 1241, 2894 |
| HpyF3I | CTNAG | 6 cut(s) | 205, 287, 1826, 1958, 2811, 2985 |
| HpySE526I | ACGT | 4 cut(s) | 528, 918, 1059, 1651 |
| Hsp92I | GRCGYC | 1 cut(s) | 528 |
| HspAI | GCGC | 2 cut(s) | 638, 1595 |
| KpnI | GGTACC | 1 cut(s) | 2526 |
| Ksp22I | TGATCA | 4 cut(s) | 340, 499, 1965, 2044 |
| LguI | GCTCTTC | 1 cut(s) | 850 |
| LmnI | GCTCC | 2 cut(s) | 17, 2893 |
| Lsp1109I | GCAGC | 3 cut(s) | 221, 442, 1247 |
| LweI | GCATC | 4 cut(s) | 1298, 1426, 1548, 2233 |
| MaeI | CTAG | 8 cut(s) | 864, 1152, 1217, 1247, 1773, 1986, 2202, 3343 |
| MaeII | ACGT | 4 cut(s) | 528, 918, 1059, 1651 |
| MaeIII | GTNAC | 9 cut(s) | 559, 655, 1254, 1746, 1829, 2197, 2690, 2727, 3277 |
| MfeI | CAATTG | 2 cut(s) | 1173, 1389 |
| MflI | RGATCY | 3 cut(s) | 169, 897, 1776 |
| MhlI | GDGCHC | 4 cut(s) | 724, 1201, 1246, 3332 |
| MlsI | TGGCCA | 2 cut(s) | 473, 1648 |
| MluNI | TGGCCA | 2 cut(s) | 473, 1648 |
| MlyI | GAGTC | 6 cut(s) | 502, 584, 2108, 2497, 2633, 2902 |
| MmeI | TCCRAC | 6 cut(s) | 35, 670, 832, 2568, 3144, 3275 |
| Mox20I | TGGCCA | 2 cut(s) | 473, 1648 |
| Mph1103I | ATGCAT | 1 cut(s) | 1563 |
| MscI | TGGCCA | 2 cut(s) | 473, 1648 |
| MslI | CAYNNNNRTG | 4 cut(s) | 717, 1294, 1925, 2468 |
| Msp20I | TGGCCA | 2 cut(s) | 473, 1648 |
| MspCI | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| MspI | CCGG | 5 cut(s) | 1573, 1712, 2031, 2390, 2945 |
| MspR9I | CCNGG | 5 cut(s) | 911, 1574, 1739, 2649, 2946 |
| MunI | CAATTG | 2 cut(s) | 1173, 1389 |
| MvaI | CCWGG | 3 cut(s) | 911, 1739, 2649 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 206, 266, 602, 684, 1184, 1241, 2894 |
| NciI | CCSGG | 2 cut(s) | 1574, 2946 |
| NcoI | CCATGG | 1 cut(s) | 306 |
| NdeI | CATATG | 2 cut(s) | 2601, 2873 |
| NlaIV | GGNNCC | 4 cut(s) | 1778, 2447, 2524, 2562 |
| NmuCI | GTSAC | 2 cut(s) | 655, 1254 |
| NsbI | TGCGCA | 1 cut(s) | 1596 |
| NsiI | ATGCAT | 1 cut(s) | 1563 |
| NspI | RCATGY | 4 cut(s) | 410, 716, 728, 755 |
| PciI | ACATGT | 2 cut(s) | 712, 751 |
| PciSI | GCTCTTC | 1 cut(s) | 850 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 120, 2313 |
| PfeI | GAWTC | 8 cut(s) | 47, 221, 1076, 1115, 1472, 1693, 1954, 3320 |
| PfoI | TCCNGGA | 2 cut(s) | 909, 1572 |
| PinAI | ACCGGT | 1 cut(s) | 2030 |
| PkrI | GCNGC | 4 cut(s) | 211, 457, 1237, 1483 |
| Ple19I | CGATCG | 1 cut(s) | 1416 |
| PleI | GAGTC | 6 cut(s) | 502, 583, 2108, 2497, 2632, 2902 |
| PpsI | GAGTC | 6 cut(s) | 502, 583, 2108, 2497, 2632, 2902 |
| PscI | ACATGT | 2 cut(s) | 712, 751 |
| Psp124BI | GAGCTC | 1 cut(s) | 3332 |
| Psp6I | CCWGG | 3 cut(s) | 909, 1737, 2647 |
| PspGI | CCWGG | 3 cut(s) | 909, 1737, 2647 |
| PspN4I | GGNNCC | 4 cut(s) | 1778, 2447, 2524, 2562 |
| PspPI | GGNCC | 3 cut(s) | 814, 1083, 2882 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2664, 2696 |
| PstI | CTGCAG | 1 cut(s) | 1678 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2500 |
| PsuI | RGATCY | 3 cut(s) | 169, 897, 1776 |
| PvuI | CGATCG | 1 cut(s) | 1416 |
| RsaI | GTAC | 8 cut(s) | 2035, 2096, 2120, 2524, 2709, 2858, 3107, 3261 |
| RsaNI | GTAC | 8 cut(s) | 2034, 2095, 2119, 2523, 2708, 2857, 3106, 3260 |
| RseI | CAYNNNNRTG | 4 cut(s) | 717, 1294, 1925, 2468 |
| SacI | GAGCTC | 1 cut(s) | 3332 |
| SalI | GTCGAC | 1 cut(s) | 113 |
| SapI | GCTCTTC | 1 cut(s) | 850 |
| SatI | GCNGC | 4 cut(s) | 210, 456, 1236, 1482 |
| Sau96I | GGNCC | 3 cut(s) | 814, 1083, 2882 |
| SchI | GAGTC | 6 cut(s) | 502, 584, 2108, 2497, 2633, 2902 |
| ScrFI | CCNGG | 5 cut(s) | 911, 1574, 1739, 2649, 2946 |
| SduI | GDGCHC | 4 cut(s) | 724, 1201, 1246, 3332 |
| SfaNI | GCATC | 4 cut(s) | 1298, 1426, 1548, 2233 |
| SfcI | CTRYAG | 2 cut(s) | 787, 1674 |
| SinI | GGWCC | 2 cut(s) | 814, 2882 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 717, 1294, 1925, 2468 |
| SmlI | CTYRAG | 5 cut(s) | 131, 868, 1940, 1949, 2215 |
| SmoI | CTYRAG | 5 cut(s) | 131, 868, 1940, 1949, 2215 |
| SpeI | ACTAGT | 2 cut(s) | 1216, 2201 |
| SsiI | CCGC | 3 cut(s) | 812, 1482, 3089 |
| SspI | AATATT | 3 cut(s) | 324, 831, 1840 |
| SspMI | CTAG | 8 cut(s) | 864, 1152, 1217, 1247, 1773, 1986, 2202, 3343 |
| SstI | GAGCTC | 1 cut(s) | 3332 |
| StyD4I | CCNGG | 5 cut(s) | 909, 1572, 1737, 2647, 2944 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 6 cut(s) | 112, 333, 2094, 2410, 2934, 3170 |
| TaiI | ACGT | 4 cut(s) | 531, 921, 1062, 1654 |
| TaqI | TCGA | 8 cut(s) | 114, 166, 364, 1118, 1432, 2338, 2683, 3326 |
| TatI | WGTACW | 5 cut(s) | 2094, 2707, 2856, 3105, 3259 |
| TauI | GCSGC | 1 cut(s) | 1484 |
| TfiI | GAWTC | 8 cut(s) | 47, 221, 1076, 1115, 1472, 1693, 1954, 3320 |
| TscAI | CASTG | 3 cut(s) | 336, 664, 2939 |
| TseFI | GTSAC | 2 cut(s) | 655, 1254 |
| TseI | GCWGC | 3 cut(s) | 209, 455, 1235 |
| Tsp45I | GTSAC | 2 cut(s) | 655, 1254 |
| TspGWI | ACGGA | 3 cut(s) | 536, 1296, 1705 |
| TspRI | CASTG | 3 cut(s) | 336, 664, 2939 |
| Vha464I | CTTAAG | 3 cut(s) | 131, 1940, 2215 |
| VneI | GTGCAC | 1 cut(s) | 720 |
| VpaK11BI | GGWCC | 2 cut(s) | 814, 2882 |
| XapI | RAATTY | 8 cut(s) | 382, 539, 586, 795, 2049, 2291, 2474, 2916 |
| XceI | RCATGY | 4 cut(s) | 410, 716, 728, 755 |
| XmiI | GTMKAC | 3 cut(s) | 114, 672, 1168 |
| XspI | CTAG | 8 cut(s) | 864, 1152, 1217, 1247, 1773, 1986, 2202, 3343 |
| ZraI | GACGTC | 1 cut(s) | 529 |
| Zsp2I | ATGCAT | 1 cut(s) | 1563 |